RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 ADGRA2Q96PE1 1338 aa18.35■□□□□ 0.53
CSNK1D-213ENST00000580446 TMEM265A0A087WTH1 108 aa18.35■□□□□ 0.53
CSNK1D-213ENST00000580446 POTEB2H3BUK9 544 aa18.35■□□□□ 0.53
CSNK1D-213ENST00000580446 NEFMP07197 916 aa18.35■□□□□ 0.53
CSNK1D-213ENST00000580446 NECAB2Q7Z6G3 386 aa18.35■□□□□ 0.53
CSNK1D-213ENST00000580446 SLAIN1Q8ND83 568 aa18.35■□□□□ 0.53
CSNK1D-213ENST00000580446 PLEKHF1Q96S99 279 aa18.35■□□□□ 0.53
CSNK1D-213ENST00000580446 GREM2Q9H772 168 aa18.35■□□□□ 0.53
CSNK1D-213ENST00000580446 TDRD3Q9H7E2 651 aaKnown RBP18.35■□□□□ 0.53
CSNK1D-213ENST00000580446 ZNF70Q9UC06 446 aaPredicted RBP18.35■□□□□ 0.53
CSNK1D-213ENST00000580446 MDM2Q00987 491 aaPredicted RBP18.34■□□□□ 0.53
CSNK1D-213ENST00000580446 SNAPC2Q13487 334 aa18.34■□□□□ 0.53
CSNK1D-213ENST00000580446 HDGFL1Q5TGJ6 251 aa18.34■□□□□ 0.53
CSNK1D-213ENST00000580446 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.34■□□□□ 0.53
CSNK1D-213ENST00000580446 CDX2Q99626 313 aaPredicted RBP18.34■□□□□ 0.53
CSNK1D-213ENST00000580446 PDHXO00330 501 aa18.33■□□□□ 0.52
CSNK1D-213ENST00000580446 MMP14P50281 582 aa18.33■□□□□ 0.52
CSNK1D-213ENST00000580446 TRIM28Q13263 835 aaKnown RBP18.33■□□□□ 0.52
CSNK1D-213ENST00000580446 RIC3Q7Z5B4 369 aa18.33■□□□□ 0.52
CSNK1D-213ENST00000580446 CDC5LQ99459 802 aaKnown RBP18.33■□□□□ 0.52
CSNK1D-213ENST00000580446 CD209Q9NNX6 404 aa18.33■□□□□ 0.52
CSNK1D-213ENST00000580446 BSDC1Q9NW68 430 aaPredicted RBP18.33■□□□□ 0.52
CSNK1D-213ENST00000580446 SPEF2Q9C093 1822 aa18.32■□□□□ 0.52
CSNK1D-213ENST00000580446 PCCAP05165 728 aaPredicted RBP18.31■□□□□ 0.52
CSNK1D-213ENST00000580446 CYP2C8P10632 490 aa18.31■□□□□ 0.52
CSNK1D-213ENST00000580446 FLT3LGP49771 235 aa18.31■□□□□ 0.52
CSNK1D-213ENST00000580446 CACNB3P54284 484 aa18.31■□□□□ 0.52
CSNK1D-213ENST00000580446 FCGRTP55899 365 aa18.31■□□□□ 0.52
CSNK1D-213ENST00000580446 CTSWP56202 376 aa18.31■□□□□ 0.52
CSNK1D-213ENST00000580446 SPDYE2Q495Y8 402 aa18.31■□□□□ 0.52
CSNK1D-213ENST00000580446 MYLIPQ8WY64 445 aa18.31■□□□□ 0.52
CSNK1D-213ENST00000580446 WRNIP1Q96S55 665 aa18.31■□□□□ 0.52
CSNK1D-213ENST00000580446 CRISPLD2Q9H0B8 497 aa18.31■□□□□ 0.52
CSNK1D-213ENST00000580446 PAK6Q9NQU5 681 aaPredicted RBP18.31■□□□□ 0.52
CSNK1D-213ENST00000580446 KCNJ4P48050 445 aa18.3■□□□□ 0.52
CSNK1D-213ENST00000580446 ERO1BQ86YB8 467 aa18.3■□□□□ 0.52
CSNK1D-213ENST00000580446 ZCCHC17Q9NP64 241 aaKnown RBP18.3■□□□□ 0.52
CSNK1D-213ENST00000580446 LEMD3Q9Y2U8 911 aa18.3■□□□□ 0.52
CSNK1D-213ENST00000580446 LAS1LQ9Y4W2 734 aaKnown RBP18.3■□□□□ 0.52
CSNK1D-213ENST00000580446 LAMA2P24043 3122 aaKnown RBP18.3■□□□□ 0.52
CSNK1D-213ENST00000580446 ZNF697Q5TEC3 545 aa18.29■□□□□ 0.52
CSNK1D-213ENST00000580446 HELBQ8NG08 1087 aaPredicted RBP18.29■□□□□ 0.52
CSNK1D-213ENST00000580446 TIMELESSQ9UNS1 1208 aa18.29■□□□□ 0.52
CSNK1D-213ENST00000580446 TNFRSF10AO00220 468 aa18.28■□□□□ 0.52
CSNK1D-213ENST00000580446 PPIL2Q13356 520 aa18.28■□□□□ 0.52
CSNK1D-213ENST00000580446 TTLL11Q8NHH1 800 aa18.28■□□□□ 0.52
CSNK1D-213ENST00000580446 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.28■□□□□ 0.522e-11■■■■■ 41.3
CSNK1D-213ENST00000580446 PHAXQ9H814 394 aaKnown RBP18.28■□□□□ 0.52
CSNK1D-213ENST00000580446 MAPK8IP3Q9UPT6 1336 aa18.27■□□□□ 0.52
CSNK1D-213ENST00000580446 HSP90B1P14625 803 aaKnown RBP18.27■□□□□ 0.52
CSNK1D-213ENST00000580446 HOXD11P31277 338 aaPredicted RBP18.27■□□□□ 0.52
CSNK1D-213ENST00000580446 TNFAIP1Q13829 316 aa18.27■□□□□ 0.52
CSNK1D-213ENST00000580446 FAM109BQ6ICB4 259 aaPredicted RBP18.27■□□□□ 0.52
CSNK1D-213ENST00000580446 ANKRD23Q86SG2 305 aa18.27■□□□□ 0.52
CSNK1D-213ENST00000580446 CWC25Q9NXE8 425 aaPredicted RBP18.27■□□□□ 0.52
CSNK1D-213ENST00000580446 DBF4Q9UBU7 674 aaPredicted RBP18.27■□□□□ 0.52
CSNK1D-213ENST00000580446 MUC3AQ02505 3323 aa18.27■□□□□ 0.51
CSNK1D-213ENST00000580446 ECM29Q5VYK3 1845 aa18.26■□□□□ 0.51
CSNK1D-213ENST00000580446 TAF5LO75529 589 aa18.26■□□□□ 0.51
CSNK1D-213ENST00000580446 RIPK4P57078 832 aa18.26■□□□□ 0.51
CSNK1D-213ENST00000580446 GOLGA2Q08379 1002 aa18.26■□□□□ 0.51
CSNK1D-213ENST00000580446 NBPF3Q9H094 633 aa18.26■□□□□ 0.51
CSNK1D-213ENST00000580446 C11orf49Q9H6J7 331 aa18.26■□□□□ 0.51
CSNK1D-213ENST00000580446 BCRP11274 1271 aa18.25■□□□□ 0.51
CSNK1D-213ENST00000580446 INPP5BP32019 993 aa18.25■□□□□ 0.51
CSNK1D-213ENST00000580446 TRIM32Q13049 653 aa18.25■□□□□ 0.51
CSNK1D-213ENST00000580446 MOGSQ13724 837 aa18.25■□□□□ 0.51
CSNK1D-213ENST00000580446 SYMPKQ92797 1274 aaKnown RBP18.25■□□□□ 0.51
CSNK1D-213ENST00000580446 USP38Q8NB14 1042 aa18.24■□□□□ 0.51
CSNK1D-213ENST00000580446 CCDC191Q8NCU4 936 aa18.24■□□□□ 0.51
CSNK1D-213ENST00000580446 HYPKQ9NX55 129 aa18.24■□□□□ 0.51
CSNK1D-213ENST00000580446 IGHMBP2P38935 993 aaKnown RBP18.23■□□□□ 0.51
CSNK1D-213ENST00000580446 MAP3K12Q12852 859 aa18.23■□□□□ 0.51
CSNK1D-213ENST00000580446 MIGA2Q7L4E1 593 aa18.23■□□□□ 0.51
CSNK1D-213ENST00000580446 DZIP1LQ8IYY4 767 aaKnown RBP18.23■□□□□ 0.51
CSNK1D-213ENST00000580446 SEMA6BQ9H3T3 888 aa18.23■□□□□ 0.51
CSNK1D-213ENST00000580446 TTF2Q9UNY4 1162 aaKnown RBP18.23■□□□□ 0.51
CSNK1D-213ENST00000580446 PFASO15067 1338 aa18.23■□□□□ 0.51
CSNK1D-213ENST00000580446 FAM205AQ6ZU69 1335 aa18.23■□□□□ 0.51
CSNK1D-213ENST00000580446 TNPO2O14787 897 aaKnown RBP18.22■□□□□ 0.51
CSNK1D-213ENST00000580446 CHRNDQ07001 517 aa18.22■□□□□ 0.51
CSNK1D-213ENST00000580446 PARK7Q99497 189 aaKnown RBP18.22■□□□□ 0.51
CSNK1D-213ENST00000580446 ANKRD2Q9GZV1 360 aa18.22■□□□□ 0.51
CSNK1D-213ENST00000580446 COL2A1P02458 1487 aaPredicted RBP18.21■□□□□ 0.51
CSNK1D-213ENST00000580446 FOSL2P15408 326 aa18.21■□□□□ 0.51
CSNK1D-213ENST00000580446 GRIK5Q16478 980 aa18.21■□□□□ 0.51
CSNK1D-213ENST00000580446 GPAT2Q6NUI2 795 aa18.21■□□□□ 0.51
CSNK1D-213ENST00000580446 PXYLP1Q8TE99 480 aa18.21■□□□□ 0.51
CSNK1D-213ENST00000580446 TTYH1Q9H313 450 aaPredicted RBP18.21■□□□□ 0.51
CSNK1D-213ENST00000580446 LRRC26Q2I0M4 334 aa18.2■□□□□ 0.5
CSNK1D-213ENST00000580446 TJAP1Q5JTD0 557 aa18.2■□□□□ 0.5
CSNK1D-213ENST00000580446 DDX60LQ5H9U9 1706 aaKnown RBP18.2■□□□□ 0.5
CSNK1D-213ENST00000580446 IL1R1P14778 569 aa18.19■□□□□ 0.5
CSNK1D-213ENST00000580446 ITGA6P23229 1130 aa18.19■□□□□ 0.5
CSNK1D-213ENST00000580446 TNNI2P48788 182 aa18.19■□□□□ 0.5
CSNK1D-213ENST00000580446 PPATQ06203 517 aa18.19■□□□□ 0.5
CSNK1D-213ENST00000580446 NEUROD2Q15784 382 aa18.19■□□□□ 0.5
CSNK1D-213ENST00000580446 DUSP27Q5VZP5 1158 aa18.19■□□□□ 0.5
CSNK1D-213ENST00000580446 MPHOSPH8Q99549 860 aa18.19■□□□□ 0.5
CSNK1D-213ENST00000580446 BABAM1Q9NWV8 329 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms