RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 MEI1Q5TIA1 1274 aa7.52□□□□□ -1.21
NF1-220ENST00000581113 ACAD11Q709F0 780 aa7.52□□□□□ -1.21
NF1-220ENST00000581113 MRPL18Q9H0U6 180 aaKnown RBP7.52□□□□□ -1.21
NF1-220ENST00000581113 C1QTNF9BB2RNN3 333 aa7.51□□□□□ -1.21
NF1-220ENST00000581113 CYP11A1P05108 521 aa7.51□□□□□ -1.21
NF1-220ENST00000581113 CTSHP09668 335 aa7.51□□□□□ -1.21
NF1-220ENST00000581113 NRG1Q02297 640 aaPredicted RBP7.51□□□□□ -1.21
NF1-220ENST00000581113 CD163Q86VB7 1156 aa7.51□□□□□ -1.21
NF1-220ENST00000581113 UBASH3BQ8TF42 649 aa7.51□□□□□ -1.21
NF1-220ENST00000581113 CRELD1Q96HD1 420 aa7.51□□□□□ -1.21
NF1-220ENST00000581113 CEP44Q9C0F1 390 aa7.51□□□□□ -1.21
NF1-220ENST00000581113 EIF4EBP3O60516 100 aaPredicted RBP7.5□□□□□ -1.21
NF1-220ENST00000581113 MAOBP27338 520 aa7.49□□□□□ -1.21
NF1-220ENST00000581113 MRPL58Q14197 206 aaKnown RBP7.49□□□□□ -1.21
NF1-220ENST00000581113 CCDC85BQ15834 202 aaPredicted RBP7.49□□□□□ -1.21
NF1-220ENST00000581113 PLA2G4EQ3MJ16 856 aa7.49□□□□□ -1.21
NF1-220ENST00000581113 AGGF1Q8N302 714 aaeCLIP7.49□□□□□ -1.21
NF1-220ENST00000581113 NECAB3Q96P71 396 aaPredicted RBP7.49□□□□□ -1.21
NF1-220ENST00000581113 CORO1BQ9BR76 489 aa7.49□□□□□ -1.21
NF1-220ENST00000581113 TRIM56Q9BRZ2 755 aaKnown RBP7.49□□□□□ -1.21
NF1-220ENST00000581113 LOC100289279A0A1B0GTE1 492 aa7.49□□□□□ -1.21
NF1-220ENST00000581113 ENC1O14682 589 aa7.49□□□□□ -1.21
NF1-220ENST00000581113 ALX3O95076 343 aa7.49□□□□□ -1.21
NF1-220ENST00000581113 ECEL1O95672 775 aa7.49□□□□□ -1.21
NF1-220ENST00000581113 CELA3AP09093 270 aa7.49□□□□□ -1.21
NF1-220ENST00000581113 AP3B2Q13367 1082 aa7.49□□□□□ -1.21
NF1-220ENST00000581113 MBTPS1Q14703 1052 aa7.49□□□□□ -1.21
NF1-220ENST00000581113 POU4F3Q15319 338 aa7.49□□□□□ -1.21
NF1-220ENST00000581113 TAF1CQ15572 869 aaPredicted RBP7.49□□□□□ -1.21
NF1-220ENST00000581113 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.49□□□□□ -1.21
NF1-220ENST00000581113 NRSN2Q9GZP1 204 aa7.49□□□□□ -1.21
NF1-220ENST00000581113 AKTIPQ9H8T0 292 aa7.49□□□□□ -1.21
NF1-220ENST00000581113 F8W735 103 aaPredicted RBP7.48□□□□□ -1.21
NF1-220ENST00000581113 PAGE1O75459 146 aa7.48□□□□□ -1.21
NF1-220ENST00000581113 IREB2P48200 963 aaKnown RBP7.48□□□□□ -1.21
NF1-220ENST00000581113 ADGRE1Q14246 886 aa7.48□□□□□ -1.21
NF1-220ENST00000581113 KIAA1211Q6ZU35 1233 aa7.48□□□□□ -1.21
NF1-220ENST00000581113 SULF2Q8IWU5 870 aa7.48□□□□□ -1.21
NF1-220ENST00000581113 ZNF428Q96B54 188 aa7.48□□□□□ -1.21
NF1-220ENST00000581113 MRRFQ96E11 262 aaKnown RBP7.48□□□□□ -1.21
NF1-220ENST00000581113 ZC3H12CQ9C0D7 883 aaKnown RBP7.48□□□□□ -1.21
NF1-220ENST00000581113 UNCXA6NJT0 531 aa7.47□□□□□ -1.21
NF1-220ENST00000581113 DLGAP3O95886 979 aa7.47□□□□□ -1.21
NF1-220ENST00000581113 TMEM130Q8N3G9 435 aa7.47□□□□□ -1.21
NF1-220ENST00000581113 ANKRD24Q8TF21 1146 aa7.47□□□□□ -1.21
NF1-220ENST00000581113 WFDC12Q8WWY7 111 aa7.47□□□□□ -1.21
NF1-220ENST00000581113 RUSC1Q9BVN2 902 aa7.47□□□□□ -1.21
NF1-220ENST00000581113 CBX8Q9HC52 389 aa7.47□□□□□ -1.21
NF1-220ENST00000581113 ITGB2P05107 769 aa7.46□□□□□ -1.22
NF1-220ENST00000581113 GSTP1P09211 210 aaKnown RBP7.46□□□□□ -1.22
NF1-220ENST00000581113 GLB1P16278 677 aa7.46□□□□□ -1.22
NF1-220ENST00000581113 NME2P22392 152 aa7.46□□□□□ -1.22
NF1-220ENST00000581113 NOS3P29474 1203 aa7.46□□□□□ -1.22
NF1-220ENST00000581113 ST13P50502 369 aaKnown RBP7.46□□□□□ -1.22
NF1-220ENST00000581113 PDE3AQ14432 1141 aa7.46□□□□□ -1.22
NF1-220ENST00000581113 TSNAXIP1Q2TAA8 658 aa7.46□□□□□ -1.22
NF1-220ENST00000581113 SV2BQ7L1I2 683 aa7.46□□□□□ -1.22
NF1-220ENST00000581113 TXNRD3Q86VQ6 643 aa7.46□□□□□ -1.22
NF1-220ENST00000581113 RNF208Q9H0X6 261 aa7.46□□□□□ -1.22
NF1-220ENST00000581113 SAMM50Q9Y512 469 aa7.46□□□□□ -1.22
NF1-220ENST00000581113 USP31Q70CQ4 1352 aa7.45□□□□□ -1.22
NF1-220ENST00000581113 CTSBP07858 339 aa7.45□□□□□ -1.22
NF1-220ENST00000581113 ARNTP27540 789 aa7.45□□□□□ -1.22
NF1-220ENST00000581113 RBM25P49756 843 aaKnown RBP7.45□□□□□ -1.22
NF1-220ENST00000581113 MAP3K11Q16584 847 aa7.45□□□□□ -1.22
NF1-220ENST00000581113 NUTM2GQ5VZR2 741 aa7.45□□□□□ -1.22
NF1-220ENST00000581113 TMEM87AQ8NBN3 555 aa7.45□□□□□ -1.22
NF1-220ENST00000581113 STK35Q8TDR2 534 aa7.45□□□□□ -1.22
NF1-220ENST00000581113 KCNB2Q92953 911 aa7.45□□□□□ -1.22
NF1-220ENST00000581113 BACH2Q9BYV9 841 aa7.45□□□□□ -1.22
NF1-220ENST00000581113 GATA4P43694 442 aa7.44□□□□□ -1.22
NF1-220ENST00000581113 HP1BP3Q5SSJ5 553 aaPredicted RBP7.44□□□□□ -1.22
NF1-220ENST00000581113 PCNX4Q63HM2 1172 aa7.44□□□□□ -1.22
NF1-220ENST00000581113 MAP1SQ66K74 1059 aaPredicted RBP7.44□□□□□ -1.22
NF1-220ENST00000581113 GPAT2Q6NUI2 795 aa7.44□□□□□ -1.22
NF1-220ENST00000581113 EMILIN2Q9BXX0 1053 aa7.44□□□□□ -1.22
NF1-220ENST00000581113 EXOSC6Q5RKV6 272 aaKnown RBP7.43□□□□□ -1.22
NF1-220ENST00000581113 TTBK2Q6IQ55 1244 aa7.43□□□□□ -1.22
NF1-220ENST00000581113 FDX2Q6P4F2 183 aa7.43□□□□□ -1.22
NF1-220ENST00000581113 PDZD3Q86UT5 571 aa7.43□□□□□ -1.22
NF1-220ENST00000581113 TMPRSS13Q9BYE2 586 aa7.43□□□□□ -1.22
NF1-220ENST00000581113 RAD18Q9NS91 495 aa7.43□□□□□ -1.22
NF1-220ENST00000581113 KIAA1522Q9P206 1035 aaPredicted RBP7.43□□□□□ -1.22
NF1-220ENST00000581113 BMP6P22004 513 aa7.43□□□□□ -1.22
NF1-220ENST00000581113 GRIN3AQ8TCU5 1115 aa7.43□□□□□ -1.22
NF1-220ENST00000581113 NOC4LQ9BVI4 516 aaKnown RBP7.43□□□□□ -1.22
NF1-220ENST00000581113 CEP41Q9BYV8 373 aa7.43□□□□□ -1.22
NF1-220ENST00000581113 CCDC86Q9H6F5 360 aaKnown RBP7.43□□□□□ -1.22
NF1-220ENST00000581113 CYP4F12Q9HCS2 524 aa7.43□□□□□ -1.22
NF1-220ENST00000581113 MEGF11A6BM72 1044 aa7.42□□□□□ -1.22
NF1-220ENST00000581113 F6X3S4 739 aa7.42□□□□□ -1.22
NF1-220ENST00000581113 RECKO95980 971 aa7.42□□□□□ -1.22
NF1-220ENST00000581113 LMNB1P20700 586 aa7.42□□□□□ -1.22
NF1-220ENST00000581113 LRRC14Q15048 493 aa7.42□□□□□ -1.22
NF1-220ENST00000581113 RASIP1Q5U651 963 aa7.42□□□□□ -1.22
NF1-220ENST00000581113 ANKRD34AQ69YU3 496 aa7.42□□□□□ -1.22
NF1-220ENST00000581113 LLGL2Q6P1M3 1020 aa7.42□□□□□ -1.22
NF1-220ENST00000581113 C12orf50Q8NA57 414 aaPredicted RBP7.42□□□□□ -1.22
NF1-220ENST00000581113 MEGF10Q96KG7 1140 aa7.42□□□□□ -1.22
NF1-220ENST00000581113 MSTNO14793 375 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms