RNA–Protein interactions for RNA: ENST00000580898.5

PGAP3-207, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-207ENST00000580898 ZNF296Q8WUU4 475 aaPredicted RBP16.99■□□□□ 0.31
PGAP3-207ENST00000580898 TDRD3Q9H7E2 651 aaKnown RBP16.99■□□□□ 0.31
PGAP3-207ENST00000580898 TMOD2Q9NZR1 351 aa16.99■□□□□ 0.31
PGAP3-207ENST00000580898 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.99■□□□□ 0.31
PGAP3-207ENST00000580898 SSC5DA1L4H1 1573 aa16.98■□□□□ 0.31
PGAP3-207ENST00000580898 SLC5A1P13866 664 aa16.98■□□□□ 0.31
PGAP3-207ENST00000580898 VGLL2Q8N8G2 317 aa16.98■□□□□ 0.31
PGAP3-207ENST00000580898 TEKT1Q969V4 418 aa16.98■□□□□ 0.31
PGAP3-207ENST00000580898 WNK4Q96J92 1243 aa16.98■□□□□ 0.31
PGAP3-207ENST00000580898 API5Q9BZZ5 524 aaKnown RBP16.98■□□□□ 0.31
PGAP3-207ENST00000580898 FBXO3Q9UK99 471 aa16.98■□□□□ 0.31
PGAP3-207ENST00000580898 SUGT1Q9Y2Z0 365 aa16.98■□□□□ 0.31
PGAP3-207ENST00000580898 CCER2I3L3R5 266 aa16.97■□□□□ 0.31
PGAP3-207ENST00000580898 EYA2O00167 538 aa16.97■□□□□ 0.31
PGAP3-207ENST00000580898 FKTNO75072 461 aa16.97■□□□□ 0.31
PGAP3-207ENST00000580898 LPIN2Q92539 896 aa16.97■□□□□ 0.31
PGAP3-207ENST00000580898 HOOK2Q96ED9 719 aa16.97■□□□□ 0.31
PGAP3-207ENST00000580898 FZD1Q9UP38 647 aa16.97■□□□□ 0.31
PGAP3-207ENST00000580898 IQSEC3Q9UPP2 1182 aaPredicted RBP16.97■□□□□ 0.31
PGAP3-207ENST00000580898 IFNL1Q8IU54 200 aa16.96■□□□□ 0.31
PGAP3-207ENST00000580898 KLHDC4Q8TBB5 520 aa16.96■□□□□ 0.31
PGAP3-207ENST00000580898 CDCA7LQ96GN5 454 aa16.96■□□□□ 0.31
PGAP3-207ENST00000580898 MRIQ9BWK5 157 aa16.96■□□□□ 0.31
PGAP3-207ENST00000580898 TCP10L2B9ZVM9 353 aa16.95■□□□□ 0.3
PGAP3-207ENST00000580898 USP2O75604 605 aaPredicted RBP16.95■□□□□ 0.3
PGAP3-207ENST00000580898 BCAMP50895 628 aa16.95■□□□□ 0.3
PGAP3-207ENST00000580898 TRMT2AQ8IZ69 625 aaKnown RBP16.95■□□□□ 0.3
PGAP3-207ENST00000580898 WDR66Q8TBY9 1149 aa16.95■□□□□ 0.3
PGAP3-207ENST00000580898 CLMNQ96JQ2 1002 aa16.95■□□□□ 0.3
PGAP3-207ENST00000580898 GNL3LQ9NVN8 582 aaKnown RBP16.95■□□□□ 0.3
PGAP3-207ENST00000580898 FGFR2P21802 821 aa16.94■□□□□ 0.3
PGAP3-207ENST00000580898 ZDHHC15Q96MV8 337 aa16.94■□□□□ 0.3
PGAP3-207ENST00000580898 NOB1Q9ULX3 412 aaKnown RBP16.94■□□□□ 0.3
PGAP3-207ENST00000580898 HPS5Q9UPZ3 1129 aa16.94■□□□□ 0.3
PGAP3-207ENST00000580898 CSADQ9Y600 493 aa16.94■□□□□ 0.3
PGAP3-207ENST00000580898 AOX1Q06278 1338 aa16.94■□□□□ 0.3
PGAP3-207ENST00000580898 CIAO1O76071 339 aa16.93■□□□□ 0.3
PGAP3-207ENST00000580898 FBXO46Q6PJ61 603 aaPredicted RBP16.93■□□□□ 0.3
PGAP3-207ENST00000580898 CEP126Q9P2H0 1117 aa16.93■□□□□ 0.3
PGAP3-207ENST00000580898 RFX5P48382 616 aaPredicted RBP16.92■□□□□ 0.3
PGAP3-207ENST00000580898 MAP3K9P80192 1104 aa16.92■□□□□ 0.3
PGAP3-207ENST00000580898 FKBP1CQ5VVH2 108 aa16.92■□□□□ 0.3
PGAP3-207ENST00000580898 HHIPL2Q6UWX4 724 aa16.92■□□□□ 0.3
PGAP3-207ENST00000580898 FAM83AQ86UY5 434 aa16.92■□□□□ 0.3
PGAP3-207ENST00000580898 OPTNQ96CV9 577 aa16.92■□□□□ 0.3
PGAP3-207ENST00000580898 TEPSINQ96N21 525 aa16.92■□□□□ 0.3
PGAP3-207ENST00000580898 TMEM39BQ9GZU3 492 aa16.92■□□□□ 0.3
PGAP3-207ENST00000580898 ELP3Q9H9T3 547 aa16.92■□□□□ 0.3
PGAP3-207ENST00000580898 WDHD1O75717 1129 aaPredicted RBP16.91■□□□□ 0.3
PGAP3-207ENST00000580898 IL15P40933 162 aaPredicted RBP16.91■□□□□ 0.3
PGAP3-207ENST00000580898 SOX10P56693 466 aa16.91■□□□□ 0.3
PGAP3-207ENST00000580898 ATP2B3Q16720 1220 aa16.91■□□□□ 0.3
PGAP3-207ENST00000580898 ERO1AQ96HE7 468 aa16.91■□□□□ 0.3
PGAP3-207ENST00000580898 SIL1Q9H173 461 aa16.91■□□□□ 0.3
PGAP3-207ENST00000580898 IGF2BP3O00425 579 aaKnown RBP eCLIP16.9■□□□□ 0.3
PGAP3-207ENST00000580898 GTF2A2P52657 109 aa16.9■□□□□ 0.3
PGAP3-207ENST00000580898 GRIK5Q16478 980 aa16.9■□□□□ 0.3
PGAP3-207ENST00000580898 DCAF15Q66K64 600 aa16.9■□□□□ 0.3
PGAP3-207ENST00000580898 ATG9AQ7Z3C6 839 aa16.9■□□□□ 0.3
PGAP3-207ENST00000580898 ARHGAP45Q92619 1136 aa16.9■□□□□ 0.3
PGAP3-207ENST00000580898 RPAP1Q9BWH6 1393 aaPredicted RBP16.89■□□□□ 0.3
PGAP3-207ENST00000580898 LAMB1P07942 1786 aa16.89■□□□□ 0.3
PGAP3-207ENST00000580898 TESPA1A2RU30 521 aaPredicted RBP16.89■□□□□ 0.29
PGAP3-207ENST00000580898 SEMA3EO15041 775 aa16.89■□□□□ 0.29
PGAP3-207ENST00000580898 IPO8O15397 1037 aaKnown RBP16.89■□□□□ 0.29
PGAP3-207ENST00000580898 GNAI3P08754 354 aa16.89■□□□□ 0.29
PGAP3-207ENST00000580898 VGLL4Q14135 290 aa16.89■□□□□ 0.29
PGAP3-207ENST00000580898 ZGPATQ8N5A5 531 aaKnown RBP16.89■□□□□ 0.29
PGAP3-207ENST00000580898 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.89■□□□□ 0.29
PGAP3-207ENST00000580898 DENND2AQ9ULE3 1009 aa16.89■□□□□ 0.29
PGAP3-207ENST00000580898 LRRFIP2Q9Y608 721 aaKnown RBP16.89■□□□□ 0.29
PGAP3-207ENST00000580898 GJA5P36382 358 aa16.88■□□□□ 0.29
PGAP3-207ENST00000580898 RARSP54136 660 aaKnown RBP16.88■□□□□ 0.29
PGAP3-207ENST00000580898 ARHGEF6Q15052 776 aa16.88■□□□□ 0.29
PGAP3-207ENST00000580898 APOBEC3HQ6NTF7 200 aaKnown RBP16.88■□□□□ 0.29
PGAP3-207ENST00000580898 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.88■□□□□ 0.29
PGAP3-207ENST00000580898 TRIM17Q9Y577 477 aa16.88■□□□□ 0.29
PGAP3-207ENST00000580898 LDHBP07195 334 aaKnown RBP16.87■□□□□ 0.29
PGAP3-207ENST00000580898 CACNB3P54284 484 aa16.87■□□□□ 0.29
PGAP3-207ENST00000580898 CRHR2Q13324 411 aa16.87■□□□□ 0.29
PGAP3-207ENST00000580898 OTUD5Q96G74 571 aa16.87■□□□□ 0.29
PGAP3-207ENST00000580898 WRNIP1Q96S55 665 aa16.87■□□□□ 0.29
PGAP3-207ENST00000580898 R3HDMLQ9H3Y0 253 aa16.87■□□□□ 0.29
PGAP3-207ENST00000580898 COPRSQ9NQ92 184 aa16.87■□□□□ 0.29
PGAP3-207ENST00000580898 OTOFQ9HC10 1997 aa16.86■□□□□ 0.29
PGAP3-207ENST00000580898 CCL15-CCL14A0A0B4J2E2 113 aa16.86■□□□□ 0.29
PGAP3-207ENST00000580898 SPDYE5A6NIY4 337 aa16.86■□□□□ 0.29
PGAP3-207ENST00000580898 SP3Q02447 781 aa16.86■□□□□ 0.29
PGAP3-207ENST00000580898 CCL15Q16663 113 aa16.86■□□□□ 0.29
PGAP3-207ENST00000580898 INTS3Q68E01 1043 aaKnown RBP16.86■□□□□ 0.29
PGAP3-207ENST00000580898 ERO1BQ86YB8 467 aa16.86■□□□□ 0.29
PGAP3-207ENST00000580898 CDAN1Q8IWY9 1227 aa16.86■□□□□ 0.29
PGAP3-207ENST00000580898 ZNF341Q9BYN7 854 aa16.86■□□□□ 0.29
PGAP3-207ENST00000580898 ZFYVE28Q9HCC9 887 aa16.86■□□□□ 0.29
PGAP3-207ENST00000580898 AKAP2Q9Y2D5 859 aa16.86■□□□□ 0.29
PGAP3-207ENST00000580898 SALL1Q9NSC2 1324 aa16.86■□□□□ 0.29
PGAP3-207ENST00000580898 CETPP11597 493 aa16.85■□□□□ 0.29
PGAP3-207ENST00000580898 TAF1CQ15572 869 aaPredicted RBP16.85■□□□□ 0.29
PGAP3-207ENST00000580898 OTOP1Q7RTM1 612 aa16.85■□□□□ 0.29
PGAP3-207ENST00000580898 SLF2Q8IX21 1173 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms