RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 MRPL50Q8N5N7 158 aaKnown RBP19.69■□□□□ 0.74
SKA2-209ENST00000583976 RIPOR2Q9Y4F9 1068 aa19.69■□□□□ 0.74
SKA2-209ENST00000583976 MYH13Q9UKX3 1938 aa19.68■□□□□ 0.74
SKA2-209ENST00000583976 USP2O75604 605 aaPredicted RBP19.68■□□□□ 0.74
SKA2-209ENST00000583976 ZBTB48P10074 688 aaPredicted RBP19.68■□□□□ 0.74
SKA2-209ENST00000583976 PKN2Q16513 984 aaKnown RBP19.68■□□□□ 0.74
SKA2-209ENST00000583976 VGLL2Q8N8G2 317 aa19.68■□□□□ 0.74
SKA2-209ENST00000583976 CNKSR2Q8WXI2 1034 aa19.68■□□□□ 0.74
SKA2-209ENST00000583976 TCP10L2B9ZVM9 353 aa19.67■□□□□ 0.74
SKA2-209ENST00000583976 CRKP46108 304 aa19.67■□□□□ 0.74
SKA2-209ENST00000583976 IREB2P48200 963 aaKnown RBP19.67■□□□□ 0.74
SKA2-209ENST00000583976 SUPT20HL1Q3ZLR7 823 aa19.67■□□□□ 0.74
SKA2-209ENST00000583976 DZIP1LQ8IYY4 767 aaKnown RBP19.67■□□□□ 0.74
SKA2-209ENST00000583976 TEPSINQ96N21 525 aa19.67■□□□□ 0.74
SKA2-209ENST00000583976 TMEM39BQ9GZU3 492 aa19.67■□□□□ 0.74
SKA2-209ENST00000583976 ELP3Q9H9T3 547 aa19.67■□□□□ 0.74
SKA2-209ENST00000583976 SERPINA10Q9UK55 444 aa19.67■□□□□ 0.74
SKA2-209ENST00000583976 MROH5Q6ZUA9 1318 aa19.67■□□□□ 0.74
SKA2-209ENST00000583976 CACNB3P54284 484 aa19.66■□□□□ 0.74
SKA2-209ENST00000583976 CAP1Q01518 475 aa19.66■□□□□ 0.74
SKA2-209ENST00000583976 CRHR2Q13324 411 aa19.66■□□□□ 0.74
SKA2-209ENST00000583976 METTL24Q5JXM2 366 aa19.66■□□□□ 0.74
SKA2-209ENST00000583976 TRIM17Q9Y577 477 aa19.66■□□□□ 0.74
SKA2-209ENST00000583976 ZSWIM8A7E2V4 1837 aa19.66■□□□□ 0.74
SKA2-209ENST00000583976 ANKRD13AQ8IZ07 590 aa19.65■□□□□ 0.74
SKA2-209ENST00000583976 OPTNQ96CV9 577 aa19.65■□□□□ 0.74
SKA2-209ENST00000583976 PTPN18Q99952 460 aa19.65■□□□□ 0.74
SKA2-209ENST00000583976 ALDH1A1P00352 501 aa19.64■□□□□ 0.73
SKA2-209ENST00000583976 TNFAIP1Q13829 316 aa19.64■□□□□ 0.73
SKA2-209ENST00000583976 OTOP1Q7RTM1 612 aa19.64■□□□□ 0.73
SKA2-209ENST00000583976 FBXO33Q7Z6M2 555 aa19.64■□□□□ 0.73
SKA2-209ENST00000583976 SSH1Q8WYL5 1049 aa19.64■□□□□ 0.73
SKA2-209ENST00000583976 VGLL4Q14135 290 aa19.63■□□□□ 0.73
SKA2-209ENST00000583976 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.63■□□□□ 0.73
SKA2-209ENST00000583976 VPS37DQ86XT2 251 aa19.63■□□□□ 0.73
SKA2-209ENST00000583976 CD99L2Q8TCZ2 262 aa19.63■□□□□ 0.73
SKA2-209ENST00000583976 RBBP6Q7Z6E9 1792 aaKnown RBP19.62■□□□□ 0.73
SKA2-209ENST00000583976 PTPRCP08575 1304 aa19.62■□□□□ 0.73
SKA2-209ENST00000583976 BCAMP50895 628 aa19.62■□□□□ 0.73
SKA2-209ENST00000583976 PDE8BO95263 885 aa19.61■□□□□ 0.73
SKA2-209ENST00000583976 CT47B1P0C2W7 299 aaPredicted RBP19.61■□□□□ 0.73
SKA2-209ENST00000583976 INHBEP58166 350 aa19.61■□□□□ 0.73
SKA2-209ENST00000583976 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.61■□□□□ 0.73
SKA2-209ENST00000583976 BRI3BPQ8WY22 251 aa19.61■□□□□ 0.73
SKA2-209ENST00000583976 SMC4Q9NTJ3 1288 aa19.61■□□□□ 0.73
SKA2-209ENST00000583976 FRAT2O75474 233 aaPredicted RBP19.6■□□□□ 0.73
SKA2-209ENST00000583976 PRPF38BQ5VTL8 546 aaKnown RBP19.6■□□□□ 0.73
SKA2-209ENST00000583976 OTUD5Q96G74 571 aa19.6■□□□□ 0.73
SKA2-209ENST00000583976 MS4A4AQ96JQ5 239 aa19.6■□□□□ 0.73
SKA2-209ENST00000583976 USP44Q9H0E7 712 aa19.6■□□□□ 0.73
SKA2-209ENST00000583976 TESPA1A2RU30 521 aaPredicted RBP19.59■□□□□ 0.73
SKA2-209ENST00000583976 POTEFA5A3E0 1075 aa19.59■□□□□ 0.73
SKA2-209ENST00000583976 UNCXA6NJT0 531 aa19.59■□□□□ 0.73
SKA2-209ENST00000583976 FGFR2P21802 821 aa19.59■□□□□ 0.73
SKA2-209ENST00000583976 RFX5P48382 616 aaPredicted RBP19.59■□□□□ 0.73
SKA2-209ENST00000583976 PUM3Q15397 648 aaKnown RBP19.59■□□□□ 0.73
SKA2-209ENST00000583976 CAVIN4Q5BKX8 364 aa19.59■□□□□ 0.73
SKA2-209ENST00000583976 TEKT1Q969V4 418 aa19.59■□□□□ 0.73
SKA2-209ENST00000583976 RARSP54136 660 aaKnown RBP19.58■□□□□ 0.72
SKA2-209ENST00000583976 ALDH1L2Q3SY69 923 aa19.58■□□□□ 0.72
SKA2-209ENST00000583976 TBC1D22AQ8WUA7 517 aa19.58■□□□□ 0.72
SKA2-209ENST00000583976 SNCAIPQ9Y6H5 919 aa19.58■□□□□ 0.72
SKA2-209ENST00000583976 CCL15-CCL14A0A0B4J2E2 113 aa19.57■□□□□ 0.72
SKA2-209ENST00000583976 TNNI2P48788 182 aa19.57■□□□□ 0.72
SKA2-209ENST00000583976 CCL15Q16663 113 aa19.57■□□□□ 0.72
SKA2-209ENST00000583976 FAM43AQ8N2R8 423 aa19.57■□□□□ 0.72
SKA2-209ENST00000583976 ERO1AQ96HE7 468 aa19.57■□□□□ 0.72
SKA2-209ENST00000583976 APOBEC3HQ6NTF7 200 aaKnown RBP19.56■□□□□ 0.72
SKA2-209ENST00000583976 ZDHHC15Q96MV8 337 aa19.56■□□□□ 0.72
SKA2-209ENST00000583976 WRNIP1Q96S55 665 aa19.56■□□□□ 0.72
SKA2-209ENST00000583976 CSADQ9Y600 493 aa19.56■□□□□ 0.72
SKA2-209ENST00000583976 RPAP1Q9BWH6 1393 aaPredicted RBP19.56■□□□□ 0.72
SKA2-209ENST00000583976 KIF16BQ96L93 1317 aa19.55■□□□□ 0.72
SKA2-209ENST00000583976 SPDYE5A6NIY4 337 aa19.55■□□□□ 0.72
SKA2-209ENST00000583976 EYA2O00167 538 aa19.55■□□□□ 0.72
SKA2-209ENST00000583976 IFIT1P09914 478 aaKnown RBP19.55■□□□□ 0.72
SKA2-209ENST00000583976 MAP3K9P80192 1104 aa19.55■□□□□ 0.72
SKA2-209ENST00000583976 HDLBPQ00341 1268 aaKnown RBP19.55■□□□□ 0.72
SKA2-209ENST00000583976 TAF1CQ15572 869 aaPredicted RBP19.55■□□□□ 0.72
SKA2-209ENST00000583976 OTUD7BQ6GQQ9 843 aa19.55■□□□□ 0.72
SKA2-209ENST00000583976 SIL1Q9H173 461 aa19.55■□□□□ 0.72
SKA2-209ENST00000583976 PTPN22Q9Y2R2 807 aa19.55■□□□□ 0.72
SKA2-209ENST00000583976 KIAA0100Q14667 2235 aaKnown RBP19.54■□□□□ 0.72
SKA2-209ENST00000583976 BCAR3O75815 825 aa19.54■□□□□ 0.72
SKA2-209ENST00000583976 SP3Q02447 781 aa19.54■□□□□ 0.72
SKA2-209ENST00000583976 DIXDC1Q155Q3 683 aa19.54■□□□□ 0.72
SKA2-209ENST00000583976 ATG9AQ7Z3C6 839 aa19.54■□□□□ 0.72
SKA2-209ENST00000583976 ZKSCAN4Q969J2 545 aaPredicted RBP19.54■□□□□ 0.72
SKA2-209ENST00000583976 EFCC1Q9HA90 598 aa19.54■□□□□ 0.72
SKA2-209ENST00000583976 TMOD2Q9NZR1 351 aa19.54■□□□□ 0.72
SKA2-209ENST00000583976 NOB1Q9ULX3 412 aaKnown RBP19.54■□□□□ 0.72
SKA2-209ENST00000583976 MAST3O60307 1309 aa19.53■□□□□ 0.72
SKA2-209ENST00000583976 DOCK2Q92608 1830 aa19.53■□□□□ 0.72
SKA2-209ENST00000583976 SLC5A1P13866 664 aa19.53■□□□□ 0.72
SKA2-209ENST00000583976 PRDX5P30044 214 aa19.52■□□□□ 0.72
SKA2-209ENST00000583976 GTF2A2P52657 109 aa19.52■□□□□ 0.72
SKA2-209ENST00000583976 DAGLAQ9Y4D2 1042 aa19.52■□□□□ 0.72
SKA2-209ENST00000583976 NFIAQ12857 509 aa19.51■□□□□ 0.71
SKA2-209ENST00000583976 MIGA2Q7L4E1 593 aa19.51■□□□□ 0.71
SKA2-209ENST00000583976 FAM83AQ86UY5 434 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms