RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 GNL3LQ9NVN8 582 aaKnown RBP16.89■□□□□ 0.29
CSNK1D-208ENST00000578501 SERPINA10Q9UK55 444 aa16.89■□□□□ 0.29
CSNK1D-208ENST00000578501 IQSEC3Q9UPP2 1182 aaPredicted RBP16.89■□□□□ 0.29
CSNK1D-208ENST00000578501 POLR2AP24928 1970 aaKnown RBP16.88■□□□□ 0.29
CSNK1D-208ENST00000578501 F8W031 263 aaPredicted RBP16.88■□□□□ 0.29
CSNK1D-208ENST00000578501 SEMA3EO15041 775 aa16.88■□□□□ 0.29
CSNK1D-208ENST00000578501 TFCP2Q12800 502 aa16.88■□□□□ 0.29
CSNK1D-208ENST00000578501 PKN2Q16513 984 aaKnown RBP16.88■□□□□ 0.29
CSNK1D-208ENST00000578501 APOBEC3FQ8IUX4 373 aaKnown RBP16.88■□□□□ 0.29
CSNK1D-208ENST00000578501 MRIQ9BWK5 157 aa16.88■□□□□ 0.29
CSNK1D-208ENST00000578501 C1orf115Q9H7X2 142 aa16.88■□□□□ 0.29
CSNK1D-208ENST00000578501 DDX19BQ9UMR2 479 aa16.88■□□□□ 0.29
CSNK1D-208ENST00000578501 TTF2Q9UNY4 1162 aaKnown RBP16.88■□□□□ 0.29
CSNK1D-208ENST00000578501 NOP58Q9Y2X3 529 aaKnown RBP16.88■□□□□ 0.29
CSNK1D-208ENST00000578501 SPDYE2BA6NHP3 402 aa16.87■□□□□ 0.29
CSNK1D-208ENST00000578501 SPDYE6P0CI01 402 aa16.87■□□□□ 0.29
CSNK1D-208ENST00000578501 TIMM10P62072 90 aa16.87■□□□□ 0.29
CSNK1D-208ENST00000578501 HDLBPQ00341 1268 aaKnown RBP16.87■□□□□ 0.29
CSNK1D-208ENST00000578501 CHAF1AQ13111 956 aaPredicted RBP16.87■□□□□ 0.29
CSNK1D-208ENST00000578501 CFAP100Q494V2 611 aa16.87■□□□□ 0.29
CSNK1D-208ENST00000578501 CEP85Q6P2H3 762 aa16.87■□□□□ 0.29
CSNK1D-208ENST00000578501 DLK2Q6UY11 383 aa16.87■□□□□ 0.29
CSNK1D-208ENST00000578501 WDR66Q8TBY9 1149 aa16.87■□□□□ 0.29
CSNK1D-208ENST00000578501 GCC1Q96CN9 775 aa16.87■□□□□ 0.29
CSNK1D-208ENST00000578501 CDCA5Q96FF9 252 aa16.87■□□□□ 0.29
CSNK1D-208ENST00000578501 A0A1B0GUL7 405 aa16.86■□□□□ 0.29
CSNK1D-208ENST00000578501 MYO1BO43795 1136 aa16.86■□□□□ 0.29
CSNK1D-208ENST00000578501 PRMT6Q96LA8 375 aaPredicted RBP16.86■□□□□ 0.29
CSNK1D-208ENST00000578501 ZBTB40Q9NUA8 1239 aa16.86■□□□□ 0.29
CSNK1D-208ENST00000578501 DENND2AQ9ULE3 1009 aa16.86■□□□□ 0.29
CSNK1D-208ENST00000578501 COG6Q9Y2V7 657 aa16.86■□□□□ 0.29
CSNK1D-208ENST00000578501 ARAP2Q8WZ64 1704 aa16.86■□□□□ 0.29
CSNK1D-208ENST00000578501 SLC10A3P09131 477 aa16.85■□□□□ 0.29
CSNK1D-208ENST00000578501 ADORA1P30542 326 aa16.85■□□□□ 0.29
CSNK1D-208ENST00000578501 PHKA1P46020 1223 aa16.85■□□□□ 0.29
CSNK1D-208ENST00000578501 CCDC102BQ68D86 513 aa16.85■□□□□ 0.29
CSNK1D-208ENST00000578501 XAGE2Q96GT9 111 aa16.85■□□□□ 0.29
CSNK1D-208ENST00000578501 CSRNP1Q96S65 589 aa16.85■□□□□ 0.29
CSNK1D-208ENST00000578501 GPR108Q9NPR9 543 aa16.85■□□□□ 0.29
CSNK1D-208ENST00000578501 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.85■□□□□ 0.29
CSNK1D-208ENST00000578501 SURF6O75683 361 aaKnown RBP16.84■□□□□ 0.29
CSNK1D-208ENST00000578501 CRKP46108 304 aa16.84■□□□□ 0.29
CSNK1D-208ENST00000578501 RBM5P52756 815 aaKnown RBP eCLIP16.84■□□□□ 0.29
CSNK1D-208ENST00000578501 FKBP1BP68106 108 aa16.84■□□□□ 0.29
CSNK1D-208ENST00000578501 GRIK5Q16478 980 aa16.84■□□□□ 0.29
CSNK1D-208ENST00000578501 HPS5Q9UPZ3 1129 aa16.84■□□□□ 0.29
CSNK1D-208ENST00000578501 PCDHAC2Q9Y5I4 1007 aa16.84■□□□□ 0.29
CSNK1D-208ENST00000578501 MAST3O60307 1309 aa16.84■□□□□ 0.29
CSNK1D-208ENST00000578501 PDS5AQ29RF7 1337 aaKnown RBP16.84■□□□□ 0.29
CSNK1D-208ENST00000578501 SALL1Q9NSC2 1324 aa16.84■□□□□ 0.29
CSNK1D-208ENST00000578501 COL1A1P02452 1464 aaPredicted RBP16.84■□□□□ 0.29
CSNK1D-208ENST00000578501 RPAP2Q8IXW5 612 aaPredicted RBP16.83■□□□□ 0.28
CSNK1D-208ENST00000578501 PPP2R3BQ9Y5P8 575 aa16.83■□□□□ 0.28
CSNK1D-208ENST00000578501 TNRC18O15417 2968 aaPredicted RBP16.83■□□□□ 0.28
CSNK1D-208ENST00000578501 OS9Q13438 667 aaPredicted RBP16.82■□□□□ 0.28
CSNK1D-208ENST00000578501 SPDYE2Q495Y8 402 aa16.82■□□□□ 0.28
CSNK1D-208ENST00000578501 HHIPL2Q6UWX4 724 aa16.82■□□□□ 0.28
CSNK1D-208ENST00000578501 ZGPATQ8N5A5 531 aaKnown RBP16.82■□□□□ 0.28
CSNK1D-208ENST00000578501 TEKT1Q969V4 418 aa16.82■□□□□ 0.28
CSNK1D-208ENST00000578501 ZDHHC15Q96MV8 337 aa16.82■□□□□ 0.28
CSNK1D-208ENST00000578501 NEUROD6Q96NK8 337 aa16.82■□□□□ 0.28
CSNK1D-208ENST00000578501 DEFB129Q9H1M3 183 aa16.82■□□□□ 0.28
CSNK1D-208ENST00000578501 SCAF8Q9UPN6 1271 aaKnown RBP16.82■□□□□ 0.28
CSNK1D-208ENST00000578501 AKAP11Q9UKA4 1901 aa16.82■□□□□ 0.28
CSNK1D-208ENST00000578501 NF2P35240 595 aa16.81■□□□□ 0.28
CSNK1D-208ENST00000578501 RASGRF1Q13972 1273 aa16.81■□□□□ 0.28
CSNK1D-208ENST00000578501 C20orf194Q5TEA3 1177 aa16.81■□□□□ 0.28
CSNK1D-208ENST00000578501 ECM29Q5VYK3 1845 aa16.8■□□□□ 0.28
CSNK1D-208ENST00000578501 AOX1Q06278 1338 aa16.8■□□□□ 0.28
CSNK1D-208ENST00000578501 CLRN2A0PK11 232 aa16.8■□□□□ 0.28
CSNK1D-208ENST00000578501 TNFAIP1Q13829 316 aa16.8■□□□□ 0.28
CSNK1D-208ENST00000578501 HSP90AB4PQ58FF6 505 aa16.8■□□□□ 0.28
CSNK1D-208ENST00000578501 TNNI3KQ59H18 835 aa16.8■□□□□ 0.28
CSNK1D-208ENST00000578501 GORABQ5T7V8 394 aa16.8■□□□□ 0.28
CSNK1D-208ENST00000578501 PRAMEF18Q5VWM3 479 aa16.8■□□□□ 0.28
CSNK1D-208ENST00000578501 ERC1Q8IUD2 1116 aa16.8■□□□□ 0.28
CSNK1D-208ENST00000578501 ZNF70Q9UC06 446 aaPredicted RBP16.8■□□□□ 0.28
CSNK1D-208ENST00000578501 FPGT-TNNI3KV9GXZ4 949 aa16.8■□□□□ 0.28
CSNK1D-208ENST00000578501 PAPPA2Q9BXP8 1791 aa16.79■□□□□ 0.28
CSNK1D-208ENST00000578501 MYH13Q9UKX3 1938 aa16.79■□□□□ 0.28
CSNK1D-208ENST00000578501 HMMRO75330 724 aa16.79■□□□□ 0.28
CSNK1D-208ENST00000578501 LDHBP07195 334 aaKnown RBP16.79■□□□□ 0.28
CSNK1D-208ENST00000578501 ARID4AP29374 1257 aaPredicted RBP16.79■□□□□ 0.28
CSNK1D-208ENST00000578501 APOBEC3HQ6NTF7 200 aaKnown RBP16.79■□□□□ 0.28
CSNK1D-208ENST00000578501 YTHDC1Q96MU7 727 aaKnown RBP16.79■□□□□ 0.28
CSNK1D-208ENST00000578501 TDRD3Q9H7E2 651 aaKnown RBP16.79■□□□□ 0.28
CSNK1D-208ENST00000578501 VEZTQ9HBM0 779 aa16.79■□□□□ 0.28
CSNK1D-208ENST00000578501 UQCRFS1P1P0C7P4 283 aa16.78■□□□□ 0.28
CSNK1D-208ENST00000578501 PRDX5P30044 214 aa16.78■□□□□ 0.28
CSNK1D-208ENST00000578501 SIRT2Q8IXJ6 389 aa16.78■□□□□ 0.28
CSNK1D-208ENST00000578501 RASA3Q14644 834 aa16.77■□□□□ 0.28
CSNK1D-208ENST00000578501 SUPT20HL1Q3ZLR7 823 aa16.77■□□□□ 0.28
CSNK1D-208ENST00000578501 NOM1Q5C9Z4 860 aaKnown RBP16.77■□□□□ 0.28
CSNK1D-208ENST00000578501 FKBP1CQ5VVH2 108 aa16.77■□□□□ 0.28
CSNK1D-208ENST00000578501 SPTY2D1Q68D10 685 aaPredicted RBP16.77■□□□□ 0.28
CSNK1D-208ENST00000578501 RASAL3Q86YV0 1011 aa16.77■□□□□ 0.28
CSNK1D-208ENST00000578501 ZNF512BQ96KM6 892 aaPredicted RBP16.77■□□□□ 0.28
CSNK1D-208ENST00000578501 HMG20BQ9P0W2 317 aa16.77■□□□□ 0.28
CSNK1D-208ENST00000578501 TNNI2P48788 182 aa16.76■□□□□ 0.27
CSNK1D-208ENST00000578501 CCDC158Q5M9N0 1113 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms