RNA–Protein interactions for RNA: ENST00000581514.1

SCN4A-202, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

TSL 3

Gene SCN4A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-202ENST00000581514 OTOP1Q7RTM1 612 aa18.7■□□□□ 0.58
SCN4A-202ENST00000581514 VPS37DQ86XT2 251 aa18.7■□□□□ 0.58
SCN4A-202ENST00000581514 CDAN1Q8IWY9 1227 aa18.7■□□□□ 0.58
SCN4A-202ENST00000581514 MRPL50Q8N5N7 158 aaKnown RBP18.7■□□□□ 0.58
SCN4A-202ENST00000581514 ANKRD44Q8N8A2 993 aa18.7■□□□□ 0.58
SCN4A-202ENST00000581514 TEPSINQ96N21 525 aa18.7■□□□□ 0.58
SCN4A-202ENST00000581514 IQSEC3Q9UPP2 1182 aaPredicted RBP18.7■□□□□ 0.58
SCN4A-202ENST00000581514 TESPA1A2RU30 521 aaPredicted RBP18.69■□□□□ 0.58
SCN4A-202ENST00000581514 TCP10L2B9ZVM9 353 aa18.69■□□□□ 0.58
SCN4A-202ENST00000581514 CHAF1AQ13111 956 aaPredicted RBP18.69■□□□□ 0.58
SCN4A-202ENST00000581514 CRHR2Q13324 411 aa18.69■□□□□ 0.58
SCN4A-202ENST00000581514 METTL24Q5JXM2 366 aa18.69■□□□□ 0.58
SCN4A-202ENST00000581514 PRPF38BQ5VTL8 546 aaKnown RBP18.69■□□□□ 0.58
SCN4A-202ENST00000581514 OPTNQ96CV9 577 aa18.69■□□□□ 0.58
SCN4A-202ENST00000581514 PTPN18Q99952 460 aa18.69■□□□□ 0.58
SCN4A-202ENST00000581514 ELP3Q9H9T3 547 aa18.69■□□□□ 0.58
SCN4A-202ENST00000581514 TNNI2P48788 182 aa18.68■□□□□ 0.58
SCN4A-202ENST00000581514 CAVIN4Q5BKX8 364 aa18.68■□□□□ 0.58
SCN4A-202ENST00000581514 VGLL2Q8N8G2 317 aa18.68■□□□□ 0.58
SCN4A-202ENST00000581514 TBC1D22AQ8WUA7 517 aa18.68■□□□□ 0.58
SCN4A-202ENST00000581514 ERO1AQ96HE7 468 aa18.68■□□□□ 0.58
SCN4A-202ENST00000581514 TMEM39BQ9GZU3 492 aa18.68■□□□□ 0.58
SCN4A-202ENST00000581514 FRAT2O75474 233 aaPredicted RBP18.67■□□□□ 0.58
SCN4A-202ENST00000581514 PDE8BO95263 885 aa18.67■□□□□ 0.58
SCN4A-202ENST00000581514 HDLBPQ00341 1268 aaKnown RBP18.67■□□□□ 0.58
SCN4A-202ENST00000581514 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.67■□□□□ 0.58
SCN4A-202ENST00000581514 CD99L2Q8TCZ2 262 aa18.67■□□□□ 0.58
SCN4A-202ENST00000581514 MS4A4AQ96JQ5 239 aa18.67■□□□□ 0.58
SCN4A-202ENST00000581514 PTPRCP08575 1304 aa18.67■□□□□ 0.58
SCN4A-202ENST00000581514 KLHDC4Q8TBB5 520 aa18.66■□□□□ 0.58
SCN4A-202ENST00000581514 CNKSR2Q8WXI2 1034 aa18.66■□□□□ 0.58
SCN4A-202ENST00000581514 CENPFP49454 3210 aa18.66■□□□□ 0.58
SCN4A-202ENST00000581514 BCAMP50895 628 aa18.65■□□□□ 0.58
SCN4A-202ENST00000581514 MAP3K9P80192 1104 aa18.65■□□□□ 0.58
SCN4A-202ENST00000581514 VGLL4Q14135 290 aa18.65■□□□□ 0.58
SCN4A-202ENST00000581514 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.65■□□□□ 0.58
SCN4A-202ENST00000581514 TEKT1Q969V4 418 aa18.65■□□□□ 0.58
SCN4A-202ENST00000581514 SP3Q02447 781 aa18.64■□□□□ 0.57
SCN4A-202ENST00000581514 INTS3Q68E01 1043 aaKnown RBP18.64■□□□□ 0.57
SCN4A-202ENST00000581514 BRI3BPQ8WY22 251 aa18.64■□□□□ 0.57
SCN4A-202ENST00000581514 SSH1Q8WYL5 1049 aa18.64■□□□□ 0.57
SCN4A-202ENST00000581514 USP44Q9H0E7 712 aa18.64■□□□□ 0.57
SCN4A-202ENST00000581514 PTPN22Q9Y2R2 807 aa18.64■□□□□ 0.57
SCN4A-202ENST00000581514 CSADQ9Y600 493 aa18.64■□□□□ 0.57
SCN4A-202ENST00000581514 KIF16BQ96L93 1317 aa18.64■□□□□ 0.57
SCN4A-202ENST00000581514 MYH13Q9UKX3 1938 aa18.63■□□□□ 0.57
SCN4A-202ENST00000581514 E9PSI1 815 aa18.63■□□□□ 0.57
SCN4A-202ENST00000581514 FGFR2P21802 821 aa18.63■□□□□ 0.57
SCN4A-202ENST00000581514 CACNB3P54284 484 aa18.63■□□□□ 0.57
SCN4A-202ENST00000581514 PUM3Q15397 648 aaKnown RBP18.63■□□□□ 0.57
SCN4A-202ENST00000581514 ZDHHC15Q96MV8 337 aa18.63■□□□□ 0.57
SCN4A-202ENST00000581514 MRIQ9BWK5 157 aa18.63■□□□□ 0.57
SCN4A-202ENST00000581514 EFCC1Q9HA90 598 aa18.63■□□□□ 0.57
SCN4A-202ENST00000581514 MKI67P46013 3256 aaKnown RBP18.62■□□□□ 0.57
SCN4A-202ENST00000581514 CCL15-CCL14A0A0B4J2E2 113 aa18.62■□□□□ 0.57
SCN4A-202ENST00000581514 IFIT1P09914 478 aaKnown RBP18.62■□□□□ 0.57
SCN4A-202ENST00000581514 GTF2A2P52657 109 aa18.62■□□□□ 0.57
SCN4A-202ENST00000581514 CAP1Q01518 475 aa18.62■□□□□ 0.57
SCN4A-202ENST00000581514 CCL15Q16663 113 aa18.62■□□□□ 0.57
SCN4A-202ENST00000581514 OTUD5Q96G74 571 aa18.62■□□□□ 0.57
SCN4A-202ENST00000581514 TMOD2Q9NZR1 351 aa18.62■□□□□ 0.57
SCN4A-202ENST00000581514 SUGT1Q9Y2Z0 365 aa18.62■□□□□ 0.57
SCN4A-202ENST00000581514 MAST3O60307 1309 aa18.62■□□□□ 0.57
SCN4A-202ENST00000581514 RBBP6Q7Z6E9 1792 aaKnown RBP18.62■□□□□ 0.57
SCN4A-202ENST00000581514 POTEFA5A3E0 1075 aa18.61■□□□□ 0.57
SCN4A-202ENST00000581514 TAF1CQ15572 869 aaPredicted RBP18.61■□□□□ 0.57
SCN4A-202ENST00000581514 FKBP1CQ5VVH2 108 aa18.61■□□□□ 0.57
SCN4A-202ENST00000581514 APOBEC3HQ6NTF7 200 aaKnown RBP18.61■□□□□ 0.57
SCN4A-202ENST00000581514 FAM83AQ86UY5 434 aa18.61■□□□□ 0.57
SCN4A-202ENST00000581514 KIAA0100Q14667 2235 aaKnown RBP18.61■□□□□ 0.57
SCN4A-202ENST00000581514 SPDYE5A6NIY4 337 aa18.6■□□□□ 0.57
SCN4A-202ENST00000581514 EYA2O00167 538 aa18.6■□□□□ 0.57
SCN4A-202ENST00000581514 RFX5P48382 616 aaPredicted RBP18.6■□□□□ 0.57
SCN4A-202ENST00000581514 ARMC5Q96C12 935 aa18.6■□□□□ 0.57
SCN4A-202ENST00000581514 ZFYVE28Q9HCC9 887 aa18.6■□□□□ 0.57
SCN4A-202ENST00000581514 SNCAIPQ9Y6H5 919 aa18.6■□□□□ 0.57
SCN4A-202ENST00000581514 SLC5A1P13866 664 aa18.59■□□□□ 0.57
SCN4A-202ENST00000581514 SLFN5Q08AF3 891 aa18.59■□□□□ 0.57
SCN4A-202ENST00000581514 HHIPL2Q6UWX4 724 aa18.59■□□□□ 0.57
SCN4A-202ENST00000581514 FAM43AQ8N2R8 423 aa18.59■□□□□ 0.57
SCN4A-202ENST00000581514 HOOK2Q96ED9 719 aa18.59■□□□□ 0.57
SCN4A-202ENST00000581514 WRNIP1Q96S55 665 aa18.59■□□□□ 0.57
SCN4A-202ENST00000581514 RPAP1Q9BWH6 1393 aaPredicted RBP18.58■□□□□ 0.57
SCN4A-202ENST00000581514 ALDH1L2Q3SY69 923 aa18.58■□□□□ 0.56
SCN4A-202ENST00000581514 ERO1BQ86YB8 467 aa18.58■□□□□ 0.56
SCN4A-202ENST00000581514 WDR66Q8TBY9 1149 aa18.58■□□□□ 0.56
SCN4A-202ENST00000581514 LPIN2Q92539 896 aa18.58■□□□□ 0.56
SCN4A-202ENST00000581514 ZKSCAN4Q969J2 545 aaPredicted RBP18.58■□□□□ 0.56
SCN4A-202ENST00000581514 PCDH10Q9P2E7 1040 aa18.58■□□□□ 0.56
SCN4A-202ENST00000581514 CETPP11597 493 aa18.57■□□□□ 0.56
SCN4A-202ENST00000581514 ARHGEF6Q15052 776 aa18.57■□□□□ 0.56
SCN4A-202ENST00000581514 ATG9AQ7Z3C6 839 aa18.57■□□□□ 0.56
SCN4A-202ENST00000581514 BRCA2P51587 3418 aa18.56■□□□□ 0.56
SCN4A-202ENST00000581514 DCAF15Q66K64 600 aa18.56■□□□□ 0.56
SCN4A-202ENST00000581514 ZCCHC17Q9NP64 241 aaKnown RBP18.56■□□□□ 0.56
SCN4A-202ENST00000581514 SMC4Q9NTJ3 1288 aa18.56■□□□□ 0.56
SCN4A-202ENST00000581514 AK9Q5TCS8 1911 aa18.56■□□□□ 0.56
SCN4A-202ENST00000581514 BTBD19C9JJ37 291 aa18.55■□□□□ 0.56
SCN4A-202ENST00000581514 IRF6O14896 467 aa18.55■□□□□ 0.56
SCN4A-202ENST00000581514 WDHD1O75717 1129 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms