RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 HDLBPQ00341 1268 aaKnown RBP18.81■□□□□ 0.6
IFT20-208ENST00000578985 NBPF9Q3BBW0 867 aa18.81■□□□□ 0.6
IFT20-208ENST00000578985 SPTY2D1Q68D10 685 aaPredicted RBP18.81■□□□□ 0.6
IFT20-208ENST00000578985 SMC5Q8IY18 1101 aa18.81■□□□□ 0.6
IFT20-208ENST00000578985 CNTROBQ8N137 903 aa18.81■□□□□ 0.6
IFT20-208ENST00000578985 ZBED3Q96IU2 234 aaPredicted RBP18.81■□□□□ 0.6
IFT20-208ENST00000578985 SERPINA10Q9UK55 444 aa18.81■□□□□ 0.6
IFT20-208ENST00000578985 ECM29Q5VYK3 1845 aa18.81■□□□□ 0.6
IFT20-208ENST00000578985 MYH2Q9UKX2 1941 aa18.8■□□□□ 0.6
IFT20-208ENST00000578985 ASTN2O75129 1339 aaPredicted RBP18.8■□□□□ 0.6
IFT20-208ENST00000578985 MYO5AQ9Y4I1 1855 aaKnown RBP18.8■□□□□ 0.6
IFT20-208ENST00000578985 WNT10BO00744 389 aa18.8■□□□□ 0.6
IFT20-208ENST00000578985 PRDX5P30044 214 aa18.8■□□□□ 0.6
IFT20-208ENST00000578985 ZAP70P43403 619 aa18.8■□□□□ 0.6
IFT20-208ENST00000578985 CRKP46108 304 aa18.8■□□□□ 0.6
IFT20-208ENST00000578985 TBC1D9Q6ZT07 1266 aa18.8■□□□□ 0.6
IFT20-208ENST00000578985 MRIQ9BWK5 157 aa18.8■□□□□ 0.6
IFT20-208ENST00000578985 PCDHAC2Q9Y5I4 1007 aa18.8■□□□□ 0.6
IFT20-208ENST00000578985 NEFLP07196 543 aa18.79■□□□□ 0.6
IFT20-208ENST00000578985 ERICH6Q7L0X2 663 aa18.79■□□□□ 0.6
IFT20-208ENST00000578985 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.79■□□□□ 0.6
IFT20-208ENST00000578985 TEKT1Q969V4 418 aa18.79■□□□□ 0.6
IFT20-208ENST00000578985 DCPSQ96C86 337 aaKnown RBP18.79■□□□□ 0.6
IFT20-208ENST00000578985 PRMT6Q96LA8 375 aaPredicted RBP18.79■□□□□ 0.6
IFT20-208ENST00000578985 GGA3Q9NZ52 723 aa18.79■□□□□ 0.6
IFT20-208ENST00000578985 SPDYE2BA6NHP3 402 aa18.78■□□□□ 0.6
IFT20-208ENST00000578985 ITGBL1O95965 494 aaPredicted RBP18.78■□□□□ 0.6
IFT20-208ENST00000578985 CYP2E1P05181 493 aaPredicted RBP18.78■□□□□ 0.6
IFT20-208ENST00000578985 SPDYE6P0CI01 402 aa18.78■□□□□ 0.6
IFT20-208ENST00000578985 ATP5JP18859 108 aa18.78■□□□□ 0.6
IFT20-208ENST00000578985 ANGEL2Q5VTE6 544 aaKnown RBP18.78■□□□□ 0.6
IFT20-208ENST00000578985 HHIPL2Q6UWX4 724 aa18.78■□□□□ 0.6
IFT20-208ENST00000578985 B4GALNT3Q6L9W6 998 aa18.77■□□□□ 0.6
IFT20-208ENST00000578985 DZIP1Q86YF9 867 aaKnown RBP18.77■□□□□ 0.6
IFT20-208ENST00000578985 GPATCH3Q96I76 525 aa18.77■□□□□ 0.6
IFT20-208ENST00000578985 ZDHHC15Q96MV8 337 aa18.77■□□□□ 0.6
IFT20-208ENST00000578985 LRP2BPQ9P2M1 347 aa18.77■□□□□ 0.6
IFT20-208ENST00000578985 PITPNM2Q9BZ72 1349 aa18.76■□□□□ 0.59
IFT20-208ENST00000578985 MYO1BO43795 1136 aa18.76■□□□□ 0.59
IFT20-208ENST00000578985 DIXDC1Q155Q3 683 aa18.76■□□□□ 0.59
IFT20-208ENST00000578985 CDC37L1Q7L3B6 337 aa18.76■□□□□ 0.59
IFT20-208ENST00000578985 KRT26Q7Z3Y9 468 aa18.76■□□□□ 0.59
IFT20-208ENST00000578985 USP48Q86UV5 1035 aa18.76■□□□□ 0.59
IFT20-208ENST00000578985 GLIS2Q9BZE0 524 aaPredicted RBP18.76■□□□□ 0.59
IFT20-208ENST00000578985 BOLA2Q9H3K6 86 aa18.76■□□□□ 0.59
IFT20-208ENST00000578985 PIH1D3Q9NQM4 214 aaKnown RBP18.76■□□□□ 0.59
IFT20-208ENST00000578985 ECHDC1Q9NTX5 307 aa18.76■□□□□ 0.59
IFT20-208ENST00000578985 RAI14Q9P0K7 980 aa18.76■□□□□ 0.59
IFT20-208ENST00000578985 NDUFB9Q9Y6M9 179 aa18.76■□□□□ 0.59
IFT20-208ENST00000578985 TRPM7Q96QT4 1865 aa18.75■□□□□ 0.59
IFT20-208ENST00000578985 MECOMQ03112 1051 aa18.75■□□□□ 0.59
IFT20-208ENST00000578985 SULF1Q8IWU6 871 aa18.75■□□□□ 0.59
IFT20-208ENST00000578985 SLF2Q8IX21 1173 aa18.75■□□□□ 0.59
IFT20-208ENST00000578985 OTUD7AQ8TE49 926 aaPredicted RBP18.75■□□□□ 0.59
IFT20-208ENST00000578985 DNAJC2Q99543 621 aaKnown RBP18.75■□□□□ 0.59
IFT20-208ENST00000578985 DAGLAQ9Y4D2 1042 aa18.75■□□□□ 0.59
IFT20-208ENST00000578985 AOX1Q06278 1338 aa18.74■□□□□ 0.59
IFT20-208ENST00000578985 CLRN2A0PK11 232 aa18.74■□□□□ 0.59
IFT20-208ENST00000578985 ADM5C9JUS6 153 aa18.74■□□□□ 0.59
IFT20-208ENST00000578985 TRAF5O00463 557 aa18.74■□□□□ 0.59
IFT20-208ENST00000578985 GSTO1P78417 241 aa18.74■□□□□ 0.59
IFT20-208ENST00000578985 NUCB1Q02818 461 aa18.74■□□□□ 0.59
IFT20-208ENST00000578985 APOBEC3FQ8IUX4 373 aaKnown RBP18.74■□□□□ 0.59
IFT20-208ENST00000578985 HAUS7Q99871 368 aa18.74■□□□□ 0.59
IFT20-208ENST00000578985 LNPKQ9C0E8 428 aa18.74■□□□□ 0.59
IFT20-208ENST00000578985 ANTXR1Q9H6X2 564 aa18.74■□□□□ 0.59
IFT20-208ENST00000578985 TDRD3Q9H7E2 651 aaKnown RBP18.74■□□□□ 0.59
IFT20-208ENST00000578985 ZNF70Q9UC06 446 aaPredicted RBP18.74■□□□□ 0.59
IFT20-208ENST00000578985 DOCK2Q92608 1830 aa18.74■□□□□ 0.59
IFT20-208ENST00000578985 PASKQ96RG2 1323 aa18.74■□□□□ 0.59
IFT20-208ENST00000578985 MAST2Q6P0Q8 1798 aa18.73■□□□□ 0.59
IFT20-208ENST00000578985 LDHCP07864 332 aa18.73■□□□□ 0.59
IFT20-208ENST00000578985 TTF1Q15361 905 aaPredicted RBP18.73■□□□□ 0.59
IFT20-208ENST00000578985 SPDYE2Q495Y8 402 aa18.73■□□□□ 0.59
IFT20-208ENST00000578985 APOBEC3HQ6NTF7 200 aaKnown RBP18.73■□□□□ 0.59
IFT20-208ENST00000578985 CHD1LQ86WJ1 897 aa18.73■□□□□ 0.59
IFT20-208ENST00000578985 ZNF384Q8TF68 577 aa18.73■□□□□ 0.59
IFT20-208ENST00000578985 NSUN4Q96CB9 384 aaKnown RBP18.73■□□□□ 0.59
IFT20-208ENST00000578985 TTC41PQ6P2S7 1318 aa18.73■□□□□ 0.59
IFT20-208ENST00000578985 GOLIM4O00461 696 aa18.72■□□□□ 0.59
IFT20-208ENST00000578985 IGSF3O75054 1194 aa18.72■□□□□ 0.59
IFT20-208ENST00000578985 IDH1O75874 414 aaKnown RBP18.72■□□□□ 0.59
IFT20-208ENST00000578985 MX1P20591 662 aa18.72■□□□□ 0.59
IFT20-208ENST00000578985 FMR1Q06787 632 aaKnown RBP eCLIP18.72■□□□□ 0.59
IFT20-208ENST00000578985 TSHZ3Q63HK5 1081 aa18.72■□□□□ 0.59
IFT20-208ENST00000578985 FAM163AQ96GL9 167 aaPredicted RBP18.72■□□□□ 0.59
IFT20-208ENST00000578985 VEZTQ9HBM0 779 aa18.72■□□□□ 0.59
IFT20-208ENST00000578985 SCAF8Q9UPN6 1271 aaKnown RBP18.72■□□□□ 0.59
IFT20-208ENST00000578985 MROH7-TTC4A0A0A0MT08 1334 aa18.72■□□□□ 0.59
IFT20-208ENST00000578985 GAKO14976 1311 aa18.72■□□□□ 0.59
IFT20-208ENST00000578985 ERC2O15083 957 aa18.71■□□□□ 0.59
IFT20-208ENST00000578985 HSPA6P17066 643 aa18.71■□□□□ 0.59
IFT20-208ENST00000578985 NAA16Q6N069 864 aaPredicted RBP18.71■□□□□ 0.59
IFT20-208ENST00000578985 DLK2Q6UY11 383 aa18.71■□□□□ 0.59
IFT20-208ENST00000578985 EDC3Q96F86 508 aaKnown RBP18.71■□□□□ 0.59
IFT20-208ENST00000578985 PAG1Q9NWQ8 432 aa18.71■□□□□ 0.59
IFT20-208ENST00000578985 SALL3Q9BXA9 1300 aa18.71■□□□□ 0.59
IFT20-208ENST00000578985 APLP1P51693 650 aa18.7■□□□□ 0.58
IFT20-208ENST00000578985 MAP3K12Q12852 859 aa18.7■□□□□ 0.58
IFT20-208ENST00000578985 TMOD2Q9NZR1 351 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms