RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 PDE8BO95263 885 aa18.16■□□□□ 0.5
ITGB4-208ENST00000582629 R3HDMLQ9H3Y0 253 aa18.16■□□□□ 0.5
ITGB4-208ENST00000582629 FRAT2O75474 233 aaPredicted RBP18.15■□□□□ 0.5
ITGB4-208ENST00000582629 TNNI2P48788 182 aa18.15■□□□□ 0.5
ITGB4-208ENST00000582629 HDLBPQ00341 1268 aaKnown RBP18.15■□□□□ 0.5
ITGB4-208ENST00000582629 SLFN5Q08AF3 891 aa18.15■□□□□ 0.5
ITGB4-208ENST00000582629 CHAF1AQ13111 956 aaPredicted RBP18.15■□□□□ 0.5
ITGB4-208ENST00000582629 FBXO46Q6PJ61 603 aaPredicted RBP18.15■□□□□ 0.5
ITGB4-208ENST00000582629 USP44Q9H0E7 712 aa18.15■□□□□ 0.5
ITGB4-208ENST00000582629 IQSEC3Q9UPP2 1182 aaPredicted RBP18.15■□□□□ 0.5
ITGB4-208ENST00000582629 MYH13Q9UKX3 1938 aa18.14■□□□□ 0.49
ITGB4-208ENST00000582629 IGF2BP3O00425 579 aaKnown RBP eCLIP18.14■□□□□ 0.49
ITGB4-208ENST00000582629 ALDH1L2Q3SY69 923 aa18.14■□□□□ 0.49
ITGB4-208ENST00000582629 TEPSINQ96N21 525 aa18.14■□□□□ 0.49
ITGB4-208ENST00000582629 KIF16BQ96L93 1317 aa18.14■□□□□ 0.49
ITGB4-208ENST00000582629 TCP10L2B9ZVM9 353 aa18.13■□□□□ 0.49
ITGB4-208ENST00000582629 GJA5P36382 358 aa18.13■□□□□ 0.49
ITGB4-208ENST00000582629 PUM3Q15397 648 aaKnown RBP18.13■□□□□ 0.49
ITGB4-208ENST00000582629 GRIK5Q16478 980 aa18.13■□□□□ 0.49
ITGB4-208ENST00000582629 OTUD7BQ6GQQ9 843 aa18.13■□□□□ 0.49
ITGB4-208ENST00000582629 KLHDC4Q8TBB5 520 aa18.13■□□□□ 0.49
ITGB4-208ENST00000582629 IFIT1P09914 478 aaKnown RBP18.12■□□□□ 0.49
ITGB4-208ENST00000582629 FGFR2P21802 821 aa18.12■□□□□ 0.49
ITGB4-208ENST00000582629 BCAMP50895 628 aa18.12■□□□□ 0.49
ITGB4-208ENST00000582629 TEKT1Q969V4 418 aa18.12■□□□□ 0.49
ITGB4-208ENST00000582629 TMEM39BQ9GZU3 492 aa18.12■□□□□ 0.49
ITGB4-208ENST00000582629 ELP3Q9H9T3 547 aa18.12■□□□□ 0.49
ITGB4-208ENST00000582629 SUGT1Q9Y2Z0 365 aa18.12■□□□□ 0.49
ITGB4-208ENST00000582629 MAST3O60307 1309 aa18.12■□□□□ 0.49
ITGB4-208ENST00000582629 TESPA1A2RU30 521 aaPredicted RBP18.11■□□□□ 0.49
ITGB4-208ENST00000582629 EYA2O00167 538 aa18.11■□□□□ 0.49
ITGB4-208ENST00000582629 CDAN1Q8IWY9 1227 aa18.11■□□□□ 0.49
ITGB4-208ENST00000582629 OPTNQ96CV9 577 aa18.11■□□□□ 0.49
ITGB4-208ENST00000582629 MRIQ9BWK5 157 aa18.11■□□□□ 0.49
ITGB4-208ENST00000582629 SMC4Q9NTJ3 1288 aa18.11■□□□□ 0.49
ITGB4-208ENST00000582629 RFX5P48382 616 aaPredicted RBP18.1■□□□□ 0.49
ITGB4-208ENST00000582629 MAP3K9P80192 1104 aa18.1■□□□□ 0.49
ITGB4-208ENST00000582629 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.1■□□□□ 0.49
ITGB4-208ENST00000582629 LPIN2Q92539 896 aa18.1■□□□□ 0.49
ITGB4-208ENST00000582629 ZDHHC15Q96MV8 337 aa18.1■□□□□ 0.49
ITGB4-208ENST00000582629 TMOD2Q9NZR1 351 aa18.1■□□□□ 0.49
ITGB4-208ENST00000582629 TRIM17Q9Y577 477 aa18.1■□□□□ 0.49
ITGB4-208ENST00000582629 SLC34A2O95436 690 aa18.09■□□□□ 0.49
ITGB4-208ENST00000582629 SLC5A1P13866 664 aa18.09■□□□□ 0.49
ITGB4-208ENST00000582629 CRHR2Q13324 411 aa18.09■□□□□ 0.49
ITGB4-208ENST00000582629 VGLL4Q14135 290 aa18.09■□□□□ 0.49
ITGB4-208ENST00000582629 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.09■□□□□ 0.49
ITGB4-208ENST00000582629 CDCA7LQ96GN5 454 aa18.09■□□□□ 0.49
ITGB4-208ENST00000582629 ERO1AQ96HE7 468 aa18.09■□□□□ 0.49
ITGB4-208ENST00000582629 CSADQ9Y600 493 aa18.09■□□□□ 0.49
ITGB4-208ENST00000582629 TNRC18O15417 2968 aaPredicted RBP18.08■□□□□ 0.49
ITGB4-208ENST00000582629 CT47B1P0C2W7 299 aaPredicted RBP18.08■□□□□ 0.48
ITGB4-208ENST00000582629 HHIPL2Q6UWX4 724 aa18.08■□□□□ 0.48
ITGB4-208ENST00000582629 OTOP1Q7RTM1 612 aa18.08■□□□□ 0.48
ITGB4-208ENST00000582629 PTPN18Q99952 460 aa18.08■□□□□ 0.48
ITGB4-208ENST00000582629 UBTFL1P0CB47 393 aaPredicted RBP18.07■□□□□ 0.48
ITGB4-208ENST00000582629 GTF2A2P52657 109 aa18.07■□□□□ 0.48
ITGB4-208ENST00000582629 CACNB3P54284 484 aa18.07■□□□□ 0.48
ITGB4-208ENST00000582629 FKBP1CQ5VVH2 108 aa18.07■□□□□ 0.48
ITGB4-208ENST00000582629 APOBEC3HQ6NTF7 200 aaKnown RBP18.07■□□□□ 0.48
ITGB4-208ENST00000582629 FAM83AQ86UY5 434 aa18.07■□□□□ 0.48
ITGB4-208ENST00000582629 TRMT2AQ8IZ69 625 aaKnown RBP18.07■□□□□ 0.48
ITGB4-208ENST00000582629 WDR66Q8TBY9 1149 aa18.07■□□□□ 0.48
ITGB4-208ENST00000582629 HOOK2Q96ED9 719 aa18.07■□□□□ 0.48
ITGB4-208ENST00000582629 MS4A4AQ96JQ5 239 aa18.07■□□□□ 0.48
ITGB4-208ENST00000582629 FBXO3Q9UK99 471 aa18.07■□□□□ 0.48
ITGB4-208ENST00000582629 RPAP1Q9BWH6 1393 aaPredicted RBP18.06■□□□□ 0.48
ITGB4-208ENST00000582629 ATG9AQ7Z3C6 839 aa18.06■□□□□ 0.48
ITGB4-208ENST00000582629 CNKSR2Q8WXI2 1034 aa18.06■□□□□ 0.48
ITGB4-208ENST00000582629 CCL15-CCL14A0A0B4J2E2 113 aa18.05■□□□□ 0.48
ITGB4-208ENST00000582629 CIAO1O76071 339 aa18.05■□□□□ 0.48
ITGB4-208ENST00000582629 SP3Q02447 781 aa18.05■□□□□ 0.48
ITGB4-208ENST00000582629 CCL15Q16663 113 aa18.05■□□□□ 0.48
ITGB4-208ENST00000582629 CD99L2Q8TCZ2 262 aa18.05■□□□□ 0.48
ITGB4-208ENST00000582629 BRI3BPQ8WY22 251 aa18.05■□□□□ 0.48
ITGB4-208ENST00000582629 OTUD5Q96G74 571 aa18.05■□□□□ 0.48
ITGB4-208ENST00000582629 API5Q9BZZ5 524 aaKnown RBP18.05■□□□□ 0.48
ITGB4-208ENST00000582629 HDAC5Q9UQL6 1122 aa18.05■□□□□ 0.48
ITGB4-208ENST00000582629 SPDYE5A6NIY4 337 aa18.04■□□□□ 0.48
ITGB4-208ENST00000582629 INTS3Q68E01 1043 aaKnown RBP18.04■□□□□ 0.48
ITGB4-208ENST00000582629 WRNIP1Q96S55 665 aa18.04■□□□□ 0.48
ITGB4-208ENST00000582629 SIL1Q9H173 461 aa18.04■□□□□ 0.48
ITGB4-208ENST00000582629 EFCC1Q9HA90 598 aa18.04■□□□□ 0.48
ITGB4-208ENST00000582629 ZFYVE28Q9HCC9 887 aa18.04■□□□□ 0.48
ITGB4-208ENST00000582629 GNL3LQ9NVN8 582 aaKnown RBP18.04■□□□□ 0.48
ITGB4-208ENST00000582629 NOB1Q9ULX3 412 aaKnown RBP18.04■□□□□ 0.48
ITGB4-208ENST00000582629 PTPN22Q9Y2R2 807 aa18.04■□□□□ 0.48
ITGB4-208ENST00000582629 TAF1CQ15572 869 aaPredicted RBP18.03■□□□□ 0.48
ITGB4-208ENST00000582629 ATP2B3Q16720 1220 aa18.03■□□□□ 0.48
ITGB4-208ENST00000582629 DCAF15Q66K64 600 aa18.03■□□□□ 0.48
ITGB4-208ENST00000582629 ERO1BQ86YB8 467 aa18.03■□□□□ 0.48
ITGB4-208ENST00000582629 CEP126Q9P2H0 1117 aa18.03■□□□□ 0.48
ITGB4-208ENST00000582629 SNCAIPQ9Y6H5 919 aa18.03■□□□□ 0.48
ITGB4-208ENST00000582629 RBBP6Q7Z6E9 1792 aaKnown RBP18.02■□□□□ 0.48
ITGB4-208ENST00000582629 AK9Q5TCS8 1911 aa18.02■□□□□ 0.48
ITGB4-208ENST00000582629 IL15P40933 162 aaPredicted RBP18.02■□□□□ 0.48
ITGB4-208ENST00000582629 PRPF38BQ5VTL8 546 aaKnown RBP18.02■□□□□ 0.48
ITGB4-208ENST00000582629 LRRFIP2Q9Y608 721 aaKnown RBP18.02■□□□□ 0.48
ITGB4-208ENST00000582629 SEMA3EO15041 775 aa18.01■□□□□ 0.47
ITGB4-208ENST00000582629 WDHD1O75717 1129 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms