RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 PRMT6Q96LA8 375 aaPredicted RBP20.17■□□□□ 0.82
IFT20-210ENST00000580357 ABT1Q9ULW3 272 aaKnown RBP20.17■□□□□ 0.82
IFT20-210ENST00000580357 EXOC6BQ9Y2D4 811 aa20.17■□□□□ 0.82
IFT20-210ENST00000580357 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.17■□□□□ 0.82
IFT20-210ENST00000580357 ASTN2O75129 1339 aaPredicted RBP20.17■□□□□ 0.82
IFT20-210ENST00000580357 ARID4AP29374 1257 aaPredicted RBP20.16■□□□□ 0.82
IFT20-210ENST00000580357 FMR1Q06787 632 aaKnown RBP eCLIP20.16■□□□□ 0.82
IFT20-210ENST00000580357 SLF2Q8IX21 1173 aa20.16■□□□□ 0.82
IFT20-210ENST00000580357 HHIPL1Q96JK4 782 aa20.16■□□□□ 0.82
IFT20-210ENST00000580357 ZNF512BQ96KM6 892 aaPredicted RBP20.16■□□□□ 0.82
IFT20-210ENST00000580357 ZNF408Q9H9D4 720 aa20.16■□□□□ 0.82
IFT20-210ENST00000580357 PPP2R3BQ9Y5P8 575 aa20.16■□□□□ 0.82
IFT20-210ENST00000580357 TLL2Q9Y6L7 1015 aa20.16■□□□□ 0.82
IFT20-210ENST00000580357 RASSF10A6NK89 507 aa20.15■□□□□ 0.82
IFT20-210ENST00000580357 ADM5C9JUS6 153 aa20.15■□□□□ 0.82
IFT20-210ENST00000580357 IGSF3O75054 1194 aa20.15■□□□□ 0.82
IFT20-210ENST00000580357 NF2P35240 595 aa20.15■□□□□ 0.82
IFT20-210ENST00000580357 RASGRF1Q13972 1273 aa20.15■□□□□ 0.82
IFT20-210ENST00000580357 TTC39AQ5SRH9 613 aa20.15■□□□□ 0.82
IFT20-210ENST00000580357 CLASRPQ8N2M8 674 aaKnown RBP20.15■□□□□ 0.82
IFT20-210ENST00000580357 RHPN1Q8TCX5 695 aa20.15■□□□□ 0.82
IFT20-210ENST00000580357 ZDHHC15Q96MV8 337 aa20.15■□□□□ 0.82
IFT20-210ENST00000580357 POLR2AP24928 1970 aaKnown RBP20.15■□□□□ 0.82
IFT20-210ENST00000580357 FKBP1BP68106 108 aa20.14■□□□□ 0.81
IFT20-210ENST00000580357 TNFAIP1Q13829 316 aa20.14■□□□□ 0.81
IFT20-210ENST00000580357 SPATA5Q8NB90 893 aa20.14■□□□□ 0.81
IFT20-210ENST00000580357 CDCA5Q96FF9 252 aa20.14■□□□□ 0.81
IFT20-210ENST00000580357 CNTNAP1P78357 1384 aa20.13■□□□□ 0.81
IFT20-210ENST00000580357 ECE1P42892 770 aa20.13■□□□□ 0.81
IFT20-210ENST00000580357 SAPCD2Q86UD0 394 aa20.13■□□□□ 0.81
IFT20-210ENST00000580357 EAF2Q96CJ1 260 aaPredicted RBP20.13■□□□□ 0.81
IFT20-210ENST00000580357 DBNDD2Q9BQY9 259 aa20.13■□□□□ 0.81
IFT20-210ENST00000580357 GBA2Q9HCG7 927 aaPredicted RBP20.13■□□□□ 0.81
IFT20-210ENST00000580357 HMG20BQ9P0W2 317 aa20.13■□□□□ 0.81
IFT20-210ENST00000580357 ZNF70Q9UC06 446 aaPredicted RBP20.13■□□□□ 0.81
IFT20-210ENST00000580357 TRPM7Q96QT4 1865 aa20.13■□□□□ 0.81
IFT20-210ENST00000580357 TNNI2P48788 182 aa20.12■□□□□ 0.81
IFT20-210ENST00000580357 GRIK5Q16478 980 aa20.12■□□□□ 0.81
IFT20-210ENST00000580357 SPDYE2Q495Y8 402 aa20.12■□□□□ 0.81
IFT20-210ENST00000580357 ERICH6Q7L0X2 663 aa20.12■□□□□ 0.81
IFT20-210ENST00000580357 CCDC8Q9H0W5 538 aaPredicted RBP20.12■□□□□ 0.81
IFT20-210ENST00000580357 DEFB129Q9H1M3 183 aa20.12■□□□□ 0.81
IFT20-210ENST00000580357 TDRD3Q9H7E2 651 aaKnown RBP20.12■□□□□ 0.81
IFT20-210ENST00000580357 ABCF2Q9UG63 623 aa20.12■□□□□ 0.81
IFT20-210ENST00000580357 MKRN1Q9UHC7 482 aaKnown RBP20.12■□□□□ 0.81
IFT20-210ENST00000580357 PRDX5P30044 214 aa20.11■□□□□ 0.81
IFT20-210ENST00000580357 SUPT20HL1Q3ZLR7 823 aa20.11■□□□□ 0.81
IFT20-210ENST00000580357 AACSQ86V21 672 aa20.11■□□□□ 0.81
IFT20-210ENST00000580357 FAM163AQ96GL9 167 aaPredicted RBP20.11■□□□□ 0.81
IFT20-210ENST00000580357 TMOD2Q9NZR1 351 aa20.11■□□□□ 0.81
IFT20-210ENST00000580357 PCDHAC2Q9Y5I4 1007 aa20.11■□□□□ 0.81
IFT20-210ENST00000580357 COL1A1P02452 1464 aaPredicted RBP20.11■□□□□ 0.81
IFT20-210ENST00000580357 ARAP2Q8WZ64 1704 aa20.1■□□□□ 0.81
IFT20-210ENST00000580357 LDHCP07864 332 aa20.1■□□□□ 0.81
IFT20-210ENST00000580357 GSTO1P78417 241 aa20.1■□□□□ 0.81
IFT20-210ENST00000580357 FKBP1CQ5VVH2 108 aa20.1■□□□□ 0.81
IFT20-210ENST00000580357 DCTPP1Q9H773 170 aa20.1■□□□□ 0.81
IFT20-210ENST00000580357 VEZTQ9HBM0 779 aa20.1■□□□□ 0.81
IFT20-210ENST00000580357 DBNLQ9UJU6 430 aaKnown RBP20.1■□□□□ 0.81
IFT20-210ENST00000580357 CLRN2A0PK11 232 aa20.09■□□□□ 0.81
IFT20-210ENST00000580357 IFIT2P09913 472 aaKnown RBP20.09■□□□□ 0.81
IFT20-210ENST00000580357 MCAMP43121 646 aa20.09■□□□□ 0.81
IFT20-210ENST00000580357 APOBEC3HQ6NTF7 200 aaKnown RBP20.09■□□□□ 0.81
IFT20-210ENST00000580357 DLK2Q6UY11 383 aa20.09■□□□□ 0.81
IFT20-210ENST00000580357 DZIP1Q86YF9 867 aaKnown RBP20.09■□□□□ 0.81
IFT20-210ENST00000580357 CRBNQ96SW2 442 aa20.09■□□□□ 0.81
IFT20-210ENST00000580357 LRRCC1Q9C099 1032 aa20.09■□□□□ 0.81
IFT20-210ENST00000580357 IL1RAPL2Q9NP60 686 aa20.09■□□□□ 0.81
IFT20-210ENST00000580357 VEGFBP49765 207 aa20.08■□□□□ 0.81
IFT20-210ENST00000580357 HUNKP57058 714 aa20.08■□□□□ 0.81
IFT20-210ENST00000580357 LRP2BPQ9P2M1 347 aa20.08■□□□□ 0.81
IFT20-210ENST00000580357 MYH13Q9UKX3 1938 aa20.08■□□□□ 0.8
IFT20-210ENST00000580357 WDR33Q9C0J8 1336 aaKnown RBP20.07■□□□□ 0.8
IFT20-210ENST00000580357 APBB1O00213 710 aa20.07■□□□□ 0.8
IFT20-210ENST00000580357 RASA3Q14644 834 aa20.07■□□□□ 0.8
IFT20-210ENST00000580357 ARMC9Q7Z3E5 817 aa20.07■□□□□ 0.8
IFT20-210ENST00000580357 CCDC102AQ96A19 550 aa20.07■□□□□ 0.8
IFT20-210ENST00000580357 SCAF8Q9UPN6 1271 aaKnown RBP20.07■□□□□ 0.8
IFT20-210ENST00000580357 SUPT16HQ9Y5B9 1047 aaKnown RBP20.07■□□□□ 0.8
IFT20-210ENST00000580357 PPP1R12BO60237 982 aaPredicted RBP20.06■□□□□ 0.8
IFT20-210ENST00000580357 MAP4K4O95819 1239 aaPredicted RBP20.06■□□□□ 0.8
IFT20-210ENST00000580357 PRAMEF18Q5VWM3 479 aa20.06■□□□□ 0.8
IFT20-210ENST00000580357 TMED8Q6PL24 325 aaPredicted RBP20.06■□□□□ 0.8
IFT20-210ENST00000580357 PAXIP1Q6ZW49 1069 aaPredicted RBP20.06■□□□□ 0.8
IFT20-210ENST00000580357 FAM83AQ86UY5 434 aa20.06■□□□□ 0.8
IFT20-210ENST00000580357 HOOK2Q96ED9 719 aa20.06■□□□□ 0.8
IFT20-210ENST00000580357 CAPNS2Q96L46 248 aa20.06■□□□□ 0.8
IFT20-210ENST00000580357 DAGLAQ9Y4D2 1042 aa20.06■□□□□ 0.8
IFT20-210ENST00000580357 PCDHB15Q9Y5E8 787 aa20.06■□□□□ 0.8
IFT20-210ENST00000580357 UNCXA6NJT0 531 aa20.05■□□□□ 0.8
IFT20-210ENST00000580357 TCP10L2B9ZVM9 353 aa20.05■□□□□ 0.8
IFT20-210ENST00000580357 MAP2K2P36507 400 aa20.05■□□□□ 0.8
IFT20-210ENST00000580357 TTLL12Q14166 644 aaPredicted RBP20.05■□□□□ 0.8
IFT20-210ENST00000580357 RGMBQ6NW40 437 aa20.05■□□□□ 0.8
IFT20-210ENST00000580357 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.05■□□□□ 0.8
IFT20-210ENST00000580357 RAI14Q9P0K7 980 aa20.05■□□□□ 0.8
IFT20-210ENST00000580357 MECOMQ03112 1051 aa20.04■□□□□ 0.8
IFT20-210ENST00000580357 TTF1Q15361 905 aaPredicted RBP20.04■□□□□ 0.8
IFT20-210ENST00000580357 DIXDC1Q155Q3 683 aa20.04■□□□□ 0.8
IFT20-210ENST00000580357 PI16Q6UXB8 463 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms