RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 ELL2O00472 640 aaPredicted RBP9.8□□□□□ -0.84
CCDC47-205ENST00000582331 KLRK1P26718 216 aa9.8□□□□□ -0.84
CCDC47-205ENST00000582331 KCNJ4P48050 445 aa9.8□□□□□ -0.84
CCDC47-205ENST00000582331 RASA3Q14644 834 aa9.8□□□□□ -0.84
CCDC47-205ENST00000582331 TAF1CQ15572 869 aaPredicted RBP9.8□□□□□ -0.84
CCDC47-205ENST00000582331 CFAP100Q494V2 611 aa9.8□□□□□ -0.84
CCDC47-205ENST00000582331 DPF3Q92784 378 aa9.8□□□□□ -0.84
CCDC47-205ENST00000582331 RNF25Q96BH1 459 aaPredicted RBP9.8□□□□□ -0.84
CCDC47-205ENST00000582331 RUNDC1Q96C34 613 aa9.8□□□□□ -0.84
CCDC47-205ENST00000582331 OPTNQ96CV9 577 aa9.8□□□□□ -0.84
CCDC47-205ENST00000582331 MS4A4AQ96JQ5 239 aa9.8□□□□□ -0.84
CCDC47-205ENST00000582331 PRMT6Q96LA8 375 aaPredicted RBP9.8□□□□□ -0.84
CCDC47-205ENST00000582331 ELP3Q9H9T3 547 aa9.8□□□□□ -0.84
CCDC47-205ENST00000582331 MBIPQ9NS73 344 aa9.8□□□□□ -0.84
CCDC47-205ENST00000582331 MAP3K2Q9Y2U5 619 aa9.8□□□□□ -0.84
CCDC47-205ENST00000582331 PCDHAC2Q9Y5I4 1007 aa9.8□□□□□ -0.84
CCDC47-205ENST00000582331 LAMB1P07942 1786 aa9.8□□□□□ -0.84
CCDC47-205ENST00000582331 F8W031 263 aaPredicted RBP9.79□□□□□ -0.84
CCDC47-205ENST00000582331 WDHD1O75717 1129 aaPredicted RBP9.79□□□□□ -0.84
CCDC47-205ENST00000582331 KIF22Q14807 665 aa9.79□□□□□ -0.84
CCDC47-205ENST00000582331 CERS5Q8N5B7 392 aa9.79□□□□□ -0.84
CCDC47-205ENST00000582331 SH3TC2Q8TF17 1288 aa9.79□□□□□ -0.84
CCDC47-205ENST00000582331 BRI3BPQ8WY22 251 aa9.79□□□□□ -0.84
CCDC47-205ENST00000582331 FAM163AQ96GL9 167 aaPredicted RBP9.79□□□□□ -0.84
CCDC47-205ENST00000582331 MPHOSPH8Q99549 860 aa9.79□□□□□ -0.84
CCDC47-205ENST00000582331 RBM27Q9P2N5 1060 aaKnown RBP9.79□□□□□ -0.84
CCDC47-205ENST00000582331 SZT2Q5T011 3432 aa9.78□□□□□ -0.84
CCDC47-205ENST00000582331 CCL15-CCL14A0A0B4J2E2 113 aa9.78□□□□□ -0.84
CCDC47-205ENST00000582331 POTEMA6NI47 508 aa9.78□□□□□ -0.84
CCDC47-205ENST00000582331 IGKV5-2P06315 115 aa9.78□□□□□ -0.84
CCDC47-205ENST00000582331 GTF2A2P52657 109 aa9.78□□□□□ -0.84
CCDC47-205ENST00000582331 RBM5P52756 815 aaKnown RBP eCLIP9.78□□□□□ -0.84
CCDC47-205ENST00000582331 FKBP1AP62942 108 aaKnown RBP9.78□□□□□ -0.84
CCDC47-205ENST00000582331 NEXNQ0ZGT2 675 aa9.78□□□□□ -0.84
CCDC47-205ENST00000582331 CCL15Q16663 113 aa9.78□□□□□ -0.84
CCDC47-205ENST00000582331 CHMP4AQ9BY43 222 aa9.78□□□□□ -0.84
CCDC47-205ENST00000582331 SPEF2Q9C093 1822 aa9.77□□□□□ -0.84
CCDC47-205ENST00000582331 GNRH1P01148 92 aa9.77□□□□□ -0.85
CCDC47-205ENST00000582331 ZNF853P0CG23 659 aa9.77□□□□□ -0.85
CCDC47-205ENST00000582331 ITGA6P23229 1130 aa9.77□□□□□ -0.85
CCDC47-205ENST00000582331 PRMT2P55345 433 aa9.77□□□□□ -0.85
CCDC47-205ENST00000582331 CHRNDQ07001 517 aa9.77□□□□□ -0.85
CCDC47-205ENST00000582331 TNFAIP1Q13829 316 aa9.77□□□□□ -0.85
CCDC47-205ENST00000582331 CCDC30Q5VVM6 783 aa9.77□□□□□ -0.85
CCDC47-205ENST00000582331 KSR2Q6VAB6 950 aa9.77□□□□□ -0.85
CCDC47-205ENST00000582331 FAM43AQ8N2R8 423 aa9.77□□□□□ -0.85
CCDC47-205ENST00000582331 AOX1Q06278 1338 aa9.77□□□□□ -0.85
CCDC47-205ENST00000582331 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.76□□□□□ -0.85
CCDC47-205ENST00000582331 PI4KAP2A4QPH2 592 aa9.76□□□□□ -0.85
CCDC47-205ENST00000582331 H7C1W4 665 aa9.76□□□□□ -0.85
CCDC47-205ENST00000582331 TLR2O60603 784 aa9.76□□□□□ -0.85
CCDC47-205ENST00000582331 IL1R1P14778 569 aa9.76□□□□□ -0.85
CCDC47-205ENST00000582331 GNAI1P63096 354 aa9.76□□□□□ -0.85
CCDC47-205ENST00000582331 MAP3K9P80192 1104 aa9.76□□□□□ -0.85
CCDC47-205ENST00000582331 LACTBP83111 547 aaPredicted RBP9.76□□□□□ -0.85
CCDC47-205ENST00000582331 WDR43Q15061 677 aaKnown RBP eCLIP9.76□□□□□ -0.85
CCDC47-205ENST00000582331 RALBP1Q15311 655 aa9.76□□□□□ -0.85
CCDC47-205ENST00000582331 CWF19L2Q2TBE0 894 aaKnown RBP9.76□□□□□ -0.85
CCDC47-205ENST00000582331 POTEGQ6S5H5 508 aa9.76□□□□□ -0.85
CCDC47-205ENST00000582331 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.76□□□□□ -0.85
CCDC47-205ENST00000582331 C15orf52Q6ZUT6 534 aaKnown RBP9.76□□□□□ -0.85
CCDC47-205ENST00000582331 UBE3BQ7Z3V4 1068 aa9.76□□□□□ -0.85
CCDC47-205ENST00000582331 EFCAB3Q8N7B9 438 aa9.76□□□□□ -0.85
CCDC47-205ENST00000582331 PI4KAP1Q8N8J0 262 aa9.76□□□□□ -0.85
CCDC47-205ENST00000582331 C8orf58Q8NAV2 365 aa9.76□□□□□ -0.85
CCDC47-205ENST00000582331 ZFP91Q96JP5 570 aaPredicted RBP9.76□□□□□ -0.85
CCDC47-205ENST00000582331 ARHGAP39Q9C0H5 1083 aa9.76□□□□□ -0.85
CCDC47-205ENST00000582331 IFT57Q9NWB7 429 aa9.76□□□□□ -0.85
CCDC47-205ENST00000582331 CSADQ9Y600 493 aa9.76□□□□□ -0.85
CCDC47-205ENST00000582331 ECM29Q5VYK3 1845 aa9.76□□□□□ -0.85
CCDC47-205ENST00000582331 NEURL1BA8MQ27 555 aa9.75□□□□□ -0.85
CCDC47-205ENST00000582331 SNAP23O00161 211 aa9.75□□□□□ -0.85
CCDC47-205ENST00000582331 TAF5LO75529 589 aa9.75□□□□□ -0.85
CCDC47-205ENST00000582331 ECM2O94769 699 aaPredicted RBP9.75□□□□□ -0.85
CCDC47-205ENST00000582331 CSF1RP07333 972 aa9.75□□□□□ -0.85
CCDC47-205ENST00000582331 VGLL4Q14135 290 aa9.75□□□□□ -0.85
CCDC47-205ENST00000582331 MTFR1Q15390 333 aa9.75□□□□□ -0.85
CCDC47-205ENST00000582331 ZNF804AQ7Z570 1209 aa9.75□□□□□ -0.85
CCDC47-205ENST00000582331 NKX2-3Q8TAU0 364 aa9.75□□□□□ -0.85
CCDC47-205ENST00000582331 SHISA4Q96DD7 197 aa9.75□□□□□ -0.85
CCDC47-205ENST00000582331 HTATIP2Q9BUP3 242 aa9.75□□□□□ -0.85
CCDC47-205ENST00000582331 PLA2G12BQ9BX93 195 aa9.75□□□□□ -0.85
CCDC47-205ENST00000582331 ZCCHC17Q9NP64 241 aaKnown RBP9.75□□□□□ -0.85
CCDC47-205ENST00000582331 ZNF70Q9UC06 446 aaPredicted RBP9.75□□□□□ -0.85
CCDC47-205ENST00000582331 NR2E3Q9Y5X4 410 aa9.75□□□□□ -0.85
CCDC47-205ENST00000582331 MYH3P11055 1940 aa9.75□□□□□ -0.85
CCDC47-205ENST00000582331 IRS2Q9Y4H2 1338 aa9.75□□□□□ -0.85
CCDC47-205ENST00000582331 ANKRD18BA2A2Z9 1011 aa9.74□□□□□ -0.85
CCDC47-205ENST00000582331 SNPHO15079 494 aa9.74□□□□□ -0.85
CCDC47-205ENST00000582331 CETPP11597 493 aa9.74□□□□□ -0.85
CCDC47-205ENST00000582331 HOXD10P28358 340 aa9.74□□□□□ -0.85
CCDC47-205ENST00000582331 TNNI2P48788 182 aa9.74□□□□□ -0.85
CCDC47-205ENST00000582331 CALD1Q05682 793 aaKnown RBP9.74□□□□□ -0.85
CCDC47-205ENST00000582331 HELBQ8NG08 1087 aaPredicted RBP9.74□□□□□ -0.85
CCDC47-205ENST00000582331 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.74□□□□□ -0.85
CCDC47-205ENST00000582331 TEPSINQ96N21 525 aa9.74□□□□□ -0.85
CCDC47-205ENST00000582331 PRO3102Q9H379 93 aa9.74□□□□□ -0.85
CCDC47-205ENST00000582331 TDRD3Q9H7E2 651 aaKnown RBP9.74□□□□□ -0.85
CCDC47-205ENST00000582331 ADAMTS8Q9UP79 889 aa9.74□□□□□ -0.85
CCDC47-205ENST00000582331 JAG2Q9Y219 1238 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms