RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 MBD4O95243 580 aa12.56□□□□□ -0.4
CDK5RAP3-225ENST00000582482 KLRK1P26718 216 aa12.56□□□□□ -0.4
CDK5RAP3-225ENST00000582482 CDC27P30260 824 aa12.56□□□□□ -0.4
CDK5RAP3-225ENST00000582482 SIK1P57059 783 aa12.56□□□□□ -0.4
CDK5RAP3-225ENST00000582482 FAM98CQ17RN3 349 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP3-225ENST00000582482 CCAR1Q8IX12 1150 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP3-225ENST00000582482 ZNF34Q8IZ26 560 aa12.56□□□□□ -0.4
CDK5RAP3-225ENST00000582482 PLA2G12BQ9BX93 195 aa12.56□□□□□ -0.4
CDK5RAP3-225ENST00000582482 UTRNP46939 3433 aa12.56□□□□□ -0.4
CDK5RAP3-225ENST00000582482 RFX7Q2KHR2 1363 aa12.56□□□□□ -0.4
CDK5RAP3-225ENST00000582482 SALL1Q9NSC2 1324 aa12.56□□□□□ -0.4
CDK5RAP3-225ENST00000582482 LRMPQ12912 555 aa12.55□□□□□ -0.4
CDK5RAP3-225ENST00000582482 CCDC39Q9UFE4 941 aa12.55□□□□□ -0.4
CDK5RAP3-225ENST00000582482 CYP2D7A0A087X1C5 515 aa12.55□□□□□ -0.4
CDK5RAP3-225ENST00000582482 GYG1P46976 350 aa12.55□□□□□ -0.4
CDK5RAP3-225ENST00000582482 EIF5P55010 431 aaKnown RBP12.55□□□□□ -0.4
CDK5RAP3-225ENST00000582482 LCORLQ8N3X6 602 aa12.55□□□□□ -0.4
CDK5RAP3-225ENST00000582482 TOMM22Q9NS69 142 aa12.55□□□□□ -0.4
CDK5RAP3-225ENST00000582482 MYH3P11055 1940 aa12.55□□□□□ -0.4
CDK5RAP3-225ENST00000582482 TCRBV5S4A2TA0A5A2 114 aa12.54□□□□□ -0.4
CDK5RAP3-225ENST00000582482 CAMTA2O94983 1202 aa12.54□□□□□ -0.4
CDK5RAP3-225ENST00000582482 ME1P48163 572 aa12.54□□□□□ -0.4
CDK5RAP3-225ENST00000582482 ARID5BQ14865 1188 aa12.54□□□□□ -0.4
CDK5RAP3-225ENST00000582482 TEX13AQ9BXU3 409 aaPredicted RBP12.54□□□□□ -0.4
CDK5RAP3-225ENST00000582482 AGXT2Q9BYV1 514 aa12.54□□□□□ -0.4
CDK5RAP3-225ENST00000582482 CCDC87Q9NVE4 849 aa12.54□□□□□ -0.4
CDK5RAP3-225ENST00000582482 ORC3Q9UBD5 711 aaPredicted RBP12.54□□□□□ -0.4
CDK5RAP3-225ENST00000582482 MYH7P12883 1935 aa12.54□□□□□ -0.4
CDK5RAP3-225ENST00000582482 hCG_1642624A0A1W2PR95 340 aa12.54□□□□□ -0.4
CDK5RAP3-225ENST00000582482 PTGS1P23219 599 aa12.54□□□□□ -0.4
CDK5RAP3-225ENST00000582482 MARCKSP29966 332 aaPredicted RBP12.54□□□□□ -0.4
CDK5RAP3-225ENST00000582482 PTPN21Q16825 1174 aa12.54□□□□□ -0.4
CDK5RAP3-225ENST00000582482 RALYLQ86SE5 291 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP3-225ENST00000582482 SPATA5Q8NB90 893 aa12.54□□□□□ -0.4
CDK5RAP3-225ENST00000582482 SDR42E1Q8WUS8 393 aa12.54□□□□□ -0.4
CDK5RAP3-225ENST00000582482 MPHOSPH8Q99549 860 aa12.54□□□□□ -0.4
CDK5RAP3-225ENST00000582482 SCAND2PQ9GZW5 306 aaPredicted RBP12.54□□□□□ -0.4
CDK5RAP3-225ENST00000582482 CLSTN2Q9H4D0 955 aa12.54□□□□□ -0.4
CDK5RAP3-225ENST00000582482 SRP68Q9UHB9 627 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP3-225ENST00000582482 CDHR2Q9BYE9 1310 aa12.54□□□□□ -0.4
CDK5RAP3-225ENST00000582482 BIN1O00499 593 aa12.53□□□□□ -0.4
CDK5RAP3-225ENST00000582482 OFD1O75665 1012 aa12.53□□□□□ -0.4
CDK5RAP3-225ENST00000582482 CCDC192P0DO97 292 aa12.53□□□□□ -0.4
CDK5RAP3-225ENST00000582482 ERFEQ4G0M1 354 aa12.53□□□□□ -0.4
CDK5RAP3-225ENST00000582482 SPATA31A1Q5TZJ5 1347 aa12.53□□□□□ -0.4
CDK5RAP3-225ENST00000582482 GUCY1A2P33402 732 aa12.53□□□□□ -0.4
CDK5RAP3-225ENST00000582482 MCM5P33992 734 aa12.53□□□□□ -0.4
CDK5RAP3-225ENST00000582482 IL6STP40189 918 aaPredicted RBP12.53□□□□□ -0.4
CDK5RAP3-225ENST00000582482 ABCF2Q9UG63 623 aa12.53□□□□□ -0.4
CDK5RAP3-225ENST00000582482 ELP1O95163 1332 aa12.53□□□□□ -0.4
CDK5RAP3-225ENST00000582482 FGFR2P21802 821 aa12.52□□□□□ -0.4
CDK5RAP3-225ENST00000582482 SNW1Q13573 536 aaKnown RBP12.52□□□□□ -0.4
CDK5RAP3-225ENST00000582482 PUM3Q15397 648 aaKnown RBP12.52□□□□□ -0.4
CDK5RAP3-225ENST00000582482 CSPP1Q1MSJ5 1256 aa12.52□□□□□ -0.4
CDK5RAP3-225ENST00000582482 FSIP1Q8NA03 581 aa12.52□□□□□ -0.4
CDK5RAP3-225ENST00000582482 LINC00116Q8NCU8 138 aa12.52□□□□□ -0.4
CDK5RAP3-225ENST00000582482 NCOA7Q8NI08 942 aa12.52□□□□□ -0.4
CDK5RAP3-225ENST00000582482 AIDAQ96BJ3 306 aa12.52□□□□□ -0.4
CDK5RAP3-225ENST00000582482 STRBPQ96SI9 672 aaKnown RBP12.52□□□□□ -0.4
CDK5RAP3-225ENST00000582482 PCDHA7Q9UN72 937 aa12.52□□□□□ -0.4
CDK5RAP3-225ENST00000582482 ANKRD36CQ5JPF3 1778 aa12.52□□□□□ -0.41
CDK5RAP3-225ENST00000582482 HMGB1P09429 215 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP3-225ENST00000582482 NDUFA8P51970 172 aa12.52□□□□□ -0.41
CDK5RAP3-225ENST00000582482 SPECC1Q5M775 1068 aa12.52□□□□□ -0.41
CDK5RAP3-225ENST00000582482 C8orf76Q96K31 380 aa12.52□□□□□ -0.41
CDK5RAP3-225ENST00000582482 UTP14AQ9BVJ6 771 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP3-225ENST00000582482 CPLX1O14810 134 aa12.51□□□□□ -0.41
CDK5RAP3-225ENST00000582482 RANBP6O60518 1105 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-225ENST00000582482 PRDM1O75626 825 aa12.51□□□□□ -0.41
CDK5RAP3-225ENST00000582482 NTSR2O95665 410 aa12.51□□□□□ -0.41
CDK5RAP3-225ENST00000582482 CHRNDQ07001 517 aa12.51□□□□□ -0.41
CDK5RAP3-225ENST00000582482 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.51□□□□□ -0.41
CDK5RAP3-225ENST00000582482 MYH15Q9Y2K3 1946 aa12.51□□□□□ -0.41
CDK5RAP3-225ENST00000582482 ZNF500O60304 480 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-225ENST00000582482 DYNLL1P63167 89 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-225ENST00000582482 NFXL1Q6ZNB6 911 aa12.51□□□□□ -0.41
CDK5RAP3-225ENST00000582482 ZNF274Q96GC6 653 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-225ENST00000582482 C8orf37Q96NL8 207 aa12.51□□□□□ -0.41
CDK5RAP3-225ENST00000582482 ZSWIM5Q9P217 1185 aa12.51□□□□□ -0.41
CDK5RAP3-225ENST00000582482 MROH7-TTC4A0A0A0MT08 1334 aa12.51□□□□□ -0.41
CDK5RAP3-225ENST00000582482 BAZ2BQ9UIF8 2168 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-225ENST00000582482 COL14A1Q05707 1796 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-225ENST00000582482 DNTTIP2Q5QJE6 756 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-225ENST00000582482 FAM200AQ8TCP9 573 aa12.5□□□□□ -0.41
CDK5RAP3-225ENST00000582482 LPIN2Q92539 896 aa12.5□□□□□ -0.41
CDK5RAP3-225ENST00000582482 CLIC6Q96NY7 704 aa12.5□□□□□ -0.41
CDK5RAP3-225ENST00000582482 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.5□□□□□ -0.418e-7■■■□□ 17.9
CDK5RAP3-225ENST00000582482 MINDY4BA8MYZ0 360 aa12.5□□□□□ -0.41
CDK5RAP3-225ENST00000582482 ARID4AP29374 1257 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP3-225ENST00000582482 ZNF165P49910 485 aa12.5□□□□□ -0.41
CDK5RAP3-225ENST00000582482 CCDC144BQ3MJ40 725 aa12.5□□□□□ -0.41
CDK5RAP3-225ENST00000582482 SAMD1Q6SPF0 538 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP3-225ENST00000582482 IFNL3Q8IZI9 196 aa12.5□□□□□ -0.41
CDK5RAP3-225ENST00000582482 CELF1Q92879 486 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-225ENST00000582482 GPR101Q96P66 508 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP3-225ENST00000582482 TFCP2L1Q9NZI6 479 aa12.5□□□□□ -0.41
CDK5RAP3-225ENST00000582482 CTNNA3Q9UI47 895 aa12.5□□□□□ -0.41
CDK5RAP3-225ENST00000582482 KCNJ14Q9UNX9 436 aa12.5□□□□□ -0.41
CDK5RAP3-225ENST00000582482 PLCH1Q4KWH8 1693 aa12.5□□□□□ -0.41
CDK5RAP3-225ENST00000582482 PLEKHG2Q9H7P9 1386 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms