RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 PTH1RQ03431 593 aa17.55■□□□□ 0.4
SENP3-208ENST00000583277 AOC3Q16853 763 aa17.55■□□□□ 0.4
SENP3-208ENST00000583277 DOK7Q18PE1 504 aa17.55■□□□□ 0.4
SENP3-208ENST00000583277 MFSD14BQ5SR56 506 aa17.55■□□□□ 0.4
SENP3-208ENST00000583277 NSUN4Q96CB9 384 aaKnown RBP17.55■□□□□ 0.4
SENP3-208ENST00000583277 JAG2Q9Y219 1238 aa17.55■□□□□ 0.4
SENP3-208ENST00000583277 BCS1LQ9Y276 419 aa17.55■□□□□ 0.4
SENP3-208ENST00000583277 ZNF646O15015 1829 aaPredicted RBP17.55■□□□□ 0.4
SENP3-208ENST00000583277 SCN9AQ15858 1988 aa17.55■□□□□ 0.4
SENP3-208ENST00000583277 MYH2Q9UKX2 1941 aa17.54■□□□□ 0.4
SENP3-208ENST00000583277 ECE2O60344 883 aa17.54■□□□□ 0.4
SENP3-208ENST00000583277 MECOMQ03112 1051 aa17.54■□□□□ 0.4
SENP3-208ENST00000583277 NLGN2Q8NFZ4 835 aa17.54■□□□□ 0.4
SENP3-208ENST00000583277 TAOK3Q9H2K8 898 aa17.54■□□□□ 0.4
SENP3-208ENST00000583277 DBNDD1Q9H9R9 158 aa17.54■□□□□ 0.4
SENP3-208ENST00000583277 U3KPZ7 1027 aaPredicted RBP17.54■□□□□ 0.4
SENP3-208ENST00000583277 LTBP3Q9NS15 1303 aa17.53■□□□□ 0.4
SENP3-208ENST00000583277 GTF2IP78347 998 aa17.53■□□□□ 0.4
SENP3-208ENST00000583277 RNF20Q5VTR2 975 aa17.53■□□□□ 0.4
SENP3-208ENST00000583277 TTLL5Q6EMB2 1281 aa17.53■□□□□ 0.4
SENP3-208ENST00000583277 FHDC1Q9C0D6 1143 aaPredicted RBP17.53■□□□□ 0.4
SENP3-208ENST00000583277 RBM8AQ9Y5S9 174 aaKnown RBP17.53■□□□□ 0.4
SENP3-208ENST00000583277 HSPD1P10809 573 aaKnown RBP17.53■□□□□ 0.4
SENP3-208ENST00000583277 GNAT2P19087 354 aa17.53■□□□□ 0.4
SENP3-208ENST00000583277 FKBP1AP62942 108 aaKnown RBP17.53■□□□□ 0.4
SENP3-208ENST00000583277 STRIP1Q5VSL9 837 aa17.53■□□□□ 0.4
SENP3-208ENST00000583277 SLF2Q8IX21 1173 aa17.53■□□□□ 0.4
SENP3-208ENST00000583277 IL17RAQ96F46 866 aa17.53■□□□□ 0.4
SENP3-208ENST00000583277 DDRGK1Q96HY6 314 aa17.53■□□□□ 0.4
SENP3-208ENST00000583277 MBD4O95243 580 aa17.52■□□□□ 0.39
SENP3-208ENST00000583277 CERS3Q8IU89 383 aa17.52■□□□□ 0.39
SENP3-208ENST00000583277 LARGE2Q8N3Y3 721 aa17.52■□□□□ 0.39
SENP3-208ENST00000583277 FBXW7Q969H0 707 aa17.52■□□□□ 0.39
SENP3-208ENST00000583277 LAMA4Q16363 1823 aa17.52■□□□□ 0.39
SENP3-208ENST00000583277 RPAP1Q9BWH6 1393 aaPredicted RBP17.51■□□□□ 0.39
SENP3-208ENST00000583277 MAGEB6P1A0A0J9YX57 407 aa17.51■□□□□ 0.39
SENP3-208ENST00000583277 LDHCP07864 332 aa17.51■□□□□ 0.39
SENP3-208ENST00000583277 ZKSCAN1P17029 563 aaPredicted RBP17.51■□□□□ 0.39
SENP3-208ENST00000583277 IARSP41252 1262 aaKnown RBP17.51■□□□□ 0.39
SENP3-208ENST00000583277 NECTIN1Q15223 517 aa17.51■□□□□ 0.39
SENP3-208ENST00000583277 RABEP1Q15276 862 aa17.51■□□□□ 0.39
SENP3-208ENST00000583277 ZNF384Q8TF68 577 aa17.51■□□□□ 0.39
SENP3-208ENST00000583277 STRBPQ96SI9 672 aaKnown RBP17.51■□□□□ 0.39
SENP3-208ENST00000583277 KIF2CQ99661 725 aa17.51■□□□□ 0.39
SENP3-208ENST00000583277 ZNF277Q9NRM2 450 aaPredicted RBP17.51■□□□□ 0.39
SENP3-208ENST00000583277 CTNNA3Q9UI47 895 aa17.51■□□□□ 0.39
SENP3-208ENST00000583277 ZMYM6O95789 1325 aa17.5■□□□□ 0.39
SENP3-208ENST00000583277 USP17L3A6NCW0 530 aa17.5■□□□□ 0.39
SENP3-208ENST00000583277 USP17L4A6NCW7 530 aa17.5■□□□□ 0.39
SENP3-208ENST00000583277 VPS53Q5VIR6 699 aa17.5■□□□□ 0.39
SENP3-208ENST00000583277 USP17L1Q7RTZ2 530 aa17.5■□□□□ 0.39
SENP3-208ENST00000583277 ADGRA1Q86SQ6 560 aa17.5■□□□□ 0.39
SENP3-208ENST00000583277 IL27Q8NEV9 243 aa17.5■□□□□ 0.39
SENP3-208ENST00000583277 KCNB2Q92953 911 aa17.5■□□□□ 0.39
SENP3-208ENST00000583277 CREB3L3Q68CJ9 461 aa17.49■□□□□ 0.39
SENP3-208ENST00000583277 NIM1KQ8IY84 436 aa17.49■□□□□ 0.39
SENP3-208ENST00000583277 MIGA1Q8NAN2 632 aa17.49■□□□□ 0.39
SENP3-208ENST00000583277 NOL10Q9BSC4 688 aaKnown RBP17.49■□□□□ 0.39
SENP3-208ENST00000583277 PALD1Q9ULE6 856 aa17.49■□□□□ 0.39
SENP3-208ENST00000583277 MROH7-TTC4A0A0A0MT08 1334 aa17.49■□□□□ 0.39
SENP3-208ENST00000583277 NFKBIEO00221 500 aa17.49■□□□□ 0.39
SENP3-208ENST00000583277 LCORLQ8N3X6 602 aa17.49■□□□□ 0.39
SENP3-208ENST00000583277 RIOK1Q9BRS2 568 aaKnown RBP17.49■□□□□ 0.39
SENP3-208ENST00000583277 ARMT1Q9H993 441 aa17.49■□□□□ 0.39
SENP3-208ENST00000583277 SLC27A2O14975 620 aa17.48■□□□□ 0.39
SENP3-208ENST00000583277 BAG3O95817 575 aa17.48■□□□□ 0.39
SENP3-208ENST00000583277 DACT2Q5SW24 774 aa17.48■□□□□ 0.39
SENP3-208ENST00000583277 NACAP1Q9BZK3 213 aa17.48■□□□□ 0.39
SENP3-208ENST00000583277 SNX14Q9Y5W7 946 aa17.48■□□□□ 0.39
SENP3-208ENST00000583277 COL4A5P29400 1685 aa17.48■□□□□ 0.39
SENP3-208ENST00000583277 MYO3BQ8WXR4 1341 aa17.47■□□□□ 0.39
SENP3-208ENST00000583277 PATL2C9JE40 543 aaKnown RBP17.47■□□□□ 0.39
SENP3-208ENST00000583277 FOXP2O15409 715 aa17.47■□□□□ 0.39
SENP3-208ENST00000583277 KRT32Q14532 448 aa17.47■□□□□ 0.39
SENP3-208ENST00000583277 ALX1Q15699 326 aa17.47■□□□□ 0.39
SENP3-208ENST00000583277 GRIK5Q16478 980 aa17.47■□□□□ 0.39
SENP3-208ENST00000583277 CERS5Q8N5B7 392 aa17.47■□□□□ 0.39
SENP3-208ENST00000583277 FAM163AQ96GL9 167 aaPredicted RBP17.47■□□□□ 0.39
SENP3-208ENST00000583277 SYT17Q9BSW7 474 aa17.47■□□□□ 0.39
SENP3-208ENST00000583277 ZNRF3Q9ULT6 936 aa17.47■□□□□ 0.39
SENP3-208ENST00000583277 SLC4A4Q9Y6R1 1079 aa17.47■□□□□ 0.39
SENP3-208ENST00000583277 GAKO14976 1311 aa17.46■□□□□ 0.39
SENP3-208ENST00000583277 YDJCA8MPS7 323 aa17.46■□□□□ 0.39
SENP3-208ENST00000583277 APPP05067 770 aa17.46■□□□□ 0.39
SENP3-208ENST00000583277 PLCG2P16885 1265 aa17.46■□□□□ 0.39
SENP3-208ENST00000583277 BECN1Q14457 450 aa17.46■□□□□ 0.39
SENP3-208ENST00000583277 DIXDC1Q155Q3 683 aa17.46■□□□□ 0.39
SENP3-208ENST00000583277 IMMTQ16891 758 aaKnown RBP17.46■□□□□ 0.39
SENP3-208ENST00000583277 TSGA10IPQ3SY00 556 aa17.46■□□□□ 0.39
SENP3-208ENST00000583277 JDP2Q8WYK2 163 aa17.46■□□□□ 0.39
SENP3-208ENST00000583277 CRNKL1Q9BZJ0 848 aaKnown RBP17.46■□□□□ 0.39
SENP3-208ENST00000583277 AATFQ9NY61 560 aaKnown RBP eCLIP17.46■□□□□ 0.39
SENP3-208ENST00000583277 TTF2Q9UNY4 1162 aaKnown RBP17.46■□□□□ 0.39
SENP3-208ENST00000583277 FGAP02671 866 aa17.45■□□□□ 0.38
SENP3-208ENST00000583277 PPP4CP60510 307 aa17.45■□□□□ 0.38
SENP3-208ENST00000583277 RASEFQ8IZ41 740 aa17.45■□□□□ 0.38
SENP3-208ENST00000583277 DICER1Q9UPY3 1922 aaKnown RBP17.45■□□□□ 0.38
SENP3-208ENST00000583277 CDK5RAP2Q96SN8 1893 aa17.45■□□□□ 0.38
SENP3-208ENST00000583277 GSG1L2A8MUP6 293 aa17.45■□□□□ 0.38
SENP3-208ENST00000583277 PSMA5P28066 241 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms