RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-213ENST00000579609 GPAA1O43292 621 aa10.43□□□□□ -0.74
PPP4R1-213ENST00000579609 ONECUT3O60422 494 aaPredicted RBP10.43□□□□□ -0.74
PPP4R1-213ENST00000579609 PCP11498 1178 aaKnown RBP10.43□□□□□ -0.74
PPP4R1-213ENST00000579609 CPA1P15085 419 aa10.43□□□□□ -0.74
PPP4R1-213ENST00000579609 FGD1P98174 961 aa10.43□□□□□ -0.74
PPP4R1-213ENST00000579609 TRDNQ13061 729 aa10.43□□□□□ -0.74
PPP4R1-213ENST00000579609 WASHC4Q2M389 1173 aa10.43□□□□□ -0.74
PPP4R1-213ENST00000579609 CCDC129Q6ZRS4 1044 aa10.43□□□□□ -0.74
PPP4R1-213ENST00000579609 STOX1Q6ZVD7 989 aa10.43□□□□□ -0.74
PPP4R1-213ENST00000579609 GAS2L3Q86XJ1 694 aa10.43□□□□□ -0.74
PPP4R1-213ENST00000579609 SPATA5Q8NB90 893 aa10.43□□□□□ -0.74
PPP4R1-213ENST00000579609 TMEM87BQ96K49 555 aa10.43□□□□□ -0.74
PPP4R1-213ENST00000579609 ARXQ96QS3 562 aa10.43□□□□□ -0.74
PPP4R1-213ENST00000579609 CNNM2Q9H8M5 875 aa10.43□□□□□ -0.74
PPP4R1-213ENST00000579609 GNL3LQ9NVN8 582 aaKnown RBP10.43□□□□□ -0.74
PPP4R1-213ENST00000579609 BSDC1Q9NW68 430 aaPredicted RBP10.43□□□□□ -0.74
PPP4R1-213ENST00000579609 TMEM63CQ9P1W3 806 aa10.43□□□□□ -0.74
PPP4R1-213ENST00000579609 CFAP45Q9UL16 551 aa10.43□□□□□ -0.74
PPP4R1-213ENST00000579609 CCDC9Q9Y3X0 531 aaKnown RBP10.43□□□□□ -0.74
PPP4R1-213ENST00000579609 MYO5AQ9Y4I1 1855 aaKnown RBP10.42□□□□□ -0.74
PPP4R1-213ENST00000579609 TCRBV5S4A2TA0A5A2 114 aa10.42□□□□□ -0.74
PPP4R1-213ENST00000579609 CAVIN2O95810 425 aa10.42□□□□□ -0.74
PPP4R1-213ENST00000579609 FGAP02671 866 aa10.42□□□□□ -0.74
PPP4R1-213ENST00000579609 SLC9C2Q5TAH2 1124 aa10.42□□□□□ -0.74
PPP4R1-213ENST00000579609 RALYLQ86SE5 291 aaKnown RBP10.42□□□□□ -0.74
PPP4R1-213ENST00000579609 MB21D2Q8IYB1 491 aaPredicted RBP10.42□□□□□ -0.74
PPP4R1-213ENST00000579609 NSUN7Q8NE18 718 aaKnown RBP10.42□□□□□ -0.74
PPP4R1-213ENST00000579609 BRF1Q92994 677 aa10.42□□□□□ -0.74
PPP4R1-213ENST00000579609 NGLY1Q96IV0 654 aa10.42□□□□□ -0.74
PPP4R1-213ENST00000579609 MS4A4AQ96JQ5 239 aa10.42□□□□□ -0.74
PPP4R1-213ENST00000579609 PDLIM2Q96JY6 352 aa10.42□□□□□ -0.74
PPP4R1-213ENST00000579609 CCDC88AQ3V6T2 1871 aa10.41□□□□□ -0.74
PPP4R1-213ENST00000579609 VPS37CA5D8V6 355 aaPredicted RBP10.41□□□□□ -0.74
PPP4R1-213ENST00000579609 FOXP2O15409 715 aa10.41□□□□□ -0.74
PPP4R1-213ENST00000579609 CDKL5O76039 1030 aa10.41□□□□□ -0.74
PPP4R1-213ENST00000579609 PDE6AP16499 860 aa10.41□□□□□ -0.74
PPP4R1-213ENST00000579609 SCARF1Q14162 830 aa10.41□□□□□ -0.74
PPP4R1-213ENST00000579609 PPP2R5BQ15173 497 aa10.41□□□□□ -0.74
PPP4R1-213ENST00000579609 GIMAP6Q6P9H5 292 aa10.41□□□□□ -0.74
PPP4R1-213ENST00000579609 ANKRD18AQ8IVF6 992 aa10.41□□□□□ -0.74
PPP4R1-213ENST00000579609 NACAP1Q9BZK3 213 aa10.41□□□□□ -0.74
PPP4R1-213ENST00000579609 ANKRD2Q9GZV1 360 aa10.41□□□□□ -0.74
PPP4R1-213ENST00000579609 TSPY26PQ9H489 355 aa10.41□□□□□ -0.74
PPP4R1-213ENST00000579609 DDX19AQ9NUU7 478 aaKnown RBP10.41□□□□□ -0.74
PPP4R1-213ENST00000579609 WDR70Q9NW82 654 aa10.41□□□□□ -0.74
PPP4R1-213ENST00000579609 BRPF3Q9ULD4 1205 aa10.41□□□□□ -0.74
PPP4R1-213ENST00000579609 NUTM2BA6NNL0 878 aaPredicted RBP10.4□□□□□ -0.74
PPP4R1-213ENST00000579609 NUTM2EB1AL46 878 aaPredicted RBP10.4□□□□□ -0.74
PPP4R1-213ENST00000579609 PATL2C9JE40 543 aaKnown RBP10.4□□□□□ -0.74
PPP4R1-213ENST00000579609 PDIA3P30101 505 aaKnown RBP10.4□□□□□ -0.74
PPP4R1-213ENST00000579609 LIFRP42702 1097 aa10.4□□□□□ -0.74
PPP4R1-213ENST00000579609 PHKA1P46020 1223 aa10.4□□□□□ -0.74
PPP4R1-213ENST00000579609 SCRN1Q12765 414 aa10.4□□□□□ -0.74
PPP4R1-213ENST00000579609 FAM98CQ17RN3 349 aaKnown RBP10.4□□□□□ -0.74
PPP4R1-213ENST00000579609 CPLX2Q6PUV4 134 aaKnown RBP10.4□□□□□ -0.74
PPP4R1-213ENST00000579609 SGMS1Q86VZ5 419 aa10.4□□□□□ -0.74
PPP4R1-213ENST00000579609 NUTM2AQ8IVF1 878 aaPredicted RBP10.4□□□□□ -0.74
PPP4R1-213ENST00000579609 SYNE4Q8N205 404 aa10.4□□□□□ -0.74
PPP4R1-213ENST00000579609 NECAB1Q8N987 351 aa10.4□□□□□ -0.74
PPP4R1-213ENST00000579609 LINC00116Q8NCU8 138 aa10.4□□□□□ -0.74
PPP4R1-213ENST00000579609 KCNV2Q8TDN2 545 aa10.4□□□□□ -0.74
PPP4R1-213ENST00000579609 AIDAQ96BJ3 306 aa10.4□□□□□ -0.74
PPP4R1-213ENST00000579609 ACSBG1Q96GR2 724 aa10.4□□□□□ -0.74
PPP4R1-213ENST00000579609 ZNF396Q96N95 335 aaPredicted RBP10.4□□□□□ -0.74
PPP4R1-213ENST00000579609 STRBPQ96SI9 672 aaKnown RBP10.4□□□□□ -0.74
PPP4R1-213ENST00000579609 PUS7LQ9H0K6 701 aaKnown RBP10.4□□□□□ -0.74
PPP4R1-213ENST00000579609 RNF41Q9H4P4 317 aaPredicted RBP10.4□□□□□ -0.74
PPP4R1-213ENST00000579609 DENND2AQ9ULE3 1009 aa10.4□□□□□ -0.74
PPP4R1-213ENST00000579609 TAF6LQ9Y6J9 622 aa10.4□□□□□ -0.74
PPP4R1-213ENST00000579609 NDUFB9Q9Y6M9 179 aa10.4□□□□□ -0.74
PPP4R1-213ENST00000579609 ZNF532Q9HCE3 1301 aa10.39□□□□□ -0.75
PPP4R1-213ENST00000579609 STK36Q9NRP7 1315 aa10.39□□□□□ -0.75
PPP4R1-213ENST00000579609 UBR3Q6ZT12 1888 aa10.39□□□□□ -0.75
PPP4R1-213ENST00000579609 H3BQV1 296 aa10.39□□□□□ -0.75
PPP4R1-213ENST00000579609 CHRNDQ07001 517 aa10.39□□□□□ -0.75
PPP4R1-213ENST00000579609 RESTQ13127 1097 aa10.39□□□□□ -0.75
PPP4R1-213ENST00000579609 IFFO2Q5TF58 517 aa10.39□□□□□ -0.75
PPP4R1-213ENST00000579609 TPTE2Q6XPS3 522 aa10.39□□□□□ -0.75
PPP4R1-213ENST00000579609 BRAPQ7Z569 592 aa10.39□□□□□ -0.75
PPP4R1-213ENST00000579609 CERS3Q8IU89 383 aa10.39□□□□□ -0.75
PPP4R1-213ENST00000579609 TMTC2Q8N394 836 aa10.39□□□□□ -0.75
PPP4R1-213ENST00000579609 TRIM44Q96DX7 344 aaPredicted RBP10.39□□□□□ -0.75
PPP4R1-213ENST00000579609 KRT23Q9C075 422 aa10.39□□□□□ -0.75
PPP4R1-213ENST00000579609 ANAPC4Q9UJX5 808 aa10.39□□□□□ -0.75
PPP4R1-213ENST00000579609 USP21Q9UK80 565 aa10.39□□□□□ -0.75
PPP4R1-213ENST00000579609 ANGEL1Q9UNK9 670 aaKnown RBP10.39□□□□□ -0.75
PPP4R1-213ENST00000579609 CNPY2Q9Y2B0 182 aa10.39□□□□□ -0.75
PPP4R1-213ENST00000579609 LAMB1P07942 1786 aa10.39□□□□□ -0.75
PPP4R1-213ENST00000579609 DLEC1Q9Y238 1755 aa10.39□□□□□ -0.75
PPP4R1-213ENST00000579609 CACNA1SQ13698 1873 aa10.38□□□□□ -0.75
PPP4R1-213ENST00000579609 PTPDC1A2A3K4 754 aa10.38□□□□□ -0.75
PPP4R1-213ENST00000579609 CTAGE5O15320 804 aa10.38□□□□□ -0.75
PPP4R1-213ENST00000579609 PRC1O43663 620 aa10.38□□□□□ -0.75
PPP4R1-213ENST00000579609 IDH1O75874 414 aaKnown RBP10.38□□□□□ -0.75
PPP4R1-213ENST00000579609 HCLS1P14317 486 aaPredicted RBP10.38□□□□□ -0.75
PPP4R1-213ENST00000579609 DNM1Q05193 864 aaKnown RBP10.38□□□□□ -0.75
PPP4R1-213ENST00000579609 RASGRF1Q13972 1273 aa10.38□□□□□ -0.75
PPP4R1-213ENST00000579609 CAVIN4Q5BKX8 364 aa10.38□□□□□ -0.75
PPP4R1-213ENST00000579609 RBM43Q6ZSC3 357 aaKnown RBP10.38□□□□□ -0.75
PPP4R1-213ENST00000579609 CDC37L1Q7L3B6 337 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms