RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 FKTNO75072 461 aa11.22□□□□□ -0.61
GGA3-207ENST00000578896 PDE8BO95263 885 aa11.22□□□□□ -0.61
GGA3-207ENST00000578896 COL1A1P02452 1464 aaPredicted RBP11.22□□□□□ -0.61
GGA3-207ENST00000578896 PTPRCP08575 1304 aa11.22□□□□□ -0.61
GGA3-207ENST00000578896 IREB2P48200 963 aaKnown RBP11.22□□□□□ -0.61
GGA3-207ENST00000578896 RFX5P48382 616 aaPredicted RBP11.22□□□□□ -0.61
GGA3-207ENST00000578896 IFNL1Q8IU54 200 aa11.22□□□□□ -0.61
GGA3-207ENST00000578896 TEPSINQ96N21 525 aa11.22□□□□□ -0.61
GGA3-207ENST00000578896 SMC4Q9NTJ3 1288 aa11.22□□□□□ -0.61
GGA3-207ENST00000578896 SERPINA10Q9UK55 444 aa11.22□□□□□ -0.61
GGA3-207ENST00000578896 OTOFQ9HC10 1997 aa11.21□□□□□ -0.61
GGA3-207ENST00000578896 MANSC4A6NHS7 340 aaPredicted RBP11.21□□□□□ -0.61
GGA3-207ENST00000578896 CAVIN4Q5BKX8 364 aa11.21□□□□□ -0.61
GGA3-207ENST00000578896 PTPN18Q99952 460 aa11.21□□□□□ -0.61
GGA3-207ENST00000578896 SIL1Q9H173 461 aa11.21□□□□□ -0.61
GGA3-207ENST00000578896 AK9Q5TCS8 1911 aa11.2□□□□□ -0.62
GGA3-207ENST00000578896 EYA2O00167 538 aa11.2□□□□□ -0.62
GGA3-207ENST00000578896 FGFR2P21802 821 aa11.2□□□□□ -0.62
GGA3-207ENST00000578896 CAP1Q01518 475 aa11.2□□□□□ -0.62
GGA3-207ENST00000578896 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.2□□□□□ -0.62
GGA3-207ENST00000578896 ANKRD13AQ8IZ07 590 aa11.2□□□□□ -0.62
GGA3-207ENST00000578896 OPTNQ96CV9 577 aa11.2□□□□□ -0.62
GGA3-207ENST00000578896 NOB1Q9ULX3 412 aaKnown RBP11.2□□□□□ -0.62
GGA3-207ENST00000578896 HTTP42858 3142 aa11.2□□□□□ -0.62
GGA3-207ENST00000578896 ARAP2Q8WZ64 1704 aa11.19□□□□□ -0.62
GGA3-207ENST00000578896 ZBTB48P10074 688 aaPredicted RBP11.19□□□□□ -0.62
GGA3-207ENST00000578896 CRHR2Q13324 411 aa11.19□□□□□ -0.62
GGA3-207ENST00000578896 TNFAIP1Q13829 316 aa11.19□□□□□ -0.62
GGA3-207ENST00000578896 ATG9AQ7Z3C6 839 aa11.19□□□□□ -0.62
GGA3-207ENST00000578896 PA2G4Q9UQ80 394 aaKnown RBP11.19□□□□□ -0.62
GGA3-207ENST00000578896 TRIM17Q9Y577 477 aa11.19□□□□□ -0.62
GGA3-207ENST00000578896 MKI67P46013 3256 aaKnown RBP11.18□□□□□ -0.62
GGA3-207ENST00000578896 MYH13Q9UKX3 1938 aa11.18□□□□□ -0.62
GGA3-207ENST00000578896 ALDH1A1P00352 501 aa11.18□□□□□ -0.62
GGA3-207ENST00000578896 IFIT1P09914 478 aaKnown RBP11.18□□□□□ -0.62
GGA3-207ENST00000578896 INHBEP58166 350 aa11.18□□□□□ -0.62
GGA3-207ENST00000578896 MAP3K9P80192 1104 aa11.18□□□□□ -0.62
GGA3-207ENST00000578896 VGLL4Q14135 290 aa11.18□□□□□ -0.62
GGA3-207ENST00000578896 PUM3Q15397 648 aaKnown RBP11.18□□□□□ -0.62
GGA3-207ENST00000578896 PKN2Q16513 984 aaKnown RBP11.18□□□□□ -0.62
GGA3-207ENST00000578896 ALDH1L2Q3SY69 923 aa11.18□□□□□ -0.62
GGA3-207ENST00000578896 APOBEC3HQ6NTF7 200 aaKnown RBP11.18□□□□□ -0.62
GGA3-207ENST00000578896 FBXO46Q6PJ61 603 aaPredicted RBP11.18□□□□□ -0.62
GGA3-207ENST00000578896 TRMT2AQ8IZ69 625 aaKnown RBP11.18□□□□□ -0.62
GGA3-207ENST00000578896 CD99L2Q8TCZ2 262 aa11.18□□□□□ -0.62
GGA3-207ENST00000578896 TBC1D22AQ8WUA7 517 aa11.18□□□□□ -0.62
GGA3-207ENST00000578896 BRI3BPQ8WY22 251 aa11.18□□□□□ -0.62
GGA3-207ENST00000578896 TEKT1Q969V4 418 aa11.18□□□□□ -0.62
GGA3-207ENST00000578896 OTUD5Q96G74 571 aa11.18□□□□□ -0.62
GGA3-207ENST00000578896 CFHR5Q9BXR6 569 aa11.18□□□□□ -0.62
GGA3-207ENST00000578896 LRRFIP2Q9Y608 721 aaKnown RBP11.18□□□□□ -0.62
GGA3-207ENST00000578896 ECM2O94769 699 aaPredicted RBP11.17□□□□□ -0.62
GGA3-207ENST00000578896 UBTFL1P0CB47 393 aaPredicted RBP11.17□□□□□ -0.62
GGA3-207ENST00000578896 SLC5A1P13866 664 aa11.17□□□□□ -0.62
GGA3-207ENST00000578896 TNNI2P48788 182 aa11.17□□□□□ -0.62
GGA3-207ENST00000578896 DIXDC1Q155Q3 683 aa11.17□□□□□ -0.62
GGA3-207ENST00000578896 NOM1Q5C9Z4 860 aaKnown RBP11.17□□□□□ -0.62
GGA3-207ENST00000578896 MIGA2Q7L4E1 593 aa11.17□□□□□ -0.62
GGA3-207ENST00000578896 OTOP1Q7RTM1 612 aa11.17□□□□□ -0.62
GGA3-207ENST00000578896 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.17□□□□□ -0.62
GGA3-207ENST00000578896 ZKSCAN4Q969J2 545 aaPredicted RBP11.17□□□□□ -0.62
GGA3-207ENST00000578896 MS4A4AQ96JQ5 239 aa11.17□□□□□ -0.62
GGA3-207ENST00000578896 BRCA2P51587 3418 aa11.16□□□□□ -0.62
GGA3-207ENST00000578896 CCL15-CCL14A0A0B4J2E2 113 aa11.16□□□□□ -0.62
GGA3-207ENST00000578896 ADORA1P30542 326 aa11.16□□□□□ -0.62
GGA3-207ENST00000578896 HDLBPQ00341 1268 aaKnown RBP11.16□□□□□ -0.62
GGA3-207ENST00000578896 CCL15Q16663 113 aa11.16□□□□□ -0.62
GGA3-207ENST00000578896 ATP2B3Q16720 1220 aa11.16□□□□□ -0.62
GGA3-207ENST00000578896 LPIN2Q92539 896 aa11.16□□□□□ -0.62
GGA3-207ENST00000578896 ZDHHC15Q96MV8 337 aa11.16□□□□□ -0.62
GGA3-207ENST00000578896 MEIS3Q99687 375 aa11.16□□□□□ -0.62
GGA3-207ENST00000578896 TNNQ9UQP3 1299 aa11.16□□□□□ -0.62
GGA3-207ENST00000578896 TESPA1A2RU30 521 aaPredicted RBP11.15□□□□□ -0.62
GGA3-207ENST00000578896 UNCXA6NJT0 531 aa11.15□□□□□ -0.62
GGA3-207ENST00000578896 PRDX5P30044 214 aa11.15□□□□□ -0.62
GGA3-207ENST00000578896 PHKA1P46020 1223 aa11.15□□□□□ -0.62
GGA3-207ENST00000578896 TCP10Q12799 353 aa11.15□□□□□ -0.62
GGA3-207ENST00000578896 NFIAQ12857 509 aa11.15□□□□□ -0.62
GGA3-207ENST00000578896 OTUD7BQ6GQQ9 843 aa11.15□□□□□ -0.62
GGA3-207ENST00000578896 FAM43AQ8N2R8 423 aa11.15□□□□□ -0.62
GGA3-207ENST00000578896 WRNIP1Q96S55 665 aa11.15□□□□□ -0.62
GGA3-207ENST00000578896 TMOD2Q9NZR1 351 aa11.15□□□□□ -0.62
GGA3-207ENST00000578896 CEP126Q9P2H0 1117 aa11.15□□□□□ -0.62
GGA3-207ENST00000578896 DAGLAQ9Y4D2 1042 aa11.15□□□□□ -0.62
GGA3-207ENST00000578896 CSADQ9Y600 493 aa11.15□□□□□ -0.62
GGA3-207ENST00000578896 SNCAIPQ9Y6H5 919 aa11.15□□□□□ -0.62
GGA3-207ENST00000578896 CEP290O15078 2479 aa11.15□□□□□ -0.62
GGA3-207ENST00000578896 LAMB1P07942 1786 aa11.14□□□□□ -0.63
GGA3-207ENST00000578896 POTEFA5A3E0 1075 aa11.14□□□□□ -0.63
GGA3-207ENST00000578896 INPP5BP32019 993 aa11.14□□□□□ -0.63
GGA3-207ENST00000578896 RARSP54136 660 aaKnown RBP11.14□□□□□ -0.63
GGA3-207ENST00000578896 TIMM10P62072 90 aa11.14□□□□□ -0.63
GGA3-207ENST00000578896 SP3Q02447 781 aa11.14□□□□□ -0.63
GGA3-207ENST00000578896 TAF1CQ15572 869 aaPredicted RBP11.14□□□□□ -0.63
GGA3-207ENST00000578896 CDC42EP5Q6NZY7 148 aa11.14□□□□□ -0.63
GGA3-207ENST00000578896 HHIPL2Q6UWX4 724 aa11.14□□□□□ -0.63
GGA3-207ENST00000578896 ZFPM1Q8IX07 1006 aa11.14□□□□□ -0.63
GGA3-207ENST00000578896 WDR66Q8TBY9 1149 aa11.14□□□□□ -0.63
GGA3-207ENST00000578896 ERO1AQ96HE7 468 aa11.14□□□□□ -0.63
GGA3-207ENST00000578896 MRIQ9BWK5 157 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms