RNA–Protein interactions for RNA: ENST00000579618.1

SNRPD1-203, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 5 BASIC

Gene SNRPD1, Length 320 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-203ENST00000579618 CLRN2A0PK11 232 aa12.81□□□□□ -0.36
SNRPD1-203ENST00000579618 ZBTB7BO15156 539 aaPredicted RBP12.81□□□□□ -0.36
SNRPD1-203ENST00000579618 PPP1R12BO60237 982 aaPredicted RBP12.81□□□□□ -0.36
SNRPD1-203ENST00000579618 PCCAP05165 728 aaPredicted RBP12.81□□□□□ -0.36
SNRPD1-203ENST00000579618 IGKV5-2P06315 115 aa12.81□□□□□ -0.36
SNRPD1-203ENST00000579618 NBPF12Q5TAG4 269 aaPredicted RBP12.81□□□□□ -0.36
SNRPD1-203ENST00000579618 TTLL5Q6EMB2 1281 aa12.81□□□□□ -0.36
SNRPD1-203ENST00000579618 DPF3Q92784 378 aa12.81□□□□□ -0.36
SNRPD1-203ENST00000579618 ARHGAP39Q9C0H5 1083 aa12.81□□□□□ -0.36
SNRPD1-203ENST00000579618 ELP3Q9H9T3 547 aa12.81□□□□□ -0.36
SNRPD1-203ENST00000579618 MINPP1Q9UNW1 487 aa12.81□□□□□ -0.36
SNRPD1-203ENST00000579618 ZNF804BA4D1E1 1349 aa12.81□□□□□ -0.36
SNRPD1-203ENST00000579618 A0A1B0GUL6 1792 aa12.81□□□□□ -0.36
SNRPD1-203ENST00000579618 SOX1O00570 391 aaPredicted RBP12.8□□□□□ -0.36
SNRPD1-203ENST00000579618 USP2O75604 605 aaPredicted RBP12.8□□□□□ -0.36
SNRPD1-203ENST00000579618 HSP90B1P14625 803 aaKnown RBP12.8□□□□□ -0.36
SNRPD1-203ENST00000579618 GTF2IP78347 998 aa12.8□□□□□ -0.36
SNRPD1-203ENST00000579618 GCKRQ14397 625 aa12.8□□□□□ -0.36
SNRPD1-203ENST00000579618 MTFR1Q15390 333 aa12.8□□□□□ -0.36
SNRPD1-203ENST00000579618 TAF1CQ15572 869 aaPredicted RBP12.8□□□□□ -0.36
SNRPD1-203ENST00000579618 CNKSR2Q8WXI2 1034 aa12.8□□□□□ -0.36
SNRPD1-203ENST00000579618 OPTNQ96CV9 577 aa12.8□□□□□ -0.36
SNRPD1-203ENST00000579618 MS4A4AQ96JQ5 239 aa12.8□□□□□ -0.36
SNRPD1-203ENST00000579618 C9orf78Q9NZ63 289 aaPredicted RBP12.8□□□□□ -0.36
SNRPD1-203ENST00000579618 PPP2R3BQ9Y5P8 575 aa12.8□□□□□ -0.36
SNRPD1-203ENST00000579618 UTYO14607 1347 aa12.8□□□□□ -0.36
SNRPD1-203ENST00000579618 GRM8O00222 908 aa12.79□□□□□ -0.36
SNRPD1-203ENST00000579618 IREB2P48200 963 aaKnown RBP12.79□□□□□ -0.36
SNRPD1-203ENST00000579618 MMP14P50281 582 aa12.79□□□□□ -0.36
SNRPD1-203ENST00000579618 IRX6P78412 446 aaPredicted RBP12.79□□□□□ -0.36
SNRPD1-203ENST00000579618 DLGAP5Q15398 846 aa12.79□□□□□ -0.36
SNRPD1-203ENST00000579618 CWF19L2Q2TBE0 894 aaKnown RBP12.79□□□□□ -0.36
SNRPD1-203ENST00000579618 ANKRD13AQ8IZ07 590 aa12.79□□□□□ -0.36
SNRPD1-203ENST00000579618 CERS5Q8N5B7 392 aa12.79□□□□□ -0.36
SNRPD1-203ENST00000579618 BRI3BPQ8WY22 251 aa12.79□□□□□ -0.36
SNRPD1-203ENST00000579618 LRCH3Q96II8 777 aa12.79□□□□□ -0.36
SNRPD1-203ENST00000579618 CDC5LQ99459 802 aaKnown RBP12.79□□□□□ -0.36
SNRPD1-203ENST00000579618 USP44Q9H0E7 712 aa12.79□□□□□ -0.36
SNRPD1-203ENST00000579618 VEZTQ9HBM0 779 aa12.79□□□□□ -0.36
SNRPD1-203ENST00000579618 ZBTB40Q9NUA8 1239 aa12.79□□□□□ -0.36
SNRPD1-203ENST00000579618 BSDC1Q9NW68 430 aaPredicted RBP12.79□□□□□ -0.36
SNRPD1-203ENST00000579618 ARAP2Q8WZ64 1704 aa12.79□□□□□ -0.36
SNRPD1-203ENST00000579618 UNCXA6NJT0 531 aa12.78□□□□□ -0.36
SNRPD1-203ENST00000579618 F8W031 263 aaPredicted RBP12.78□□□□□ -0.36
SNRPD1-203ENST00000579618 UBTFL1P0CB47 393 aaPredicted RBP12.78□□□□□ -0.36
SNRPD1-203ENST00000579618 CTSWP56202 376 aa12.78□□□□□ -0.36
SNRPD1-203ENST00000579618 FAM43AQ8N2R8 423 aa12.78□□□□□ -0.36
SNRPD1-203ENST00000579618 EXOC6Q8TAG9 804 aa12.78□□□□□ -0.36
SNRPD1-203ENST00000579618 GREM2Q9H772 168 aa12.78□□□□□ -0.36
SNRPD1-203ENST00000579618 ZFYVE28Q9HCC9 887 aa12.78□□□□□ -0.36
SNRPD1-203ENST00000579618 CCL15-CCL14A0A0B4J2E2 113 aa12.77□□□□□ -0.37
SNRPD1-203ENST00000579618 ECM2O94769 699 aaPredicted RBP12.77□□□□□ -0.37
SNRPD1-203ENST00000579618 GNAI2P04899 355 aa12.77□□□□□ -0.37
SNRPD1-203ENST00000579618 ARHGEF6Q15052 776 aa12.77□□□□□ -0.37
SNRPD1-203ENST00000579618 CCL15Q16663 113 aa12.77□□□□□ -0.37
SNRPD1-203ENST00000579618 SUPT20HL1Q3ZLR7 823 aa12.77□□□□□ -0.37
SNRPD1-203ENST00000579618 CFAP100Q494V2 611 aa12.77□□□□□ -0.37
SNRPD1-203ENST00000579618 CDAN1Q8IWY9 1227 aa12.77□□□□□ -0.37
SNRPD1-203ENST00000579618 MTMR14Q8NCE2 650 aa12.77□□□□□ -0.37
SNRPD1-203ENST00000579618 CEP290O15078 2479 aa12.77□□□□□ -0.37
SNRPD1-203ENST00000579618 A0A0C4DFX4 3053 aa12.76□□□□□ -0.37
SNRPD1-203ENST00000579618 SPDYE2BA6NHP3 402 aa12.76□□□□□ -0.37
SNRPD1-203ENST00000579618 H7C1W4 665 aa12.76□□□□□ -0.37
SNRPD1-203ENST00000579618 SPDYE6P0CI01 402 aa12.76□□□□□ -0.37
SNRPD1-203ENST00000579618 MNX1P50219 401 aaPredicted RBP12.76□□□□□ -0.37
SNRPD1-203ENST00000579618 UBE2Q1Q7Z7E8 422 aa12.76□□□□□ -0.37
SNRPD1-203ENST00000579618 TTLL11Q8NHH1 800 aa12.76□□□□□ -0.37
SNRPD1-203ENST00000579618 PRMT6Q96LA8 375 aaPredicted RBP12.76□□□□□ -0.37
SNRPD1-203ENST00000579618 MEIS3Q99687 375 aa12.76□□□□□ -0.37
SNRPD1-203ENST00000579618 LEMD3Q9Y2U8 911 aa12.76□□□□□ -0.37
SNRPD1-203ENST00000579618 LAMA3Q16787 3333 aa12.75□□□□□ -0.37
SNRPD1-203ENST00000579618 LACTBP83111 547 aaPredicted RBP12.75□□□□□ -0.37
SNRPD1-203ENST00000579618 RASA3Q14644 834 aa12.75□□□□□ -0.37
SNRPD1-203ENST00000579618 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.75□□□□□ -0.37
SNRPD1-203ENST00000579618 CD209Q9NNX6 404 aa12.75□□□□□ -0.37
SNRPD1-203ENST00000579618 IRS2Q9Y4H2 1338 aa12.74□□□□□ -0.37
SNRPD1-203ENST00000579618 SNAP23O00161 211 aa12.74□□□□□ -0.37
SNRPD1-203ENST00000579618 MYO1BO43795 1136 aa12.74□□□□□ -0.37
SNRPD1-203ENST00000579618 NBPF7P0C2Y1 421 aaPredicted RBP12.74□□□□□ -0.37
SNRPD1-203ENST00000579618 CTGFP29279 349 aa12.74□□□□□ -0.37
SNRPD1-203ENST00000579618 VGLL4Q14135 290 aa12.74□□□□□ -0.37
SNRPD1-203ENST00000579618 UBE3BQ7Z3V4 1068 aa12.74□□□□□ -0.37
SNRPD1-203ENST00000579618 RPAP2Q8IXW5 612 aaPredicted RBP12.74□□□□□ -0.37
SNRPD1-203ENST00000579618 PLA2G12BQ9BX93 195 aa12.74□□□□□ -0.37
SNRPD1-203ENST00000579618 PPP4R2Q9NY27 417 aa12.74□□□□□ -0.37
SNRPD1-203ENST00000579618 JAG2Q9Y219 1238 aa12.74□□□□□ -0.37
SNRPD1-203ENST00000579618 ALPK3Q96L96 1907 aa12.74□□□□□ -0.37
SNRPD1-203ENST00000579618 UNC80Q8N2C7 3258 aa12.73□□□□□ -0.37
SNRPD1-203ENST00000579618 TLR2O60603 784 aa12.73□□□□□ -0.37
SNRPD1-203ENST00000579618 GTF2A2P52657 109 aa12.73□□□□□ -0.37
SNRPD1-203ENST00000579618 CASP7P55210 303 aa12.73□□□□□ -0.37
SNRPD1-203ENST00000579618 KIF22Q14807 665 aa12.73□□□□□ -0.37
SNRPD1-203ENST00000579618 HTATIP2Q9BUP3 242 aa12.73□□□□□ -0.37
SNRPD1-203ENST00000579618 A0A1W2PPC1 479 aa12.72□□□□□ -0.37
SNRPD1-203ENST00000579618 HMMRO75330 724 aa12.72□□□□□ -0.37
SNRPD1-203ENST00000579618 IGHMBP2P38935 993 aaKnown RBP12.72□□□□□ -0.37
SNRPD1-203ENST00000579618 GJA8P48165 433 aa12.72□□□□□ -0.37
SNRPD1-203ENST00000579618 MTX1Q13505 466 aa12.72□□□□□ -0.37
SNRPD1-203ENST00000579618 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.72□□□□□ -0.375e-6■□□□□ 10.2
SNRPD1-203ENST00000579618 TEPSINQ96N21 525 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms