RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 TDRD3Q9H7E2 651 aaKnown RBP24.61■■□□□ 1.53
LIMD2-209ENST00000580222 GTF2A2P52657 109 aa24.6■■□□□ 1.53
LIMD2-209ENST00000580222 FKBP1AP62942 108 aaKnown RBP24.6■■□□□ 1.53
LIMD2-209ENST00000580222 ARHGEF6Q15052 776 aa24.6■■□□□ 1.53
LIMD2-209ENST00000580222 SPDYE2Q495Y8 402 aa24.6■■□□□ 1.53
LIMD2-209ENST00000580222 SLC17A8Q8NDX2 589 aa24.6■■□□□ 1.53
LIMD2-209ENST00000580222 DPF3Q92784 378 aa24.6■■□□□ 1.53
LIMD2-209ENST00000580222 TMEM39BQ9GZU3 492 aa24.6■■□□□ 1.53
LIMD2-209ENST00000580222 ZSWIM8A7E2V4 1837 aa24.59■■□□□ 1.53
LIMD2-209ENST00000580222 MAP3K9P80192 1104 aa24.59■■□□□ 1.53
LIMD2-209ENST00000580222 LACTBP83111 547 aaPredicted RBP24.59■■□□□ 1.53
LIMD2-209ENST00000580222 NEXNQ0ZGT2 675 aa24.59■■□□□ 1.53
LIMD2-209ENST00000580222 GCKRQ14397 625 aa24.59■■□□□ 1.53
LIMD2-209ENST00000580222 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.59■■□□□ 1.53
LIMD2-209ENST00000580222 YTHDC1Q96MU7 727 aaKnown RBP24.59■■□□□ 1.53
LIMD2-209ENST00000580222 TLR2O60603 784 aa24.58■■□□□ 1.53
LIMD2-209ENST00000580222 UBE2Q1Q7Z7E8 422 aa24.58■■□□□ 1.53
LIMD2-209ENST00000580222 OTOFQ9HC10 1997 aa24.58■■□□□ 1.52
LIMD2-209ENST00000580222 ZBED9Q6R2W3 1325 aa24.58■■□□□ 1.52
LIMD2-209ENST00000580222 TCP10L2B9ZVM9 353 aa24.57■■□□□ 1.52
LIMD2-209ENST00000580222 BTBD19C9JJ37 291 aa24.57■■□□□ 1.52
LIMD2-209ENST00000580222 ZNF804AQ7Z570 1209 aa24.56■■□□□ 1.52
LIMD2-209ENST00000580222 GRIK5Q16478 980 aa24.55■■□□□ 1.52
LIMD2-209ENST00000580222 SNCAIPQ9Y6H5 919 aa24.55■■□□□ 1.52
LIMD2-209ENST00000580222 CUL9Q8IWT3 2517 aa24.54■■□□□ 1.52
LIMD2-209ENST00000580222 SOX1O00570 391 aaPredicted RBP24.54■■□□□ 1.52
LIMD2-209ENST00000580222 DZIP1LQ8IYY4 767 aaKnown RBP24.54■■□□□ 1.52
LIMD2-209ENST00000580222 MYH16Q9H6N6 1097 aa24.54■■□□□ 1.52
LIMD2-209ENST00000580222 MYH3P11055 1940 aa24.53■■□□□ 1.52
LIMD2-209ENST00000580222 ANKRD18BA2A2Z9 1011 aa24.53■■□□□ 1.52
LIMD2-209ENST00000580222 SPDYE5A6NIY4 337 aa24.53■■□□□ 1.52
LIMD2-209ENST00000580222 FOXO4P98177 505 aa24.53■■□□□ 1.52
LIMD2-209ENST00000580222 TNFAIP1Q13829 316 aa24.53■■□□□ 1.52
LIMD2-209ENST00000580222 TSR2Q969E8 191 aaKnown RBP24.53■■□□□ 1.52
LIMD2-209ENST00000580222 TRIM47Q96LD4 638 aa24.53■■□□□ 1.52
LIMD2-209ENST00000580222 TTF2Q9UNY4 1162 aaKnown RBP24.53■■□□□ 1.52
LIMD2-209ENST00000580222 FAM205AQ6ZU69 1335 aa24.53■■□□□ 1.52
LIMD2-209ENST00000580222 ECM29Q5VYK3 1845 aa24.52■■□□□ 1.52
LIMD2-209ENST00000580222 C17orf99Q6UX52 265 aa24.52■■□□□ 1.52
LIMD2-209ENST00000580222 ZKSCAN4Q969J2 545 aaPredicted RBP24.52■■□□□ 1.52
LIMD2-209ENST00000580222 SPINK5Q9NQ38 1064 aaPredicted RBP24.52■■□□□ 1.52
LIMD2-209ENST00000580222 SERPINA10Q9UK55 444 aa24.52■■□□□ 1.52
LIMD2-209ENST00000580222 CSADQ9Y600 493 aa24.52■■□□□ 1.52
LIMD2-209ENST00000580222 FANCIQ9NVI1 1328 aa24.52■■□□□ 1.52
LIMD2-209ENST00000580222 E9PSI1 815 aa24.51■■□□□ 1.51
LIMD2-209ENST00000580222 IRF6O14896 467 aa24.51■■□□□ 1.51
LIMD2-209ENST00000580222 PLIN1O60240 522 aa24.51■■□□□ 1.51
LIMD2-209ENST00000580222 CACNB3P54284 484 aa24.51■■□□□ 1.51
LIMD2-209ENST00000580222 KIF22Q14807 665 aa24.51■■□□□ 1.51
LIMD2-209ENST00000580222 MFSD14BQ5SR56 506 aa24.51■■□□□ 1.51
LIMD2-209ENST00000580222 ZNF594Q96JF6 807 aaPredicted RBP24.51■■□□□ 1.51
LIMD2-209ENST00000580222 CPA4Q9UI42 421 aa24.51■■□□□ 1.51
LIMD2-209ENST00000580222 SLC4A2P04920 1241 aa24.5■■□□□ 1.51
LIMD2-209ENST00000580222 CETPP11597 493 aa24.5■■□□□ 1.51
LIMD2-209ENST00000580222 TDRD7Q8NHU6 1098 aaKnown RBP24.5■■□□□ 1.51
LIMD2-209ENST00000580222 SRRDQ9UH36 339 aa24.5■■□□□ 1.51
LIMD2-209ENST00000580222 ZBTB7BO15156 539 aaPredicted RBP24.49■■□□□ 1.51
LIMD2-209ENST00000580222 CCL5P13501 91 aa24.49■■□□□ 1.51
LIMD2-209ENST00000580222 OSBPP22059 807 aa24.49■■□□□ 1.51
LIMD2-209ENST00000580222 PSMC4P43686 418 aa24.49■■□□□ 1.51
LIMD2-209ENST00000580222 CRKP46108 304 aa24.49■■□□□ 1.51
LIMD2-209ENST00000580222 GJA8P48165 433 aa24.49■■□□□ 1.51
LIMD2-209ENST00000580222 EPHA10Q5JZY3 1008 aa24.49■■□□□ 1.51
LIMD2-209ENST00000580222 CDCA7LQ96GN5 454 aa24.49■■□□□ 1.51
LIMD2-209ENST00000580222 LRCH3Q96II8 777 aa24.49■■□□□ 1.51
LIMD2-209ENST00000580222 GNRH1P01148 92 aa24.48■■□□□ 1.51
LIMD2-209ENST00000580222 GYG1P46976 350 aa24.48■■□□□ 1.51
LIMD2-209ENST00000580222 PRMT2P55345 433 aa24.48■■□□□ 1.51
LIMD2-209ENST00000580222 SLFN5Q08AF3 891 aa24.48■■□□□ 1.51
LIMD2-209ENST00000580222 IFIT5Q13325 482 aaKnown RBP24.48■■□□□ 1.51
LIMD2-209ENST00000580222 ERO1BQ86YB8 467 aa24.48■■□□□ 1.51
LIMD2-209ENST00000580222 STK31Q9BXU1 1019 aa24.48■■□□□ 1.51
LIMD2-209ENST00000580222 GJB1P08034 283 aa24.47■■□□□ 1.51
LIMD2-209ENST00000580222 GRK4P32298 578 aa24.47■■□□□ 1.51
LIMD2-209ENST00000580222 ZCCHC17Q9NP64 241 aaKnown RBP24.47■■□□□ 1.51
LIMD2-209ENST00000580222 RIPOR2Q9Y4F9 1068 aa24.47■■□□□ 1.51
LIMD2-209ENST00000580222 SNAPC2Q13487 334 aa24.46■■□□□ 1.51
LIMD2-209ENST00000580222 LINS1Q8NG48 757 aa24.46■■□□□ 1.51
LIMD2-209ENST00000580222 FAM84BQ96KN1 310 aaPredicted RBP24.46■■□□□ 1.51
LIMD2-209ENST00000580222 WRNIP1Q96S55 665 aa24.46■■□□□ 1.51
LIMD2-209ENST00000580222 CHMP4AQ9BY43 222 aa24.46■■□□□ 1.51
LIMD2-209ENST00000580222 CHMP3Q9Y3E7 222 aa24.46■■□□□ 1.51
LIMD2-209ENST00000580222 ADGRA2Q96PE1 1338 aa24.45■■□□□ 1.5
LIMD2-209ENST00000580222 FLIIQ13045 1269 aa24.45■■□□□ 1.5
LIMD2-209ENST00000580222 DNAAF4Q8WXU2 420 aa24.45■■□□□ 1.5
LIMD2-209ENST00000580222 RNF208Q9H0X6 261 aa24.45■■□□□ 1.5
LIMD2-209ENST00000580222 WDHD1O75717 1129 aaPredicted RBP24.44■■□□□ 1.5
LIMD2-209ENST00000580222 PPIL2Q13356 520 aa24.44■■□□□ 1.5
LIMD2-209ENST00000580222 LMBR1LQ6UX01 489 aa24.44■■□□□ 1.5
LIMD2-209ENST00000580222 HTATIP2Q9BUP3 242 aa24.44■■□□□ 1.5
LIMD2-209ENST00000580222 FMNL1O95466 1100 aaPredicted RBP24.43■■□□□ 1.5
LIMD2-209ENST00000580222 TNNI2P48788 182 aa24.43■■□□□ 1.5
LIMD2-209ENST00000580222 MOGSQ13724 837 aa24.43■■□□□ 1.5
LIMD2-209ENST00000580222 LDHAL6AQ6ZMR3 332 aa24.43■■□□□ 1.5
LIMD2-209ENST00000580222 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.43■■□□□ 1.5
LIMD2-209ENST00000580222 NKX2-3Q8TAU0 364 aa24.43■■□□□ 1.5
LIMD2-209ENST00000580222 RAET1EQ8TD07 263 aa24.43■■□□□ 1.5
LIMD2-209ENST00000580222 HIBADHP31937 336 aaKnown RBP24.42■■□□□ 1.5
LIMD2-209ENST00000580222 EXOSC9Q06265 439 aaKnown RBP24.42■■□□□ 1.5
LIMD2-209ENST00000580222 TWISTNBQ3B726 338 aaPredicted RBP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms