RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 BMP8BP34820 402 aa14.24□□□□□ -0.13
CASC3-208ENST00000583649 CHRNDQ07001 517 aa14.24□□□□□ -0.13
CASC3-208ENST00000583649 C17orf99Q6UX52 265 aa14.24□□□□□ -0.13
CASC3-208ENST00000583649 CNKSR2Q8WXI2 1034 aa14.24□□□□□ -0.13
CASC3-208ENST00000583649 TMOD2Q9NZR1 351 aa14.24□□□□□ -0.13
CASC3-208ENST00000583649 ECM29Q5VYK3 1845 aa14.24□□□□□ -0.13
CASC3-208ENST00000583649 ANKRD18BA2A2Z9 1011 aa14.23□□□□□ -0.13
CASC3-208ENST00000583649 TCP10L2B9ZVM9 353 aa14.23□□□□□ -0.13
CASC3-208ENST00000583649 SOX1O00570 391 aaPredicted RBP14.23□□□□□ -0.13
CASC3-208ENST00000583649 KLRK1P26718 216 aa14.23□□□□□ -0.13
CASC3-208ENST00000583649 PPIL2Q13356 520 aa14.23□□□□□ -0.13
CASC3-208ENST00000583649 DCAF15Q66K64 600 aa14.23□□□□□ -0.13
CASC3-208ENST00000583649 KSR2Q6VAB6 950 aa14.23□□□□□ -0.13
CASC3-208ENST00000583649 RUNDC1Q96C34 613 aa14.23□□□□□ -0.13
CASC3-208ENST00000583649 WRNIP1Q96S55 665 aa14.23□□□□□ -0.13
CASC3-208ENST00000583649 TTF2Q9UNY4 1162 aaKnown RBP14.23□□□□□ -0.13
CASC3-208ENST00000583649 ECM2O94769 699 aaPredicted RBP14.22□□□□□ -0.13
CASC3-208ENST00000583649 PPATQ06203 517 aa14.22□□□□□ -0.13
CASC3-208ENST00000583649 UBE3BQ7Z3V4 1068 aa14.22□□□□□ -0.13
CASC3-208ENST00000583649 NECAB2Q7Z6G3 386 aa14.22□□□□□ -0.13
CASC3-208ENST00000583649 ANKRD23Q86SG2 305 aa14.22□□□□□ -0.13
CASC3-208ENST00000583649 PARK7Q99497 189 aaKnown RBP14.22□□□□□ -0.13
CASC3-208ENST00000583649 MYH16Q9H6N6 1097 aa14.22□□□□□ -0.13
CASC3-208ENST00000583649 TDRD3Q9H7E2 651 aaKnown RBP14.22□□□□□ -0.13
CASC3-208ENST00000583649 CPA4Q9UI42 421 aa14.22□□□□□ -0.13
CASC3-208ENST00000583649 PCDHAC2Q9Y5I4 1007 aa14.22□□□□□ -0.13
CASC3-208ENST00000583649 IRF6O14896 467 aa14.21□□□□□ -0.13
CASC3-208ENST00000583649 WDR43Q15061 677 aaKnown RBP eCLIP14.21□□□□□ -0.13
CASC3-208ENST00000583649 MFSD14BQ5SR56 506 aa14.21□□□□□ -0.13
CASC3-208ENST00000583649 DZIP1LQ8IYY4 767 aaKnown RBP14.21□□□□□ -0.13
CASC3-208ENST00000583649 TEPSINQ96N21 525 aa14.21□□□□□ -0.13
CASC3-208ENST00000583649 STK31Q9BXU1 1019 aa14.21□□□□□ -0.13
CASC3-208ENST00000583649 TMEM39BQ9GZU3 492 aa14.21□□□□□ -0.13
CASC3-208ENST00000583649 MBIPQ9NS73 344 aa14.21□□□□□ -0.13
CASC3-208ENST00000583649 PI4KAP2A4QPH2 592 aa14.2□□□□□ -0.14
CASC3-208ENST00000583649 PDHXO00330 501 aa14.2□□□□□ -0.14
CASC3-208ENST00000583649 ELL2O00472 640 aaPredicted RBP14.2□□□□□ -0.14
CASC3-208ENST00000583649 GNAI1P63096 354 aa14.2□□□□□ -0.14
CASC3-208ENST00000583649 IFIT5Q13325 482 aaKnown RBP14.2□□□□□ -0.14
CASC3-208ENST00000583649 LRIT3Q3SXY7 679 aa14.2□□□□□ -0.14
CASC3-208ENST00000583649 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.2□□□□□ -0.14
CASC3-208ENST00000583649 PI4KAP1Q8N8J0 262 aa14.2□□□□□ -0.14
CASC3-208ENST00000583649 PLA2G12BQ9BX93 195 aa14.2□□□□□ -0.14
CASC3-208ENST00000583649 COL25A1Q9BXS0 654 aaPredicted RBP14.2□□□□□ -0.14
CASC3-208ENST00000583649 TRIM35Q9UPQ4 493 aa14.2□□□□□ -0.14
CASC3-208ENST00000583649 A0A0C4DFX4 3053 aa14.2□□□□□ -0.14
CASC3-208ENST00000583649 RANBP2P49792 3224 aaKnown RBP14.2□□□□□ -0.14
CASC3-208ENST00000583649 COL6A3P12111 3177 aa14.19□□□□□ -0.14
CASC3-208ENST00000583649 H7C1W4 665 aa14.19□□□□□ -0.14
CASC3-208ENST00000583649 ADCY3O60266 1144 aa14.19□□□□□ -0.14
CASC3-208ENST00000583649 PRKCZQ05513 592 aa14.19□□□□□ -0.14
CASC3-208ENST00000583649 TAF7LQ5H9L4 462 aa14.19□□□□□ -0.14
CASC3-208ENST00000583649 CCDC146Q8IYE0 955 aa14.19□□□□□ -0.14
CASC3-208ENST00000583649 PXYLP1Q8TE99 480 aa14.19□□□□□ -0.14
CASC3-208ENST00000583649 IFT57Q9NWB7 429 aa14.19□□□□□ -0.14
CASC3-208ENST00000583649 SNCAIPQ9Y6H5 919 aa14.19□□□□□ -0.14
CASC3-208ENST00000583649 FAM205AQ6ZU69 1335 aa14.18□□□□□ -0.14
CASC3-208ENST00000583649 NEURL1BA8MQ27 555 aa14.18□□□□□ -0.14
CASC3-208ENST00000583649 TAF5LO75529 589 aa14.18□□□□□ -0.14
CASC3-208ENST00000583649 IGKV5-2P06315 115 aa14.18□□□□□ -0.14
CASC3-208ENST00000583649 CRKP46108 304 aa14.18□□□□□ -0.14
CASC3-208ENST00000583649 RALBP1Q15311 655 aa14.18□□□□□ -0.14
CASC3-208ENST00000583649 TDHQ8IZJ6 230 aa14.18□□□□□ -0.14
CASC3-208ENST00000583649 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.18□□□□□ -0.14
CASC3-208ENST00000583649 ANKLE1Q8NAG6 615 aa14.18□□□□□ -0.14
CASC3-208ENST00000583649 DEFB118Q96PH6 123 aa14.18□□□□□ -0.14
CASC3-208ENST00000583649 GDF15Q99988 308 aa14.18□□□□□ -0.14
CASC3-208ENST00000583649 ZNF341Q9BYN7 854 aa14.18□□□□□ -0.14
CASC3-208ENST00000583649 UNC93B1Q9H1C4 597 aa14.18□□□□□ -0.14
CASC3-208ENST00000583649 MTMR10Q9NXD2 777 aa14.18□□□□□ -0.14
CASC3-208ENST00000583649 JAG2Q9Y219 1238 aa14.18□□□□□ -0.14
CASC3-208ENST00000583649 SPEF2Q9C093 1822 aa14.18□□□□□ -0.14
CASC3-208ENST00000583649 ADGRA2Q96PE1 1338 aa14.17□□□□□ -0.14
CASC3-208ENST00000583649 MYH3P11055 1940 aa14.17□□□□□ -0.14
CASC3-208ENST00000583649 CSF1RP07333 972 aa14.17□□□□□ -0.14
CASC3-208ENST00000583649 HDLBPQ00341 1268 aaKnown RBP14.17□□□□□ -0.14
CASC3-208ENST00000583649 CWF19L2Q2TBE0 894 aaKnown RBP14.17□□□□□ -0.14
CASC3-208ENST00000583649 FAM83AQ86UY5 434 aa14.17□□□□□ -0.14
CASC3-208ENST00000583649 VPS37DQ86XT2 251 aa14.17□□□□□ -0.14
CASC3-208ENST00000583649 ZKSCAN4Q969J2 545 aaPredicted RBP14.17□□□□□ -0.14
CASC3-208ENST00000583649 CHMP3Q9Y3E7 222 aa14.17□□□□□ -0.14
CASC3-208ENST00000583649 OTOFQ9HC10 1997 aa14.16□□□□□ -0.14
CASC3-208ENST00000583649 FRAT2O75474 233 aaPredicted RBP14.16□□□□□ -0.14
CASC3-208ENST00000583649 INHAP05111 366 aa14.16□□□□□ -0.14
CASC3-208ENST00000583649 HIBADHP31937 336 aaKnown RBP14.16□□□□□ -0.14
CASC3-208ENST00000583649 FKBP1CQ5VVH2 108 aa14.16□□□□□ -0.14
CASC3-208ENST00000583649 C7orf61Q8IZ16 206 aa14.16□□□□□ -0.14
CASC3-208ENST00000583649 TBC1D22AQ8WUA7 517 aa14.16□□□□□ -0.14
CASC3-208ENST00000583649 TEKT1Q969V4 418 aa14.16□□□□□ -0.14
CASC3-208ENST00000583649 PAWRQ96IZ0 340 aaKnown RBP14.16□□□□□ -0.14
CASC3-208ENST00000583649 UBE2OQ9C0C9 1292 aaKnown RBP14.16□□□□□ -0.14
CASC3-208ENST00000583649 CNNM1Q9NRU3 951 aa14.16□□□□□ -0.14
CASC3-208ENST00000583649 CUL9Q8IWT3 2517 aa14.15□□□□□ -0.14
CASC3-208ENST00000583649 TNPO2O14787 897 aaKnown RBP14.15□□□□□ -0.14
CASC3-208ENST00000583649 PLIN1O60240 522 aa14.15□□□□□ -0.14
CASC3-208ENST00000583649 IRF5Q13568 498 aa14.15□□□□□ -0.14
CASC3-208ENST00000583649 GCKRQ14397 625 aa14.15□□□□□ -0.14
CASC3-208ENST00000583649 CCDC57Q2TAC2 916 aa14.15□□□□□ -0.14
CASC3-208ENST00000583649 Q7L0L9 218 aa14.15□□□□□ -0.14
CASC3-208ENST00000583649 FASTKD5Q7L8L6 764 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms