RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 RTF1Q92541 710 aaKnown RBP4.36□□□□□ -1.71
CDH19-204ENST00000579658 GMLQ99445 158 aa4.36□□□□□ -1.71
CDH19-204ENST00000579658 LAS1LQ9Y4W2 734 aaKnown RBP4.36□□□□□ -1.71
CDH19-204ENST00000579658 SH3TC1Q8TE82 1336 aa4.35□□□□□ -1.71
CDH19-204ENST00000579658 COL2A1P02458 1487 aaPredicted RBP4.35□□□□□ -1.71
CDH19-204ENST00000579658 USP17L3A6NCW0 530 aa4.35□□□□□ -1.71
CDH19-204ENST00000579658 USP17L4A6NCW7 530 aa4.35□□□□□ -1.71
CDH19-204ENST00000579658 C6orf229H3BNL8 230 aa4.35□□□□□ -1.71
CDH19-204ENST00000579658 IGF2BP3O00425 579 aaKnown RBP eCLIP4.35□□□□□ -1.71
CDH19-204ENST00000579658 ATMINO43313 823 aaPredicted RBP4.35□□□□□ -1.71
CDH19-204ENST00000579658 EGFRP00533 1210 aa4.35□□□□□ -1.71
CDH19-204ENST00000579658 NEFMP07197 916 aa4.35□□□□□ -1.71
CDH19-204ENST00000579658 SF3B3Q15393 1217 aaKnown RBP4.35□□□□□ -1.71
CDH19-204ENST00000579658 USP17L1Q7RTZ2 530 aa4.35□□□□□ -1.71
CDH19-204ENST00000579658 SHISA4Q96DD7 197 aa4.35□□□□□ -1.71
CDH19-204ENST00000579658 GDF15Q99988 308 aa4.35□□□□□ -1.71
CDH19-204ENST00000579658 R3HDMLQ9H3Y0 253 aa4.35□□□□□ -1.71
CDH19-204ENST00000579658 DBNDD1Q9H9R9 158 aa4.35□□□□□ -1.71
CDH19-204ENST00000579658 COL4A1P02462 1669 aa4.35□□□□□ -1.71
CDH19-204ENST00000579658 SOX1O00570 391 aaPredicted RBP4.35□□□□□ -1.71
CDH19-204ENST00000579658 TCERG1O14776 1098 aaKnown RBP4.35□□□□□ -1.71
CDH19-204ENST00000579658 GTF2A2P52657 109 aa4.35□□□□□ -1.71
CDH19-204ENST00000579658 MCM6Q14566 821 aa4.35□□□□□ -1.71
CDH19-204ENST00000579658 TAF7Q15545 349 aaPredicted RBP4.35□□□□□ -1.71
CDH19-204ENST00000579658 ANKRD13AQ8IZ07 590 aa4.35□□□□□ -1.71
CDH19-204ENST00000579658 SLAIN1Q8ND83 568 aa4.35□□□□□ -1.71
CDH19-204ENST00000579658 KRTAP3-3Q9BYR6 98 aa4.35□□□□□ -1.71
CDH19-204ENST00000579658 KRTAP3-2Q9BYR7 98 aa4.35□□□□□ -1.71
CDH19-204ENST00000579658 PNNQ9H307 717 aaKnown RBP4.35□□□□□ -1.71
CDH19-204ENST00000579658 ANGEL1Q9UNK9 670 aaKnown RBP4.35□□□□□ -1.71
CDH19-204ENST00000579658 ZNF804BA4D1E1 1349 aa4.35□□□□□ -1.71
CDH19-204ENST00000579658 TAF1CQ15572 869 aaPredicted RBP4.34□□□□□ -1.71
CDH19-204ENST00000579658 TAF7LQ5H9L4 462 aa4.34□□□□□ -1.71
CDH19-204ENST00000579658 DLK2Q6UY11 383 aa4.34□□□□□ -1.71
CDH19-204ENST00000579658 WWC1Q8IX03 1113 aa4.34□□□□□ -1.71
CDH19-204ENST00000579658 PARP9Q8IXQ6 854 aa4.34□□□□□ -1.71
CDH19-204ENST00000579658 TDHQ8IZJ6 230 aa4.34□□□□□ -1.71
CDH19-204ENST00000579658 TBC1D16Q8TBP0 767 aa4.34□□□□□ -1.71
CDH19-204ENST00000579658 FAM212AQ96EL1 285 aa4.34□□□□□ -1.71
CDH19-204ENST00000579658 LRCH3Q96II8 777 aa4.34□□□□□ -1.71
CDH19-204ENST00000579658 GGA1Q9UJY5 639 aa4.34□□□□□ -1.71
CDH19-204ENST00000579658 NSFL1CQ9UNZ2 370 aaKnown RBP4.34□□□□□ -1.71
CDH19-204ENST00000579658 KIAA0100Q14667 2235 aaKnown RBP4.34□□□□□ -1.71
CDH19-204ENST00000579658 TRIOBPQ9H2D6 2365 aa4.34□□□□□ -1.71
CDH19-204ENST00000579658 OTOFQ9HC10 1997 aa4.34□□□□□ -1.72
CDH19-204ENST00000579658 TNFRSF10AO00220 468 aa4.34□□□□□ -1.72
CDH19-204ENST00000579658 ATP2B4P23634 1241 aa4.34□□□□□ -1.72
CDH19-204ENST00000579658 GPTP24298 496 aa4.34□□□□□ -1.72
CDH19-204ENST00000579658 EIF4A1P60842 406 aaKnown RBP4.34□□□□□ -1.72
CDH19-204ENST00000579658 MTMR14Q8NCE2 650 aa4.34□□□□□ -1.72
CDH19-204ENST00000579658 FBXO22Q8NEZ5 403 aa4.34□□□□□ -1.72
CDH19-204ENST00000579658 TSR2Q969E8 191 aaKnown RBP4.34□□□□□ -1.72
CDH19-204ENST00000579658 ADGRA2Q96PE1 1338 aa4.34□□□□□ -1.72
CDH19-204ENST00000579658 MED23Q9ULK4 1368 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 TMEM265A0A087WTH1 108 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 ELL2O00472 640 aaPredicted RBP4.33□□□□□ -1.72
CDH19-204ENST00000579658 CHL1O00533 1208 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 ANXA1P04083 346 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 ZNF853P0CG23 659 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 CCL5P13501 91 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 GRK4P32298 578 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 GPSM2P81274 684 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 LACTBP83111 547 aaPredicted RBP4.33□□□□□ -1.72
CDH19-204ENST00000579658 C3orf67Q6ZVT6 689 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 MOB2Q70IA6 237 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 TSPYL6Q8N831 410 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 CDCA7LQ96GN5 454 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 MBIPQ9NS73 344 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 POLLQ9UGP5 575 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 SRRDQ9UH36 339 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 TSPYL4Q9UJ04 414 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 ASTN2O75129 1339 aaPredicted RBP4.33□□□□□ -1.72
CDH19-204ENST00000579658 MGAMO43451 1857 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 ALPK3Q96L96 1907 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 WTIPA6NIX2 430 aaPredicted RBP4.33□□□□□ -1.72
CDH19-204ENST00000579658 RIMBP2O15034 1052 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 MYO1BO43795 1136 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 TLR2O60603 784 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 SGPL1O95470 568 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 CETPP11597 493 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 STRIP1Q5VSL9 837 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 NECAB2Q7Z6G3 386 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 RAET1EQ8TD07 263 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 HOOK2Q96ED9 719 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 ZBED3Q96IU2 234 aaPredicted RBP4.33□□□□□ -1.72
CDH19-204ENST00000579658 LARP6Q9BRS8 491 aaKnown RBP4.33□□□□□ -1.72
CDH19-204ENST00000579658 BABAM1Q9NWV8 329 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 XDHP47989 1333 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 FANCIQ9NVI1 1328 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 ARAP2Q8WZ64 1704 aa4.33□□□□□ -1.72
CDH19-204ENST00000579658 WNT10BO00744 389 aa4.32□□□□□ -1.72
CDH19-204ENST00000579658 EIF2S2P20042 333 aaKnown RBP4.32□□□□□ -1.72
CDH19-204ENST00000579658 TNFAIP1Q13829 316 aa4.32□□□□□ -1.72
CDH19-204ENST00000579658 DOK7Q18PE1 504 aa4.32□□□□□ -1.72
CDH19-204ENST00000579658 TJAP1Q5JTD0 557 aa4.32□□□□□ -1.72
CDH19-204ENST00000579658 ZNF697Q5TEC3 545 aa4.32□□□□□ -1.72
CDH19-204ENST00000579658 SMYD5Q6GMV2 418 aa4.32□□□□□ -1.72
CDH19-204ENST00000579658 NLRP10Q86W26 655 aa4.32□□□□□ -1.72
CDH19-204ENST00000579658 C8orf58Q8NAV2 365 aa4.32□□□□□ -1.72
CDH19-204ENST00000579658 U2AF1L4Q8WU68 220 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms