RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 CD209Q9NNX6 404 aa16.51■□□□□ 0.23
CSNK1D-220ENST00000581737 ZBTB47Q9UFB7 747 aaPredicted RBP16.51■□□□□ 0.23
CSNK1D-220ENST00000581737 APBB1O00213 710 aa16.5■□□□□ 0.23
CSNK1D-220ENST00000581737 SLC10A3P09131 477 aa16.5■□□□□ 0.23
CSNK1D-220ENST00000581737 IL1R1P14778 569 aa16.5■□□□□ 0.23
CSNK1D-220ENST00000581737 C2orf69Q8N8R5 385 aa16.5■□□□□ 0.23
CSNK1D-220ENST00000581737 USP17L3A6NCW0 530 aa16.49■□□□□ 0.23
CSNK1D-220ENST00000581737 USP17L4A6NCW7 530 aa16.49■□□□□ 0.23
CSNK1D-220ENST00000581737 SEMA3EO15041 775 aa16.49■□□□□ 0.23
CSNK1D-220ENST00000581737 FRAT2O75474 233 aaPredicted RBP16.49■□□□□ 0.23
CSNK1D-220ENST00000581737 TIMM10P62072 90 aa16.49■□□□□ 0.23
CSNK1D-220ENST00000581737 USP17L1Q7RTZ2 530 aa16.49■□□□□ 0.23
CSNK1D-220ENST00000581737 CCDC102AQ96A19 550 aa16.49■□□□□ 0.23
CSNK1D-220ENST00000581737 XAGE2Q96GT9 111 aa16.49■□□□□ 0.23
CSNK1D-220ENST00000581737 SCAF8Q9UPN6 1271 aaKnown RBP16.49■□□□□ 0.23
CSNK1D-220ENST00000581737 MYO3BQ8WXR4 1341 aa16.48■□□□□ 0.23
CSNK1D-220ENST00000581737 ZBTB22O15209 634 aa16.48■□□□□ 0.23
CSNK1D-220ENST00000581737 ADORA1P30542 326 aa16.48■□□□□ 0.23
CSNK1D-220ENST00000581737 BCAMP50895 628 aa16.48■□□□□ 0.23
CSNK1D-220ENST00000581737 KIF4BQ2VIQ3 1234 aa16.48■□□□□ 0.23
CSNK1D-220ENST00000581737 STRIP1Q5VSL9 837 aa16.48■□□□□ 0.23
CSNK1D-220ENST00000581737 AACSQ86V21 672 aa16.48■□□□□ 0.23
CSNK1D-220ENST00000581737 TDRD7Q8NHU6 1098 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-220ENST00000581737 DCPSQ96C86 337 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-220ENST00000581737 CDCA5Q96FF9 252 aa16.48■□□□□ 0.23
CSNK1D-220ENST00000581737 IL1RAPL2Q9NP60 686 aa16.48■□□□□ 0.23
CSNK1D-220ENST00000581737 GGA3Q9NZ52 723 aa16.48■□□□□ 0.23
CSNK1D-220ENST00000581737 MKI67P46013 3256 aaKnown RBP16.47■□□□□ 0.23
CSNK1D-220ENST00000581737 IFIT2P09913 472 aaKnown RBP16.47■□□□□ 0.23
CSNK1D-220ENST00000581737 RPS12P25398 132 aaKnown RBP16.47■□□□□ 0.23
CSNK1D-220ENST00000581737 CCDC158Q5M9N0 1113 aa16.47■□□□□ 0.23
CSNK1D-220ENST00000581737 CCDC102BQ68D86 513 aa16.47■□□□□ 0.23
CSNK1D-220ENST00000581737 MOB2Q70IA6 237 aa16.47■□□□□ 0.23
CSNK1D-220ENST00000581737 RASAL3Q86YV0 1011 aa16.47■□□□□ 0.23
CSNK1D-220ENST00000581737 FBXW7Q969H0 707 aa16.47■□□□□ 0.23
CSNK1D-220ENST00000581737 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.47■□□□□ 0.23
CSNK1D-220ENST00000581737 ZNF646O15015 1829 aaPredicted RBP16.47■□□□□ 0.23
CSNK1D-220ENST00000581737 FAM205AQ6ZU69 1335 aa16.46■□□□□ 0.23
CSNK1D-220ENST00000581737 IGHDP01880 384 aa16.46■□□□□ 0.23
CSNK1D-220ENST00000581737 VIL1P09327 827 aaKnown RBP16.46■□□□□ 0.23
CSNK1D-220ENST00000581737 UQCRFS1P1P0C7P4 283 aa16.46■□□□□ 0.23
CSNK1D-220ENST00000581737 PHKA1P46020 1223 aa16.46■□□□□ 0.23
CSNK1D-220ENST00000581737 GTF2IP78347 998 aa16.46■□□□□ 0.23
CSNK1D-220ENST00000581737 TTLL5Q6EMB2 1281 aa16.46■□□□□ 0.23
CSNK1D-220ENST00000581737 EAF2Q96CJ1 260 aaPredicted RBP16.46■□□□□ 0.23
CSNK1D-220ENST00000581737 PDS5AQ29RF7 1337 aaKnown RBP16.45■□□□□ 0.22
CSNK1D-220ENST00000581737 FKBP1AP62942 108 aaKnown RBP16.45■□□□□ 0.22
CSNK1D-220ENST00000581737 TTC39AQ5SRH9 613 aa16.45■□□□□ 0.22
CSNK1D-220ENST00000581737 DACT2Q5SW24 774 aa16.45■□□□□ 0.22
CSNK1D-220ENST00000581737 ANGEL2Q5VTE6 544 aaKnown RBP16.45■□□□□ 0.22
CSNK1D-220ENST00000581737 RSBN1LQ6PCB5 846 aaPredicted RBP16.45■□□□□ 0.22
CSNK1D-220ENST00000581737 CTU1Q7Z7A3 348 aaKnown RBP16.45■□□□□ 0.22
CSNK1D-220ENST00000581737 SMC5Q8IY18 1101 aa16.45■□□□□ 0.22
CSNK1D-220ENST00000581737 TBC1D22AQ8WUA7 517 aa16.45■□□□□ 0.22
CSNK1D-220ENST00000581737 DBNDD2Q9BQY9 259 aa16.45■□□□□ 0.22
CSNK1D-220ENST00000581737 DBNLQ9UJU6 430 aaKnown RBP16.45■□□□□ 0.22
CSNK1D-220ENST00000581737 DENND2AQ9ULE3 1009 aa16.45■□□□□ 0.22
CSNK1D-220ENST00000581737 HPS5Q9UPZ3 1129 aa16.45■□□□□ 0.22
CSNK1D-220ENST00000581737 MMP14P50281 582 aa16.44■□□□□ 0.22
CSNK1D-220ENST00000581737 SCARF1Q14162 830 aa16.44■□□□□ 0.22
CSNK1D-220ENST00000581737 SULF1Q8IWU6 871 aa16.44■□□□□ 0.22
CSNK1D-220ENST00000581737 AGBL3Q8NEM8 1001 aa16.44■□□□□ 0.22
CSNK1D-220ENST00000581737 WDR66Q8TBY9 1149 aa16.44■□□□□ 0.22
CSNK1D-220ENST00000581737 GPATCH3Q96I76 525 aa16.44■□□□□ 0.22
CSNK1D-220ENST00000581737 CCDC8Q9H0W5 538 aaPredicted RBP16.44■□□□□ 0.22
CSNK1D-220ENST00000581737 RBM19Q9Y4C8 960 aaKnown RBP16.44■□□□□ 0.22
CSNK1D-220ENST00000581737 BRCA2P51587 3418 aa16.44■□□□□ 0.22
CSNK1D-220ENST00000581737 HTTP42858 3142 aa16.43■□□□□ 0.22
CSNK1D-220ENST00000581737 ARID4AP29374 1257 aaPredicted RBP16.43■□□□□ 0.22
CSNK1D-220ENST00000581737 RGS3P49796 1198 aa16.43■□□□□ 0.22
CSNK1D-220ENST00000581737 ZNF280AP59817 542 aaPredicted RBP16.43■□□□□ 0.22
CSNK1D-220ENST00000581737 CHAF1AQ13111 956 aaPredicted RBP16.43■□□□□ 0.22
CSNK1D-220ENST00000581737 PRPF38BQ5VTL8 546 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-220ENST00000581737 PRAMEF18Q5VWM3 479 aa16.43■□□□□ 0.22
CSNK1D-220ENST00000581737 ZNF512BQ96KM6 892 aaPredicted RBP16.43■□□□□ 0.22
CSNK1D-220ENST00000581737 IQSEC3Q9UPP2 1182 aaPredicted RBP16.43■□□□□ 0.22
CSNK1D-220ENST00000581737 SMARCA5O60264 1052 aaPredicted RBP16.42■□□□□ 0.22
CSNK1D-220ENST00000581737 TBC1D8O95759 1140 aa16.42■□□□□ 0.22
CSNK1D-220ENST00000581737 RASGRF1Q13972 1273 aa16.42■□□□□ 0.22
CSNK1D-220ENST00000581737 MFSD14BQ5SR56 506 aa16.42■□□□□ 0.22
CSNK1D-220ENST00000581737 ANKRD45Q5TZF3 282 aa16.42■□□□□ 0.22
CSNK1D-220ENST00000581737 ZGPATQ8N5A5 531 aaKnown RBP16.42■□□□□ 0.22
CSNK1D-220ENST00000581737 BCL11AQ9H165 835 aa16.42■□□□□ 0.22
CSNK1D-220ENST00000581737 TLR7Q9NYK1 1049 aaKnown RBP16.42■□□□□ 0.22
CSNK1D-220ENST00000581737 POLR2AP24928 1970 aaKnown RBP16.42■□□□□ 0.22
CSNK1D-220ENST00000581737 PDE4DIPQ5VU43 2346 aa16.41■□□□□ 0.22
CSNK1D-220ENST00000581737 CENPFP49454 3210 aa16.41■□□□□ 0.22
CSNK1D-220ENST00000581737 OGFOD1Q8N543 542 aa16.41■□□□□ 0.22
CSNK1D-220ENST00000581737 ZNF296Q8WUU4 475 aaPredicted RBP16.41■□□□□ 0.22
CSNK1D-220ENST00000581737 GMLQ99445 158 aa16.41■□□□□ 0.22
CSNK1D-220ENST00000581737 SUGT1Q9Y2Z0 365 aa16.41■□□□□ 0.22
CSNK1D-220ENST00000581737 COL1A1P02452 1464 aaPredicted RBP16.41■□□□□ 0.22
CSNK1D-220ENST00000581737 UBE2Q2LH0YL09 131 aa16.4■□□□□ 0.22
CSNK1D-220ENST00000581737 EIF5BO60841 1220 aaKnown RBP16.4■□□□□ 0.22
CSNK1D-220ENST00000581737 USP17L8P0C7I0 530 aa16.4■□□□□ 0.22
CSNK1D-220ENST00000581737 SPATA5Q8NB90 893 aa16.4■□□□□ 0.22
CSNK1D-220ENST00000581737 R3HDMLQ9H3Y0 253 aa16.4■□□□□ 0.22
CSNK1D-220ENST00000581737 HDAC9Q9UKV0 1011 aa16.4■□□□□ 0.22
CSNK1D-220ENST00000581737 AKAP11Q9UKA4 1901 aa16.4■□□□□ 0.22
CSNK1D-220ENST00000581737 MAST3O60307 1309 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms