RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 TRIM56Q9BRZ2 755 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-219ENST00000583294 SEMA6BQ9H3T3 888 aa9.16□□□□□ -0.94
SMARCE1-219ENST00000583294 F6X3S4 739 aa9.15□□□□□ -0.94
SMARCE1-219ENST00000583294 CELA3AP09093 270 aa9.15□□□□□ -0.94
SMARCE1-219ENST00000583294 FAM117BQ6P1L5 589 aa9.15□□□□□ -0.94
SMARCE1-219ENST00000583294 CARD10Q9BWT7 1032 aa9.15□□□□□ -0.94
SMARCE1-219ENST00000583294 CEP44Q9C0F1 390 aa9.15□□□□□ -0.94
SMARCE1-219ENST00000583294 METTL5Q9NRN9 209 aaKnown RBP9.15□□□□□ -0.94
SMARCE1-219ENST00000583294 GGT7Q9UJ14 662 aa9.15□□□□□ -0.94
SMARCE1-219ENST00000583294 SV2BQ7L1I2 683 aa9.14□□□□□ -0.95
SMARCE1-219ENST00000583294 NECAB3Q96P71 396 aaPredicted RBP9.14□□□□□ -0.95
SMARCE1-219ENST00000583294 TMEM39AQ9NV64 488 aa9.14□□□□□ -0.95
SMARCE1-219ENST00000583294 A0A0A0MRY4 1105 aa9.13□□□□□ -0.95
SMARCE1-219ENST00000583294 ENC1O14682 589 aa9.13□□□□□ -0.95
SMARCE1-219ENST00000583294 HS2ST1Q7LGA3 356 aa9.13□□□□□ -0.95
SMARCE1-219ENST00000583294 METTL16Q86W50 562 aaKnown RBP9.13□□□□□ -0.95
SMARCE1-219ENST00000583294 NT5DC4Q86YG4 428 aa9.13□□□□□ -0.95
SMARCE1-219ENST00000583294 TPSG1Q9NRR2 321 aa9.13□□□□□ -0.95
SMARCE1-219ENST00000583294 FSCN2O14926 492 aa9.12□□□□□ -0.95
SMARCE1-219ENST00000583294 PAGE1O75459 146 aa9.12□□□□□ -0.95
SMARCE1-219ENST00000583294 B3GALT4O96024 378 aa9.12□□□□□ -0.95
SMARCE1-219ENST00000583294 SELPP16109 830 aa9.12□□□□□ -0.95
SMARCE1-219ENST00000583294 ARL4DP49703 201 aa9.12□□□□□ -0.95
SMARCE1-219ENST00000583294 GSTM4Q03013 218 aa9.12□□□□□ -0.95
SMARCE1-219ENST00000583294 PPP2R3AQ06190 1150 aa9.12□□□□□ -0.95
SMARCE1-219ENST00000583294 XP32Q5T750 250 aa9.12□□□□□ -0.95
SMARCE1-219ENST00000583294 ANKRD24Q8TF21 1146 aa9.12□□□□□ -0.95
SMARCE1-219ENST00000583294 COPRSQ9NQ92 184 aa9.12□□□□□ -0.95
SMARCE1-219ENST00000583294 ERCC5P28715 1186 aaPredicted RBP9.11□□□□□ -0.95
SMARCE1-219ENST00000583294 PIP4K2BP78356 416 aa9.11□□□□□ -0.95
SMARCE1-219ENST00000583294 SETDB1Q15047 1291 aa9.11□□□□□ -0.95
SMARCE1-219ENST00000583294 RSPO4Q2I0M5 234 aaPredicted RBP9.11□□□□□ -0.95
SMARCE1-219ENST00000583294 KLHDC7BQ96G42 594 aa9.11□□□□□ -0.95
SMARCE1-219ENST00000583294 NACC1Q96RE7 527 aa9.11□□□□□ -0.95
SMARCE1-219ENST00000583294 NOC4LQ9BVI4 516 aaKnown RBP9.11□□□□□ -0.95
SMARCE1-219ENST00000583294 PCDHGB7Q9Y5F8 929 aa9.11□□□□□ -0.95
SMARCE1-219ENST00000583294 C19orf57Q0VDD7 668 aa9.1□□□□□ -0.95
SMARCE1-219ENST00000583294 ZNF394Q53GI3 561 aa9.1□□□□□ -0.95
SMARCE1-219ENST00000583294 SHISA2Q6UWI4 295 aa9.1□□□□□ -0.95
SMARCE1-219ENST00000583294 ILDR2Q71H61 639 aa9.1□□□□□ -0.95
SMARCE1-219ENST00000583294 GALNT11Q8NCW6 608 aa9.1□□□□□ -0.95
SMARCE1-219ENST00000583294 KBTBD4Q9NVX7 518 aa9.1□□□□□ -0.95
SMARCE1-219ENST00000583294 MINDY4BA8MYZ0 360 aa9.09□□□□□ -0.95
SMARCE1-219ENST00000583294 ELNP15502 786 aa9.09□□□□□ -0.95
SMARCE1-219ENST00000583294 RAC1P63000 192 aa9.09□□□□□ -0.95
SMARCE1-219ENST00000583294 NKAPLQ5M9Q1 402 aa9.09□□□□□ -0.95
SMARCE1-219ENST00000583294 PCNX4Q63HM2 1172 aa9.09□□□□□ -0.95
SMARCE1-219ENST00000583294 USP48Q86UV5 1035 aa9.09□□□□□ -0.95
SMARCE1-219ENST00000583294 RELL1Q8IUW5 271 aa9.09□□□□□ -0.95
SMARCE1-219ENST00000583294 DDX54Q8TDD1 881 aaKnown RBP9.09□□□□□ -0.95
SMARCE1-219ENST00000583294 STK35Q8TDR2 534 aa9.09□□□□□ -0.95
SMARCE1-219ENST00000583294 C9orf172C9J069 976 aa9.08□□□□□ -0.96
SMARCE1-219ENST00000583294 DDX3YO15523 660 aaKnown RBP9.08□□□□□ -0.96
SMARCE1-219ENST00000583294 DEAF1O75398 565 aaPredicted RBP9.08□□□□□ -0.96
SMARCE1-219ENST00000583294 GBP2P32456 591 aaPredicted RBP9.08□□□□□ -0.96
SMARCE1-219ENST00000583294 LIG3P49916 1009 aa9.08□□□□□ -0.96
SMARCE1-219ENST00000583294 NLRP12P59046 1061 aa9.08□□□□□ -0.96
SMARCE1-219ENST00000583294 TTBK2Q6IQ55 1244 aa9.08□□□□□ -0.96
SMARCE1-219ENST00000583294 ERMP1Q7Z2K6 904 aa9.08□□□□□ -0.96
SMARCE1-219ENST00000583294 SULF2Q8IWU5 870 aa9.08□□□□□ -0.96
SMARCE1-219ENST00000583294 RSRP1Q9BUV0 290 aa9.08□□□□□ -0.96
SMARCE1-219ENST00000583294 CBX8Q9HC52 389 aa9.08□□□□□ -0.96
SMARCE1-219ENST00000583294 OSGEPQ9NPF4 335 aa9.08□□□□□ -0.96
SMARCE1-219ENST00000583294 TLR6Q9Y2C9 796 aa9.08□□□□□ -0.96
SMARCE1-219ENST00000583294 NME2P22392 152 aa9.07□□□□□ -0.96
SMARCE1-219ENST00000583294 RAD51AP2Q09MP3 1159 aa9.07□□□□□ -0.96
SMARCE1-219ENST00000583294 ADGRE1Q14246 886 aa9.07□□□□□ -0.96
SMARCE1-219ENST00000583294 FMR1NBQ8N0W7 255 aaPredicted RBP9.07□□□□□ -0.96
SMARCE1-219ENST00000583294 Q8N3U1 123 aa9.07□□□□□ -0.96
SMARCE1-219ENST00000583294 WNT8BQ93098 351 aa9.07□□□□□ -0.96
SMARCE1-219ENST00000583294 ZC3H12CQ9C0D7 883 aaKnown RBP9.07□□□□□ -0.96
SMARCE1-219ENST00000583294 SOX17Q9H6I2 414 aaPredicted RBP9.07□□□□□ -0.96
SMARCE1-219ENST00000583294 SAMM50Q9Y512 469 aa9.07□□□□□ -0.96
SMARCE1-219ENST00000583294 BMP6P22004 513 aa9.06□□□□□ -0.96
SMARCE1-219ENST00000583294 ARNTP27540 789 aa9.06□□□□□ -0.96
SMARCE1-219ENST00000583294 RACK1P63244 317 aaKnown RBP9.06□□□□□ -0.96
SMARCE1-219ENST00000583294 MBTPS1Q14703 1052 aa9.06□□□□□ -0.96
SMARCE1-219ENST00000583294 RASIP1Q5U651 963 aa9.06□□□□□ -0.96
SMARCE1-219ENST00000583294 KLHL23Q8NBE8 558 aa9.06□□□□□ -0.96
SMARCE1-219ENST00000583294 GRIN3AQ8TCU5 1115 aa9.06□□□□□ -0.96
SMARCE1-219ENST00000583294 LENG1Q96BZ8 264 aaPredicted RBP9.06□□□□□ -0.96
SMARCE1-219ENST00000583294 TMEM74Q96NL1 305 aa9.06□□□□□ -0.96
SMARCE1-219ENST00000583294 USP26Q9BXU7 913 aa9.06□□□□□ -0.96
SMARCE1-219ENST00000583294 KCNK4Q9NYG8 393 aa9.06□□□□□ -0.96
SMARCE1-219ENST00000583294 DDX41Q9UJV9 622 aaKnown RBP9.06□□□□□ -0.96
SMARCE1-219ENST00000583294 ECEL1O95672 775 aa9.05□□□□□ -0.96
SMARCE1-219ENST00000583294 RLBP1P12271 317 aa9.05□□□□□ -0.96
SMARCE1-219ENST00000583294 CD68P34810 354 aaPredicted RBP9.05□□□□□ -0.96
SMARCE1-219ENST00000583294 MAP4K3Q8IVH8 894 aa9.05□□□□□ -0.96
SMARCE1-219ENST00000583294 PHC3Q8NDX5 983 aa9.05□□□□□ -0.96
SMARCE1-219ENST00000583294 SRA1Q9HD15 236 aaKnown RBP9.05□□□□□ -0.96
SMARCE1-219ENST00000583294 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.05□□□□□ -0.96
SMARCE1-219ENST00000583294 TM4SF5O14894 197 aa9.04□□□□□ -0.96
SMARCE1-219ENST00000583294 MAOBP27338 520 aa9.04□□□□□ -0.96
SMARCE1-219ENST00000583294 FAM160A1Q05DH4 1040 aa9.04□□□□□ -0.96
SMARCE1-219ENST00000583294 AP3B2Q13367 1082 aa9.04□□□□□ -0.96
SMARCE1-219ENST00000583294 PWP1Q13610 501 aa9.04□□□□□ -0.96
SMARCE1-219ENST00000583294 POU4F3Q15319 338 aa9.04□□□□□ -0.96
SMARCE1-219ENST00000583294 FOXD4L6Q3SYB3 417 aaPredicted RBP9.04□□□□□ -0.96
SMARCE1-219ENST00000583294 FOXD4L3Q6VB84 417 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms