RNA–Protein interactions for RNA: ENST00000580508.1

RBFOX3-204, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-204ENST00000580508 GRIK5Q16478 980 aa27.14■■□□□ 1.94
RBFOX3-204ENST00000580508 CDAN1Q8IWY9 1227 aa27.13■■□□□ 1.93
RBFOX3-204ENST00000580508 TESPA1A2RU30 521 aaPredicted RBP27.12■■□□□ 1.93
RBFOX3-204ENST00000580508 PDE8BO95263 885 aa27.12■■□□□ 1.93
RBFOX3-204ENST00000580508 USP44Q9H0E7 712 aa27.12■■□□□ 1.93
RBFOX3-204ENST00000580508 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.12■■□□□ 1.93
RBFOX3-204ENST00000580508 HDLBPQ00341 1268 aaKnown RBP27.11■■□□□ 1.93
RBFOX3-204ENST00000580508 METTL24Q5JXM2 366 aa27.11■■□□□ 1.93
RBFOX3-204ENST00000580508 SSH1Q8WYL5 1049 aa27.11■■□□□ 1.93
RBFOX3-204ENST00000580508 IQSEC3Q9UPP2 1182 aaPredicted RBP27.11■■□□□ 1.93
RBFOX3-204ENST00000580508 E9PSI1 815 aa27.1■■□□□ 1.93
RBFOX3-204ENST00000580508 TBC1D22AQ8WUA7 517 aa27.1■■□□□ 1.93
RBFOX3-204ENST00000580508 PTPN18Q99952 460 aa27.1■■□□□ 1.93
RBFOX3-204ENST00000580508 HTTP42858 3142 aa27.1■■□□□ 1.93
RBFOX3-204ENST00000580508 CAVIN4Q5BKX8 364 aa27.09■■□□□ 1.93
RBFOX3-204ENST00000580508 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.09■■□□□ 1.93
RBFOX3-204ENST00000580508 VPS37DQ86XT2 251 aa27.09■■□□□ 1.93
RBFOX3-204ENST00000580508 KLHDC4Q8TBB5 520 aa27.09■■□□□ 1.93
RBFOX3-204ENST00000580508 KIF16BQ96L93 1317 aa27.09■■□□□ 1.93
RBFOX3-204ENST00000580508 TCP10L2B9ZVM9 353 aa27.08■■□□□ 1.93
RBFOX3-204ENST00000580508 FGFR2P21802 821 aa27.08■■□□□ 1.93
RBFOX3-204ENST00000580508 MS4A4AQ96JQ5 239 aa27.08■■□□□ 1.93
RBFOX3-204ENST00000580508 MRIQ9BWK5 157 aa27.08■■□□□ 1.93
RBFOX3-204ENST00000580508 TMEM39BQ9GZU3 492 aa27.08■■□□□ 1.93
RBFOX3-204ENST00000580508 ELP3Q9H9T3 547 aa27.08■■□□□ 1.93
RBFOX3-204ENST00000580508 TNNI2P48788 182 aa27.07■■□□□ 1.92
RBFOX3-204ENST00000580508 SLFN5Q08AF3 891 aa27.07■■□□□ 1.92
RBFOX3-204ENST00000580508 CHAF1AQ13111 956 aaPredicted RBP27.07■■□□□ 1.92
RBFOX3-204ENST00000580508 CRHR2Q13324 411 aa27.07■■□□□ 1.92
RBFOX3-204ENST00000580508 OTUD7BQ6GQQ9 843 aa27.07■■□□□ 1.92
RBFOX3-204ENST00000580508 OTOP1Q7RTM1 612 aa27.07■■□□□ 1.92
RBFOX3-204ENST00000580508 OPTNQ96CV9 577 aa27.07■■□□□ 1.92
RBFOX3-204ENST00000580508 MYH13Q9UKX3 1938 aa27.07■■□□□ 1.92
RBFOX3-204ENST00000580508 RFX5P48382 616 aaPredicted RBP27.06■■□□□ 1.92
RBFOX3-204ENST00000580508 BCAMP50895 628 aa27.06■■□□□ 1.92
RBFOX3-204ENST00000580508 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.06■■□□□ 1.92
RBFOX3-204ENST00000580508 TRIM17Q9Y577 477 aa27.06■■□□□ 1.92
RBFOX3-204ENST00000580508 TEKT1Q969V4 418 aa27.05■■□□□ 1.92
RBFOX3-204ENST00000580508 ZDHHC15Q96MV8 337 aa27.05■■□□□ 1.92
RBFOX3-204ENST00000580508 MAP3K9P80192 1104 aa27.04■■□□□ 1.92
RBFOX3-204ENST00000580508 VGLL4Q14135 290 aa27.04■■□□□ 1.92
RBFOX3-204ENST00000580508 PUM3Q15397 648 aaKnown RBP27.04■■□□□ 1.92
RBFOX3-204ENST00000580508 CNKSR2Q8WXI2 1034 aa27.04■■□□□ 1.92
RBFOX3-204ENST00000580508 ERO1AQ96HE7 468 aa27.04■■□□□ 1.92
RBFOX3-204ENST00000580508 SUGT1Q9Y2Z0 365 aa27.04■■□□□ 1.92
RBFOX3-204ENST00000580508 FRAT2O75474 233 aaPredicted RBP27.03■■□□□ 1.92
RBFOX3-204ENST00000580508 ALDH1L2Q3SY69 923 aa27.03■■□□□ 1.92
RBFOX3-204ENST00000580508 RBBP6Q7Z6E9 1792 aaKnown RBP27.02■■□□□ 1.92
RBFOX3-204ENST00000580508 EYA2O00167 538 aa27.02■■□□□ 1.92
RBFOX3-204ENST00000580508 PRPF38BQ5VTL8 546 aaKnown RBP27.02■■□□□ 1.92
RBFOX3-204ENST00000580508 FKBP1CQ5VVH2 108 aa27.02■■□□□ 1.92
RBFOX3-204ENST00000580508 APOBEC3HQ6NTF7 200 aaKnown RBP27.02■■□□□ 1.92
RBFOX3-204ENST00000580508 BRI3BPQ8WY22 251 aa27.02■■□□□ 1.92
RBFOX3-204ENST00000580508 IFIT1P09914 478 aaKnown RBP27.01■■□□□ 1.91
RBFOX3-204ENST00000580508 CACNB3P54284 484 aa27.01■■□□□ 1.91
RBFOX3-204ENST00000580508 CAP1Q01518 475 aa27.01■■□□□ 1.91
RBFOX3-204ENST00000580508 FAM83AQ86UY5 434 aa27.01■■□□□ 1.91
RBFOX3-204ENST00000580508 CD99L2Q8TCZ2 262 aa27.01■■□□□ 1.91
RBFOX3-204ENST00000580508 MAST3O60307 1309 aa27■■□□□ 1.91
RBFOX3-204ENST00000580508 HHIPL2Q6UWX4 724 aa27■■□□□ 1.91
RBFOX3-204ENST00000580508 TRMT2AQ8IZ69 625 aaKnown RBP27■■□□□ 1.91
RBFOX3-204ENST00000580508 PTPN22Q9Y2R2 807 aa27■■□□□ 1.91
RBFOX3-204ENST00000580508 GTF2A2P52657 109 aa26.99■■□□□ 1.91
RBFOX3-204ENST00000580508 SP3Q02447 781 aa26.99■■□□□ 1.91
RBFOX3-204ENST00000580508 ATG9AQ7Z3C6 839 aa26.99■■□□□ 1.91
RBFOX3-204ENST00000580508 CDCA7LQ96GN5 454 aa26.99■■□□□ 1.91
RBFOX3-204ENST00000580508 CSADQ9Y600 493 aa26.99■■□□□ 1.91
RBFOX3-204ENST00000580508 KIAA0100Q14667 2235 aaKnown RBP26.99■■□□□ 1.91
RBFOX3-204ENST00000580508 RPAP1Q9BWH6 1393 aaPredicted RBP26.98■■□□□ 1.91
RBFOX3-204ENST00000580508 SPDYE5A6NIY4 337 aa26.98■■□□□ 1.91
RBFOX3-204ENST00000580508 INTS3Q68E01 1043 aaKnown RBP26.98■■□□□ 1.91
RBFOX3-204ENST00000580508 LPIN2Q92539 896 aa26.98■■□□□ 1.91
RBFOX3-204ENST00000580508 SNCAIPQ9Y6H5 919 aa26.98■■□□□ 1.91
RBFOX3-204ENST00000580508 CCL15-CCL14A0A0B4J2E2 113 aa26.97■■□□□ 1.91
RBFOX3-204ENST00000580508 SLC5A1P13866 664 aa26.97■■□□□ 1.91
RBFOX3-204ENST00000580508 CCL15Q16663 113 aa26.97■■□□□ 1.91
RBFOX3-204ENST00000580508 OTUD5Q96G74 571 aa26.97■■□□□ 1.91
RBFOX3-204ENST00000580508 TMOD2Q9NZR1 351 aa26.97■■□□□ 1.91
RBFOX3-204ENST00000580508 WDR66Q8TBY9 1149 aa26.96■■□□□ 1.91
RBFOX3-204ENST00000580508 EFCC1Q9HA90 598 aa26.96■■□□□ 1.91
RBFOX3-204ENST00000580508 SMC4Q9NTJ3 1288 aa26.96■■□□□ 1.91
RBFOX3-204ENST00000580508 FBXO3Q9UK99 471 aa26.96■■□□□ 1.91
RBFOX3-204ENST00000580508 CENPFP49454 3210 aa26.95■■□□□ 1.91
RBFOX3-204ENST00000580508 FAM43AQ8N2R8 423 aa26.95■■□□□ 1.9
RBFOX3-204ENST00000580508 ARMC5Q96C12 935 aa26.95■■□□□ 1.9
RBFOX3-204ENST00000580508 TAF1CQ15572 869 aaPredicted RBP26.94■■□□□ 1.9
RBFOX3-204ENST00000580508 ERO1BQ86YB8 467 aa26.94■■□□□ 1.9
RBFOX3-204ENST00000580508 HOOK2Q96ED9 719 aa26.94■■□□□ 1.9
RBFOX3-204ENST00000580508 ZFYVE28Q9HCC9 887 aa26.94■■□□□ 1.9
RBFOX3-204ENST00000580508 POTEFA5A3E0 1075 aa26.93■■□□□ 1.9
RBFOX3-204ENST00000580508 CIAO1O76071 339 aa26.93■■□□□ 1.9
RBFOX3-204ENST00000580508 ZKSCAN4Q969J2 545 aaPredicted RBP26.93■■□□□ 1.9
RBFOX3-204ENST00000580508 WRNIP1Q96S55 665 aa26.93■■□□□ 1.9
RBFOX3-204ENST00000580508 ZCCHC17Q9NP64 241 aaKnown RBP26.92■■□□□ 1.9
RBFOX3-204ENST00000580508 CT47B1P0C2W7 299 aaPredicted RBP26.91■■□□□ 1.9
RBFOX3-204ENST00000580508 UBTFL1P0CB47 393 aaPredicted RBP26.91■■□□□ 1.9
RBFOX3-204ENST00000580508 DAGLAQ9Y4D2 1042 aa26.91■■□□□ 1.9
RBFOX3-204ENST00000580508 IRF6O14896 467 aa26.9■■□□□ 1.9
RBFOX3-204ENST00000580508 ZBTB22O15209 634 aa26.9■■□□□ 1.9
RBFOX3-204ENST00000580508 CETPP11597 493 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms