RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 AGGF1Q8N302 714 aaeCLIP8.22□□□□□ -1.09
COPS3-216ENST00000579716 GALNT11Q8NCW6 608 aa8.22□□□□□ -1.09
COPS3-216ENST00000579716 GOLGA6AQ9NYA3 693 aa8.22□□□□□ -1.09
COPS3-216ENST00000579716 TPX2Q9ULW0 747 aaKnown RBP8.22□□□□□ -1.09
COPS3-216ENST00000579716 RPGRIP1LQ68CZ1 1315 aa8.22□□□□□ -1.09
COPS3-216ENST00000579716 XYLBO75191 536 aa8.21□□□□□ -1.1
COPS3-216ENST00000579716 EIF2AK2P19525 551 aaKnown RBP8.21□□□□□ -1.1
COPS3-216ENST00000579716 POU5F1Q01860 360 aaKnown RBP8.21□□□□□ -1.1
COPS3-216ENST00000579716 COX20Q5RI15 118 aa8.21□□□□□ -1.1
COPS3-216ENST00000579716 B4GALNT3Q6L9W6 998 aa8.21□□□□□ -1.1
COPS3-216ENST00000579716 CREBRFQ8IUR6 639 aa8.21□□□□□ -1.1
COPS3-216ENST00000579716 IL22RA1Q8N6P7 574 aa8.21□□□□□ -1.1
COPS3-216ENST00000579716 TRIM33Q9UPN9 1127 aa8.21□□□□□ -1.1
COPS3-216ENST00000579716 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.2□□□□□ -1.1
COPS3-216ENST00000579716 ICE2Q659A1 982 aa8.2□□□□□ -1.1
COPS3-216ENST00000579716 GDF6Q6KF10 455 aaPredicted RBP8.2□□□□□ -1.1
COPS3-216ENST00000579716 SLC51AQ86UW1 340 aa8.2□□□□□ -1.1
COPS3-216ENST00000579716 RPS6KC1Q96S38 1066 aa8.2□□□□□ -1.1
COPS3-216ENST00000579716 MRPL18Q9H0U6 180 aaKnown RBP8.2□□□□□ -1.1
COPS3-216ENST00000579716 FOXO3O43524 673 aa8.19□□□□□ -1.1
COPS3-216ENST00000579716 ERCC5P28715 1186 aaPredicted RBP8.19□□□□□ -1.1
COPS3-216ENST00000579716 COL13A1Q5TAT6 717 aaPredicted RBP8.19□□□□□ -1.1
COPS3-216ENST00000579716 PCGF5Q86SE9 256 aa8.19□□□□□ -1.1
COPS3-216ENST00000579716 TREML1Q86YW5 311 aa8.19□□□□□ -1.1
COPS3-216ENST00000579716 RGL4Q8IZJ4 473 aa8.19□□□□□ -1.1
COPS3-216ENST00000579716 ARMC10Q8N2F6 343 aa8.19□□□□□ -1.1
COPS3-216ENST00000579716 NSUN5Q96P11 429 aaKnown RBP8.19□□□□□ -1.1
COPS3-216ENST00000579716 FMNL2Q96PY5 1086 aa8.19□□□□□ -1.1
COPS3-216ENST00000579716 NAP1L4Q99733 375 aaKnown RBP8.19□□□□□ -1.1
COPS3-216ENST00000579716 PCMTD2Q9NV79 361 aa8.19□□□□□ -1.1
COPS3-216ENST00000579716 KCNK4Q9NYG8 393 aa8.19□□□□□ -1.1
COPS3-216ENST00000579716 CFAP69A5D8W1 941 aa8.18□□□□□ -1.1
COPS3-216ENST00000579716 WISP1O95388 367 aa8.18□□□□□ -1.1
COPS3-216ENST00000579716 RFX1P22670 979 aa8.18□□□□□ -1.1
COPS3-216ENST00000579716 IRX3P78415 501 aaPredicted RBP8.18□□□□□ -1.1
COPS3-216ENST00000579716 HSP90AA2PQ14568 343 aaPredicted RBP8.18□□□□□ -1.1
COPS3-216ENST00000579716 TRIP4Q15650 581 aaPredicted RBP8.18□□□□□ -1.1
COPS3-216ENST00000579716 CC2D1BQ5T0F9 858 aaKnown RBP8.18□□□□□ -1.1
COPS3-216ENST00000579716 RNF187Q5TA31 235 aaPredicted RBP8.18□□□□□ -1.1
COPS3-216ENST00000579716 DDX46Q7L014 1031 aaKnown RBP8.18□□□□□ -1.1
COPS3-216ENST00000579716 NPAS4Q8IUM7 802 aa8.18□□□□□ -1.1
COPS3-216ENST00000579716 ETFBKMTQ8IXQ9 262 aa8.18□□□□□ -1.1
COPS3-216ENST00000579716 CMTR1Q8N1G2 835 aaKnown RBP8.18□□□□□ -1.1
COPS3-216ENST00000579716 TANGO6Q9C0B7 1094 aa8.18□□□□□ -1.1
COPS3-216ENST00000579716 CCDC189A1A4V9 331 aa8.17□□□□□ -1.1
COPS3-216ENST00000579716 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.17□□□□□ -1.1
COPS3-216ENST00000579716 SAP130Q9H0E3 1048 aa8.17□□□□□ -1.1
COPS3-216ENST00000579716 OAS3Q9Y6K5 1087 aaKnown RBP8.17□□□□□ -1.1
COPS3-216ENST00000579716 BTBD11A6QL63 1104 aa8.16□□□□□ -1.1
COPS3-216ENST00000579716 KIAA1324LA8MWY0 1029 aaPredicted RBP8.16□□□□□ -1.1
COPS3-216ENST00000579716 RRP9O43818 475 aaKnown RBP8.16□□□□□ -1.1
COPS3-216ENST00000579716 TGFB1P01137 390 aa8.16□□□□□ -1.1
COPS3-216ENST00000579716 VDRP11473 427 aa8.16□□□□□ -1.1
COPS3-216ENST00000579716 SCP2P22307 547 aa8.16□□□□□ -1.1
COPS3-216ENST00000579716 LMOD1P29536 600 aaPredicted RBP8.16□□□□□ -1.1
COPS3-216ENST00000579716 MAN1A1P33908 653 aa8.16□□□□□ -1.1
COPS3-216ENST00000579716 SOX18P35713 384 aa8.16□□□□□ -1.1
COPS3-216ENST00000579716 LMOD3Q0VAK6 560 aa8.16□□□□□ -1.1
COPS3-216ENST00000579716 FKBP5Q13451 457 aaPredicted RBP8.16□□□□□ -1.1
COPS3-216ENST00000579716 CCDC144BQ3MJ40 725 aa8.16□□□□□ -1.1
COPS3-216ENST00000579716 PDILTQ8N807 584 aa8.16□□□□□ -1.1
COPS3-216ENST00000579716 PAGR1Q9BTK6 254 aa8.16□□□□□ -1.1
COPS3-216ENST00000579716 SPC25Q9HBM1 224 aa8.16□□□□□ -1.1
COPS3-216ENST00000579716 NRBP1Q9UHY1 535 aa8.16□□□□□ -1.1
COPS3-216ENST00000579716 TBX22Q9Y458 520 aa8.16□□□□□ -1.1
COPS3-216ENST00000579716 BICDL2A1A5D9 508 aa8.15□□□□□ -1.1
COPS3-216ENST00000579716 ANP32AP39687 249 aaKnown RBP8.15□□□□□ -1.1
COPS3-216ENST00000579716 HSP90AB3PQ58FF7 597 aa8.15□□□□□ -1.1
COPS3-216ENST00000579716 CFAP70Q5T0N1 1121 aa8.15□□□□□ -1.1
COPS3-216ENST00000579716 CAPN12Q6ZSI9 719 aa8.15□□□□□ -1.1
COPS3-216ENST00000579716 ZDHHC13Q8IUH4 622 aa8.15□□□□□ -1.1
COPS3-216ENST00000579716 EGFL6Q8IUX8 553 aa8.15□□□□□ -1.1
COPS3-216ENST00000579716 PCGF6Q9BYE7 350 aa8.15□□□□□ -1.1
COPS3-216ENST00000579716 GEMIN8Q9NWZ8 242 aaKnown RBP8.15□□□□□ -1.1
COPS3-216ENST00000579716 RAXQ9Y2V3 346 aa8.15□□□□□ -1.1
COPS3-216ENST00000579716 SCINQ9Y6U3 715 aa8.15□□□□□ -1.1
COPS3-216ENST00000579716 TCERG1O14776 1098 aaKnown RBP8.14□□□□□ -1.11
COPS3-216ENST00000579716 PSAPP07602 524 aa8.14□□□□□ -1.11
COPS3-216ENST00000579716 TBX4P57082 545 aa8.14□□□□□ -1.11
COPS3-216ENST00000579716 SRPK2P78362 688 aaKnown RBP8.14□□□□□ -1.11
COPS3-216ENST00000579716 PLEKHG6Q3KR16 790 aa8.14□□□□□ -1.11
COPS3-216ENST00000579716 IRF2BPLQ9H1B7 796 aa8.14□□□□□ -1.11
COPS3-216ENST00000579716 RSPH9Q9H1X1 276 aaPredicted RBP8.14□□□□□ -1.11
COPS3-216ENST00000579716 TCEAL9Q9UHQ7 104 aa8.14□□□□□ -1.11
COPS3-216ENST00000579716 PRC1O43663 620 aa8.13□□□□□ -1.11
COPS3-216ENST00000579716 IGLV1-40P01703 118 aa8.13□□□□□ -1.11
COPS3-216ENST00000579716 TBC1D10BQ4KMP7 808 aaPredicted RBP8.13□□□□□ -1.11
COPS3-216ENST00000579716 C1orf131Q8NDD1 294 aaKnown RBP8.13□□□□□ -1.11
COPS3-216ENST00000579716 ABCF2Q9UG63 623 aa8.13□□□□□ -1.11
COPS3-216ENST00000579716 COL4A3BPQ9Y5P4 624 aa8.13□□□□□ -1.11
COPS3-216ENST00000579716 PRR19A6NJB7 356 aa8.12□□□□□ -1.11
COPS3-216ENST00000579716 LINC01387J3KSC0 135 aa8.12□□□□□ -1.11
COPS3-216ENST00000579716 S100BP04271 92 aaPredicted RBP8.12□□□□□ -1.11
COPS3-216ENST00000579716 FAM200BP0CF97 657 aa8.12□□□□□ -1.11
COPS3-216ENST00000579716 SSR1P43307 286 aaKnown RBP8.12□□□□□ -1.11
COPS3-216ENST00000579716 ATP11AP98196 1134 aa8.12□□□□□ -1.11
COPS3-216ENST00000579716 FAM69CQ0P6D2 419 aa8.12□□□□□ -1.11
COPS3-216ENST00000579716 OCLNQ16625 522 aa8.12□□□□□ -1.11
COPS3-216ENST00000579716 KIAA1211Q6ZU35 1233 aa8.12□□□□□ -1.11
COPS3-216ENST00000579716 PRIMPOLQ96LW4 560 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms