RNA–Protein interactions for RNA: ENST00000578709.5

ERBB2-209, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 4

Gene ERBB2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-209	ENST00000578709	ASTN2	O75129	1339 aa	Predicted RBP	29.02	■■■□□ 2.24
ERBB2-209	ENST00000578709	SPDYE2B	A6NHP3	402 aa		29.02	■■■□□ 2.24
ERBB2-209	ENST00000578709	IGHD	P01880	384 aa		29.02	■■■□□ 2.24
ERBB2-209	ENST00000578709	SPDYE6	P0CI01	402 aa		29.02	■■■□□ 2.24
ERBB2-209	ENST00000578709	CRK	P46108	304 aa		29.02	■■■□□ 2.24
ERBB2-209	ENST00000578709	SPTY2D1	Q68D10	685 aa	Predicted RBP	29.02	■■■□□ 2.24
ERBB2-209	ENST00000578709	SMC5	Q8IY18	1101 aa		29.01	■■■□□ 2.23
ERBB2-209	ENST00000578709	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	29.01	■■■□□ 2.23
ERBB2-209	ENST00000578709	BCL11A	Q9H165	835 aa		29.01	■■■□□ 2.23
ERBB2-209	ENST00000578709	SNRK	Q9NRH2	765 aa		29.01	■■■□□ 2.23
ERBB2-209	ENST00000578709	GGA3	Q9NZ52	723 aa		29.01	■■■□□ 2.23
ERBB2-209	ENST00000578709	PCDHAC2	Q9Y5I4	1007 aa		29.01	■■■□□ 2.23
ERBB2-209	ENST00000578709	PASK	Q96RG2	1323 aa		29	■■■□□ 2.23
ERBB2-209	ENST00000578709	PITPNM2	Q9BZ72	1349 aa		29	■■■□□ 2.23
ERBB2-209	ENST00000578709	HHIPL2	Q6UWX4	724 aa		29	■■■□□ 2.23
ERBB2-209	ENST00000578709	TEKT1	Q969V4	418 aa		29	■■■□□ 2.23
ERBB2-209	ENST00000578709	ABCF2	Q9UG63	623 aa		29	■■■□□ 2.23
ERBB2-209	ENST00000578709	ECM29	Q5VYK3	1845 aa		28.99	■■■□□ 2.23
ERBB2-209	ENST00000578709	ANGEL2	Q5VTE6	544 aa	Known RBP	28.99	■■■□□ 2.23
ERBB2-209	ENST00000578709	DCPS	Q96C86	337 aa	Known RBP	28.99	■■■□□ 2.23
ERBB2-209	ENST00000578709	PRMT6	Q96LA8	375 aa	Predicted RBP	28.99	■■■□□ 2.23
ERBB2-209	ENST00000578709	CYP2E1	P05181	493 aa	Predicted RBP	28.98	■■■□□ 2.23
ERBB2-209	ENST00000578709	ZAP70	P43403	619 aa		28.98	■■■□□ 2.23
ERBB2-209	ENST00000578709	RBM5	P52756	815 aa	Known RBP eCLIP	28.98	■■■□□ 2.23	2e-9	■■■□□ 18.6
ERBB2-209	ENST00000578709	TBC1D9	Q6ZT07	1266 aa		28.98	■■■□□ 2.23
ERBB2-209	ENST00000578709	CDC37L1	Q7L3B6	337 aa		28.98	■■■□□ 2.23
ERBB2-209	ENST00000578709	ZDHHC15	Q96MV8	337 aa		28.98	■■■□□ 2.23
ERBB2-209	ENST00000578709	ATP5J	P18859	108 aa		28.97	■■■□□ 2.23
ERBB2-209	ENST00000578709	ERICH6	Q7L0X2	663 aa		28.97	■■■□□ 2.23
ERBB2-209	ENST00000578709	GLIS2	Q9BZE0	524 aa	Predicted RBP	28.97	■■■□□ 2.23
ERBB2-209	ENST00000578709	ANKRD45	Q5TZF3	282 aa		28.96	■■■□□ 2.23
ERBB2-209	ENST00000578709	KRT26	Q7Z3Y9	468 aa		28.96	■■■□□ 2.23
ERBB2-209	ENST00000578709	AOX1	Q06278	1338 aa		28.95	■■■□□ 2.23
ERBB2-209	ENST00000578709	MYO1B	O43795	1136 aa		28.95	■■■□□ 2.22
ERBB2-209	ENST00000578709	IGSF3	O75054	1194 aa		28.95	■■■□□ 2.22
ERBB2-209	ENST00000578709	DIXDC1	Q155Q3	683 aa		28.95	■■■□□ 2.22
ERBB2-209	ENST00000578709	DZIP1	Q86YF9	867 aa	Known RBP	28.95	■■■□□ 2.22
ERBB2-209	ENST00000578709	MYH2	Q9UKX2	1941 aa		28.94	■■■□□ 2.22
ERBB2-209	ENST00000578709	APOBEC3H	Q6NTF7	200 aa	Known RBP	28.94	■■■□□ 2.22
ERBB2-209	ENST00000578709	USP48	Q86UV5	1035 aa		28.94	■■■□□ 2.22
ERBB2-209	ENST00000578709	SULF1	Q8IWU6	871 aa		28.94	■■■□□ 2.22
ERBB2-209	ENST00000578709	PIH1D3	Q9NQM4	214 aa	Known RBP	28.94	■■■□□ 2.22
ERBB2-209	ENST00000578709	ECHDC1	Q9NTX5	307 aa		28.94	■■■□□ 2.22
ERBB2-209	ENST00000578709	ZBTB47	Q9UFB7	747 aa	Predicted RBP	28.94	■■■□□ 2.22
ERBB2-209	ENST00000578709	DAGLA	Q9Y4D2	1042 aa		28.94	■■■□□ 2.22
ERBB2-209	ENST00000578709	TRAF5	O00463	557 aa		28.93	■■■□□ 2.22
ERBB2-209	ENST00000578709	HSPA6	P17066	643 aa		28.93	■■■□□ 2.22
ERBB2-209	ENST00000578709	MECOM	Q03112	1051 aa		28.93	■■■□□ 2.22
ERBB2-209	ENST00000578709	SPDYE2	Q495Y8	402 aa		28.93	■■■□□ 2.22
ERBB2-209	ENST00000578709	APOBEC3F	Q8IUX4	373 aa	Known RBP	28.93	■■■□□ 2.22
ERBB2-209	ENST00000578709	ZNF384	Q8TF68	577 aa		28.93	■■■□□ 2.22
ERBB2-209	ENST00000578709	NSUN4	Q96CB9	384 aa	Known RBP	28.93	■■■□□ 2.22
ERBB2-209	ENST00000578709	FAM163A	Q96GL9	167 aa	Predicted RBP	28.93	■■■□□ 2.22
ERBB2-209	ENST00000578709	GPATCH3	Q96I76	525 aa		28.93	■■■□□ 2.22
ERBB2-209	ENST00000578709	LRP2BP	Q9P2M1	347 aa		28.93	■■■□□ 2.22
ERBB2-209	ENST00000578709	NDUFB9	Q9Y6M9	179 aa		28.93	■■■□□ 2.22
ERBB2-209	ENST00000578709	GAK	O14976	1311 aa		28.93	■■■□□ 2.22
ERBB2-209	ENST00000578709	MYO5A	Q9Y4I1	1855 aa	Known RBP	28.92	■■■□□ 2.22
ERBB2-209	ENST00000578709	SLF2	Q8IX21	1173 aa		28.92	■■■□□ 2.22
ERBB2-209	ENST00000578709	RAI14	Q9P0K7	980 aa		28.92	■■■□□ 2.22
ERBB2-209	ENST00000578709	ADM5	C9JUS6	153 aa		28.91	■■■□□ 2.22
ERBB2-209	ENST00000578709	APLP1	P51693	650 aa		28.91	■■■□□ 2.22
ERBB2-209	ENST00000578709	TDRD3	Q9H7E2	651 aa	Known RBP	28.91	■■■□□ 2.22
ERBB2-209	ENST00000578709	ZNF70	Q9UC06	446 aa	Predicted RBP	28.91	■■■□□ 2.22
ERBB2-209	ENST00000578709	TRPM7	Q96QT4	1865 aa		28.91	■■■□□ 2.22
ERBB2-209	ENST00000578709	MAST2	Q6P0Q8	1798 aa		28.9	■■■□□ 2.22
ERBB2-209	ENST00000578709	DOCK2	Q92608	1830 aa		28.9	■■■□□ 2.22
ERBB2-209	ENST00000578709	CLRN2	A0PK11	232 aa		28.9	■■■□□ 2.22
ERBB2-209	ENST00000578709	GSTO1	P78417	241 aa		28.9	■■■□□ 2.22
ERBB2-209	ENST00000578709	NUCB1	Q02818	461 aa		28.9	■■■□□ 2.22
ERBB2-209	ENST00000578709	OTUD7A	Q8TE49	926 aa	Predicted RBP	28.9	■■■□□ 2.22
ERBB2-209	ENST00000578709	HAUS7	Q99871	368 aa		28.9	■■■□□ 2.22
ERBB2-209	ENST00000578709	BOLA2	Q9H3K6	86 aa		28.9	■■■□□ 2.22
ERBB2-209	ENST00000578709	ANTXR1	Q9H6X2	564 aa		28.9	■■■□□ 2.22
ERBB2-209	ENST00000578709	SALL3	Q9BXA9	1300 aa		28.9	■■■□□ 2.22
ERBB2-209	ENST00000578709	FMR1	Q06787	632 aa	Known RBP eCLIP	28.89	■■■□□ 2.22
ERBB2-209	ENST00000578709	TTF1	Q15361	905 aa	Predicted RBP	28.89	■■■□□ 2.22
ERBB2-209	ENST00000578709	TTC41P	Q6P2S7	1318 aa		28.89	■■■□□ 2.21
ERBB2-209	ENST00000578709	DNAJC2	Q99543	621 aa	Known RBP	28.88	■■■□□ 2.21
ERBB2-209	ENST00000578709	MROH7-TTC4	A0A0A0MT08	1334 aa		28.88	■■■□□ 2.21
ERBB2-209	ENST00000578709	LDHC	P07864	332 aa		28.87	■■■□□ 2.21
ERBB2-209	ENST00000578709	MX1	P20591	662 aa		28.87	■■■□□ 2.21
ERBB2-209	ENST00000578709	B4GALNT3	Q6L9W6	998 aa		28.87	■■■□□ 2.21
ERBB2-209	ENST00000578709	DLK2	Q6UY11	383 aa		28.87	■■■□□ 2.21
ERBB2-209	ENST00000578709	CHD1L	Q86WJ1	897 aa		28.87	■■■□□ 2.21
ERBB2-209	ENST00000578709	SCAF8	Q9UPN6	1271 aa	Known RBP	28.87	■■■□□ 2.21
ERBB2-209	ENST00000578709	GOLIM4	O00461	696 aa		28.86	■■■□□ 2.21
ERBB2-209	ENST00000578709	TMED8	Q6PL24	325 aa	Predicted RBP	28.86	■■■□□ 2.21
ERBB2-209	ENST00000578709	LNPK	Q9C0E8	428 aa		28.86	■■■□□ 2.21
ERBB2-209	ENST00000578709	VEZT	Q9HBM0	779 aa		28.86	■■■□□ 2.21
ERBB2-209	ENST00000578709	PAG1	Q9NWQ8	432 aa		28.86	■■■□□ 2.21
ERBB2-209	ENST00000578709	GPR75-ASB3	A0A0A6YYF3	556 aa		28.85	■■■□□ 2.21
ERBB2-209	ENST00000578709	IDH1	O75874	414 aa	Known RBP	28.85	■■■□□ 2.21
ERBB2-209	ENST00000578709	NEFL	P07196	543 aa		28.85	■■■□□ 2.21
ERBB2-209	ENST00000578709	TNFAIP1	Q13829	316 aa		28.85	■■■□□ 2.21
ERBB2-209	ENST00000578709	FKBP1C	Q5VVH2	108 aa		28.85	■■■□□ 2.21
ERBB2-209	ENST00000578709	TSHZ3	Q63HK5	1081 aa		28.85	■■■□□ 2.21
ERBB2-209	ENST00000578709	NAA16	Q6N069	864 aa	Predicted RBP	28.85	■■■□□ 2.21
ERBB2-209	ENST00000578709	CDC42EP5	Q6NZY7	148 aa		28.85	■■■□□ 2.21
ERBB2-209	ENST00000578709	CDCA5	Q96FF9	252 aa		28.85	■■■□□ 2.21

Retrieved 100 of 20,778 RNA–protein pairs in 99 ms