RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 CCDC88AQ3V6T2 1871 aa11.29□□□□□ -0.6
UBBP4-201ENST00000583708 GOLIM4O00461 696 aa11.28□□□□□ -0.6
UBBP4-201ENST00000583708 MYO1BO43795 1136 aa11.28□□□□□ -0.6
UBBP4-201ENST00000583708 BAG3O95817 575 aa11.28□□□□□ -0.6
UBBP4-201ENST00000583708 PLCG2P16885 1265 aa11.28□□□□□ -0.6
UBBP4-201ENST00000583708 YY1P25490 414 aa11.28□□□□□ -0.6
UBBP4-201ENST00000583708 PPP4CP60510 307 aa11.28□□□□□ -0.6
UBBP4-201ENST00000583708 UBE3CQ15386 1083 aa11.28□□□□□ -0.6
UBBP4-201ENST00000583708 DLGAP5Q15398 846 aa11.28□□□□□ -0.6
UBBP4-201ENST00000583708 NOL10Q9BSC4 688 aaKnown RBP11.28□□□□□ -0.6
UBBP4-201ENST00000583708 MYOZ2Q9NPC6 264 aa11.28□□□□□ -0.6
UBBP4-201ENST00000583708 SNRKQ9NRH2 765 aa11.28□□□□□ -0.6
UBBP4-201ENST00000583708 RAI14Q9P0K7 980 aa11.28□□□□□ -0.6
UBBP4-201ENST00000583708 PGAP2Q9UHJ9 254 aa11.28□□□□□ -0.6
UBBP4-201ENST00000583708 RFX7Q2KHR2 1363 aa11.28□□□□□ -0.6
UBBP4-201ENST00000583708 EIF5BO60841 1220 aaKnown RBP11.27□□□□□ -0.61
UBBP4-201ENST00000583708 NPM3O75607 178 aaKnown RBP11.27□□□□□ -0.61
UBBP4-201ENST00000583708 PDE4AP27815 886 aa11.27□□□□□ -0.61
UBBP4-201ENST00000583708 EPHX2P34913 555 aa11.27□□□□□ -0.61
UBBP4-201ENST00000583708 NAA16Q6N069 864 aaPredicted RBP11.27□□□□□ -0.61
UBBP4-201ENST00000583708 KIAA0825Q8IV33 1275 aa11.27□□□□□ -0.61
UBBP4-201ENST00000583708 MICALL2Q8IY33 904 aa11.27□□□□□ -0.61
UBBP4-201ENST00000583708 OTUD7AQ8TE49 926 aaPredicted RBP11.27□□□□□ -0.61
UBBP4-201ENST00000583708 NSUN4Q96CB9 384 aaKnown RBP11.27□□□□□ -0.61
UBBP4-201ENST00000583708 ZBED3Q96IU2 234 aaPredicted RBP11.27□□□□□ -0.61
UBBP4-201ENST00000583708 DNAJC2Q99543 621 aaKnown RBP11.27□□□□□ -0.61
UBBP4-201ENST00000583708 TAF1DQ9H5J8 278 aaPredicted RBP11.27□□□□□ -0.61
UBBP4-201ENST00000583708 GPBP1L1Q9HC44 474 aaPredicted RBP11.27□□□□□ -0.61
UBBP4-201ENST00000583708 TAOK2Q9UL54 1235 aa11.27□□□□□ -0.61
UBBP4-201ENST00000583708 ZBTB12Q9Y330 459 aaPredicted RBP11.27□□□□□ -0.61
UBBP4-201ENST00000583708 PSME4Q14997 1843 aa11.27□□□□□ -0.61
UBBP4-201ENST00000583708 GAKO14976 1311 aa11.27□□□□□ -0.61
UBBP4-201ENST00000583708 PITPNM2Q9BZ72 1349 aa11.27□□□□□ -0.61
UBBP4-201ENST00000583708 WDR90Q96KV7 1748 aa11.26□□□□□ -0.61
UBBP4-201ENST00000583708 GPR75-ASB3A0A0A6YYF3 556 aa11.26□□□□□ -0.61
UBBP4-201ENST00000583708 SPDYE2BA6NHP3 402 aa11.26□□□□□ -0.61
UBBP4-201ENST00000583708 IDH1O75874 414 aaKnown RBP11.26□□□□□ -0.61
UBBP4-201ENST00000583708 SPDYE6P0CI01 402 aa11.26□□□□□ -0.61
UBBP4-201ENST00000583708 PRDX5P30044 214 aa11.26□□□□□ -0.61
UBBP4-201ENST00000583708 CRKP46108 304 aa11.26□□□□□ -0.61
UBBP4-201ENST00000583708 MECOMQ03112 1051 aa11.26□□□□□ -0.61
UBBP4-201ENST00000583708 BMP2KLQ5H9B9 411 aa11.26□□□□□ -0.61
UBBP4-201ENST00000583708 TTC22Q5TAA0 569 aa11.26□□□□□ -0.61
UBBP4-201ENST00000583708 SLC9C2Q5TAH2 1124 aa11.26□□□□□ -0.61
UBBP4-201ENST00000583708 PIH1D3Q9NQM4 214 aaKnown RBP11.26□□□□□ -0.61
UBBP4-201ENST00000583708 SCN4AP35499 1836 aa11.25□□□□□ -0.61
UBBP4-201ENST00000583708 SCN9AQ15858 1988 aa11.25□□□□□ -0.61
UBBP4-201ENST00000583708 POTECB2RU33 542 aa11.25□□□□□ -0.61
UBBP4-201ENST00000583708 RNF113AO15541 343 aaKnown RBP11.25□□□□□ -0.61
UBBP4-201ENST00000583708 ADD2P35612 726 aa11.25□□□□□ -0.61
UBBP4-201ENST00000583708 EPS15P42566 896 aa11.25□□□□□ -0.61
UBBP4-201ENST00000583708 MFAP1P55081 439 aaKnown RBP11.25□□□□□ -0.61
UBBP4-201ENST00000583708 TNFAIP1Q13829 316 aa11.25□□□□□ -0.61
UBBP4-201ENST00000583708 CFAP100Q494V2 611 aa11.25□□□□□ -0.61
UBBP4-201ENST00000583708 PI16Q6UXB8 463 aa11.25□□□□□ -0.61
UBBP4-201ENST00000583708 TBC1D9Q6ZT07 1266 aa11.25□□□□□ -0.61
UBBP4-201ENST00000583708 LDHDQ86WU2 507 aa11.25□□□□□ -0.61
UBBP4-201ENST00000583708 BCL11AQ9H165 835 aa11.25□□□□□ -0.61
UBBP4-201ENST00000583708 RRAGCQ9HB90 399 aa11.25□□□□□ -0.61
UBBP4-201ENST00000583708 TMOD2Q9NZR1 351 aa11.25□□□□□ -0.61
UBBP4-201ENST00000583708 TIAM2Q8IVF5 1701 aa11.25□□□□□ -0.61
UBBP4-201ENST00000583708 COL1A1P02452 1464 aaPredicted RBP11.25□□□□□ -0.61
UBBP4-201ENST00000583708 TRIM6-TRIM34B2RNG4 842 aa11.24□□□□□ -0.61
UBBP4-201ENST00000583708 WNT10BO00744 389 aa11.24□□□□□ -0.61
UBBP4-201ENST00000583708 PDE6AP16499 860 aa11.24□□□□□ -0.61
UBBP4-201ENST00000583708 CYP7A1P22680 504 aa11.24□□□□□ -0.61
UBBP4-201ENST00000583708 RBM5P52756 815 aaKnown RBP eCLIP11.24□□□□□ -0.61
UBBP4-201ENST00000583708 KIF4BQ2VIQ3 1234 aa11.24□□□□□ -0.61
UBBP4-201ENST00000583708 APOBEC3FQ8IUX4 373 aaKnown RBP11.24□□□□□ -0.61
UBBP4-201ENST00000583708 MXD3Q9BW11 206 aa11.24□□□□□ -0.61
UBBP4-201ENST00000583708 ANTXR1Q9H6X2 564 aa11.24□□□□□ -0.61
UBBP4-201ENST00000583708 HELLSQ9NRZ9 838 aa11.24□□□□□ -0.61
UBBP4-201ENST00000583708 PPP2R3BQ9Y5P8 575 aa11.24□□□□□ -0.61
UBBP4-201ENST00000583708 GTF3C3Q9Y5Q9 886 aa11.24□□□□□ -0.61
UBBP4-201ENST00000583708 AKAP11Q9UKA4 1901 aa11.24□□□□□ -0.61
UBBP4-201ENST00000583708 MROH7-TTC4A0A0A0MT08 1334 aa11.24□□□□□ -0.61
UBBP4-201ENST00000583708 F8W031 263 aaPredicted RBP11.23□□□□□ -0.61
UBBP4-201ENST00000583708 GNAT2P19087 354 aa11.23□□□□□ -0.61
UBBP4-201ENST00000583708 TNNI2P48788 182 aa11.23□□□□□ -0.61
UBBP4-201ENST00000583708 APOBEC3HQ6NTF7 200 aaKnown RBP11.23□□□□□ -0.61
UBBP4-201ENST00000583708 FAM83AQ86UY5 434 aa11.23□□□□□ -0.61
UBBP4-201ENST00000583708 MAGEB6Q8N7X4 407 aa11.23□□□□□ -0.61
UBBP4-201ENST00000583708 RUFY2Q8WXA3 655 aa11.23□□□□□ -0.61
UBBP4-201ENST00000583708 APPBP2Q92624 585 aa11.23□□□□□ -0.61
UBBP4-201ENST00000583708 DCPSQ96C86 337 aaKnown RBP11.23□□□□□ -0.61
UBBP4-201ENST00000583708 HOOK2Q96ED9 719 aa11.23□□□□□ -0.61
UBBP4-201ENST00000583708 FSD1Q9BTV5 496 aa11.23□□□□□ -0.61
UBBP4-201ENST00000583708 IDI2Q9BXS1 227 aa11.23□□□□□ -0.61
UBBP4-201ENST00000583708 JAG2Q9Y219 1238 aa11.23□□□□□ -0.61
UBBP4-201ENST00000583708 DAGLAQ9Y4D2 1042 aa11.23□□□□□ -0.61
UBBP4-201ENST00000583708 RPAP1Q9BWH6 1393 aaPredicted RBP11.23□□□□□ -0.61
UBBP4-201ENST00000583708 TCRBV5S4A2TA0A5A2 114 aa11.22□□□□□ -0.61
UBBP4-201ENST00000583708 ENTPD3O75355 529 aa11.22□□□□□ -0.61
UBBP4-201ENST00000583708 TOMM70O94826 608 aa11.22□□□□□ -0.61
UBBP4-201ENST00000583708 SDSP20132 328 aa11.22□□□□□ -0.61
UBBP4-201ENST00000583708 FSTL1Q12841 308 aa11.22□□□□□ -0.61
UBBP4-201ENST00000583708 GRIK5Q16478 980 aa11.22□□□□□ -0.61
UBBP4-201ENST00000583708 SPDYE2Q495Y8 402 aa11.22□□□□□ -0.61
UBBP4-201ENST00000583708 TBC1D10BQ4KMP7 808 aaPredicted RBP11.22□□□□□ -0.61
UBBP4-201ENST00000583708 ZMYM1Q5SVZ6 1142 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms