RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 CT47B1P0C2W7 299 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP3-211ENST00000578996 TNNI2P48788 182 aa11.5□□□□□ -0.57
CDK5RAP3-211ENST00000578996 MLLT1Q03111 559 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP3-211ENST00000578996 MAP3K11Q16584 847 aa11.5□□□□□ -0.57
CDK5RAP3-211ENST00000578996 TRMT2AQ8IZ69 625 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP3-211ENST00000578996 TEKT1Q969V4 418 aa11.5□□□□□ -0.57
CDK5RAP3-211ENST00000578996 WNK4Q96J92 1243 aa11.5□□□□□ -0.57
CDK5RAP3-211ENST00000578996 MANSC4A6NHS7 340 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP3-211ENST00000578996 GPR25O00155 361 aa11.49□□□□□ -0.57
CDK5RAP3-211ENST00000578996 USP2O75604 605 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP3-211ENST00000578996 RFX5P48382 616 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP3-211ENST00000578996 CACNB3P54284 484 aa11.49□□□□□ -0.57
CDK5RAP3-211ENST00000578996 CDAN1Q8IWY9 1227 aa11.49□□□□□ -0.57
CDK5RAP3-211ENST00000578996 ANKRD13AQ8IZ07 590 aa11.49□□□□□ -0.57
CDK5RAP3-211ENST00000578996 LPIN2Q92539 896 aa11.49□□□□□ -0.57
CDK5RAP3-211ENST00000578996 TMEM39BQ9GZU3 492 aa11.49□□□□□ -0.57
CDK5RAP3-211ENST00000578996 ELP3Q9H9T3 547 aa11.49□□□□□ -0.57
CDK5RAP3-211ENST00000578996 TMOD2Q9NZR1 351 aa11.49□□□□□ -0.57
CDK5RAP3-211ENST00000578996 LRRFIP2Q9Y608 721 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-211ENST00000578996 ALDH1A1P00352 501 aa11.48□□□□□ -0.57
CDK5RAP3-211ENST00000578996 ZBTB48P10074 688 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP3-211ENST00000578996 FGFR2P21802 821 aa11.48□□□□□ -0.57
CDK5RAP3-211ENST00000578996 SOX10P56693 466 aa11.48□□□□□ -0.57
CDK5RAP3-211ENST00000578996 ATG9AQ7Z3C6 839 aa11.48□□□□□ -0.57
CDK5RAP3-211ENST00000578996 IFNL1Q8IU54 200 aa11.48□□□□□ -0.57
CDK5RAP3-211ENST00000578996 MEIS3Q99687 375 aa11.48□□□□□ -0.57
CDK5RAP3-211ENST00000578996 CEP126Q9P2H0 1117 aa11.48□□□□□ -0.57
CDK5RAP3-211ENST00000578996 PA2G4Q9UQ80 394 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-211ENST00000578996 MAST3O60307 1309 aa11.48□□□□□ -0.57
CDK5RAP3-211ENST00000578996 KIF16BQ96L93 1317 aa11.48□□□□□ -0.57
CDK5RAP3-211ENST00000578996 FKTNO75072 461 aa11.47□□□□□ -0.57
CDK5RAP3-211ENST00000578996 RARSP54136 660 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-211ENST00000578996 INHBEP58166 350 aa11.47□□□□□ -0.57
CDK5RAP3-211ENST00000578996 HDLBPQ00341 1268 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-211ENST00000578996 ATP2B3Q16720 1220 aa11.47□□□□□ -0.57
CDK5RAP3-211ENST00000578996 FRAT1Q92837 279 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-211ENST00000578996 OPTNQ96CV9 577 aa11.47□□□□□ -0.57
CDK5RAP3-211ENST00000578996 R3HDMLQ9H3Y0 253 aa11.47□□□□□ -0.57
CDK5RAP3-211ENST00000578996 HDAC5Q9UQL6 1122 aa11.47□□□□□ -0.57
CDK5RAP3-211ENST00000578996 UNCXA6NJT0 531 aa11.46□□□□□ -0.57
CDK5RAP3-211ENST00000578996 IGF2BP3O00425 579 aaKnown RBP eCLIP11.46□□□□□ -0.57
CDK5RAP3-211ENST00000578996 GJA5P36382 358 aa11.46□□□□□ -0.57
CDK5RAP3-211ENST00000578996 PKN2Q16513 984 aaKnown RBP11.46□□□□□ -0.57
CDK5RAP3-211ENST00000578996 OTUD7BQ6GQQ9 843 aa11.46□□□□□ -0.57
CDK5RAP3-211ENST00000578996 WDR66Q8TBY9 1149 aa11.46□□□□□ -0.57
CDK5RAP3-211ENST00000578996 ZDHHC15Q96MV8 337 aa11.46□□□□□ -0.57
CDK5RAP3-211ENST00000578996 TEPSINQ96N21 525 aa11.46□□□□□ -0.57
CDK5RAP3-211ENST00000578996 GNL3LQ9NVN8 582 aaKnown RBP11.46□□□□□ -0.57
CDK5RAP3-211ENST00000578996 HPS5Q9UPZ3 1129 aa11.46□□□□□ -0.57
CDK5RAP3-211ENST00000578996 CSADQ9Y600 493 aa11.46□□□□□ -0.57
CDK5RAP3-211ENST00000578996 CIAO1O76071 339 aa11.45□□□□□ -0.58
CDK5RAP3-211ENST00000578996 IL15P40933 162 aaPredicted RBP11.45□□□□□ -0.58
CDK5RAP3-211ENST00000578996 RGS19P49795 217 aa11.45□□□□□ -0.58
CDK5RAP3-211ENST00000578996 VGLL4Q14135 290 aa11.45□□□□□ -0.58
CDK5RAP3-211ENST00000578996 CNKSR2Q8WXI2 1034 aa11.45□□□□□ -0.58
CDK5RAP3-211ENST00000578996 FBXO3Q9UK99 471 aa11.45□□□□□ -0.58
CDK5RAP3-211ENST00000578996 SUGT1Q9Y2Z0 365 aa11.45□□□□□ -0.58
CDK5RAP3-211ENST00000578996 SRGAP3O43295 1099 aa11.44□□□□□ -0.58
CDK5RAP3-211ENST00000578996 GNAI3P08754 354 aa11.44□□□□□ -0.58
CDK5RAP3-211ENST00000578996 PRDX5P30044 214 aa11.44□□□□□ -0.58
CDK5RAP3-211ENST00000578996 PHKA1P46020 1223 aa11.44□□□□□ -0.58
CDK5RAP3-211ENST00000578996 MAP3K9P80192 1104 aa11.44□□□□□ -0.58
CDK5RAP3-211ENST00000578996 DIXDC1Q155Q3 683 aa11.44□□□□□ -0.58
CDK5RAP3-211ENST00000578996 APOBEC3HQ6NTF7 200 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP3-211ENST00000578996 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP3-211ENST00000578996 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.44□□□□□ -0.58
CDK5RAP3-211ENST00000578996 CLUAP1Q96AJ1 413 aa11.44□□□□□ -0.58
CDK5RAP3-211ENST00000578996 OTUD5Q96G74 571 aa11.44□□□□□ -0.58
CDK5RAP3-211ENST00000578996 WRNIP1Q96S55 665 aa11.44□□□□□ -0.58
CDK5RAP3-211ENST00000578996 CFHR5Q9BXR6 569 aa11.44□□□□□ -0.58
CDK5RAP3-211ENST00000578996 OTOFQ9HC10 1997 aa11.44□□□□□ -0.58
CDK5RAP3-211ENST00000578996 IPO8O15397 1037 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP3-211ENST00000578996 BCAR3O75815 825 aa11.43□□□□□ -0.58
CDK5RAP3-211ENST00000578996 LDHBP07195 334 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP3-211ENST00000578996 ADORA1P30542 326 aa11.43□□□□□ -0.58
CDK5RAP3-211ENST00000578996 TCP10Q12799 353 aa11.43□□□□□ -0.58
CDK5RAP3-211ENST00000578996 CRHR2Q13324 411 aa11.43□□□□□ -0.58
CDK5RAP3-211ENST00000578996 NOM1Q5C9Z4 860 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP3-211ENST00000578996 INTS3Q68E01 1043 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP3-211ENST00000578996 HHIPL2Q6UWX4 724 aa11.43□□□□□ -0.58
CDK5RAP3-211ENST00000578996 ARHGAP45Q92619 1136 aa11.43□□□□□ -0.58
CDK5RAP3-211ENST00000578996 MRIQ9BWK5 157 aa11.43□□□□□ -0.58
CDK5RAP3-211ENST00000578996 DENND2AQ9ULE3 1009 aa11.43□□□□□ -0.58
CDK5RAP3-211ENST00000578996 TNNQ9UQP3 1299 aa11.43□□□□□ -0.58
CDK5RAP3-211ENST00000578996 TRIM17Q9Y577 477 aa11.43□□□□□ -0.58
CDK5RAP3-211ENST00000578996 MYH13Q9UKX3 1938 aa11.43□□□□□ -0.58
CDK5RAP3-211ENST00000578996 CCL15-CCL14A0A0B4J2E2 113 aa11.42□□□□□ -0.58
CDK5RAP3-211ENST00000578996 TRIM27P14373 513 aa11.42□□□□□ -0.58
CDK5RAP3-211ENST00000578996 GTF2A2P52657 109 aa11.42□□□□□ -0.58
CDK5RAP3-211ENST00000578996 TIMM10P62072 90 aa11.42□□□□□ -0.58
CDK5RAP3-211ENST00000578996 HNRNPUQ00839 825 aaKnown RBP eCLIP11.42□□□□□ -0.58
CDK5RAP3-211ENST00000578996 CCL15Q16663 113 aa11.42□□□□□ -0.58
CDK5RAP3-211ENST00000578996 DCAF15Q66K64 600 aa11.42□□□□□ -0.58
CDK5RAP3-211ENST00000578996 CCDC102BQ68D86 513 aa11.42□□□□□ -0.58
CDK5RAP3-211ENST00000578996 FBXO46Q6PJ61 603 aaPredicted RBP11.42□□□□□ -0.58
CDK5RAP3-211ENST00000578996 MIGA2Q7L4E1 593 aa11.42□□□□□ -0.58
CDK5RAP3-211ENST00000578996 FAM83AQ86UY5 434 aa11.42□□□□□ -0.58
CDK5RAP3-211ENST00000578996 CD99L2Q8TCZ2 262 aa11.42□□□□□ -0.58
CDK5RAP3-211ENST00000578996 ZKSCAN4Q969J2 545 aaPredicted RBP11.42□□□□□ -0.58
CDK5RAP3-211ENST00000578996 HOOK2Q96ED9 719 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms