RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 CNTNAP1P78357 1384 aa28.41■■■□□ 2.14
LIMD2-204ENST00000578297 ZGPATQ8N5A5 531 aaKnown RBP28.41■■■□□ 2.14
LIMD2-204ENST00000578297 RHPN1Q8TCX5 695 aa28.41■■■□□ 2.14
LIMD2-204ENST00000578297 TEKT1Q969V4 418 aa28.41■■■□□ 2.14
LIMD2-204ENST00000578297 EAF2Q96CJ1 260 aaPredicted RBP28.41■■■□□ 2.14
LIMD2-204ENST00000578297 DBNDD2Q9BQY9 259 aa28.41■■■□□ 2.14
LIMD2-204ENST00000578297 SCAF8Q9UPN6 1271 aaKnown RBP28.41■■■□□ 2.14
LIMD2-204ENST00000578297 TLL2Q9Y6L7 1015 aa28.41■■■□□ 2.14
LIMD2-204ENST00000578297 RASSF10A6NK89 507 aa28.4■■■□□ 2.14
LIMD2-204ENST00000578297 UQCRFS1P1P0C7P4 283 aa28.4■■■□□ 2.14
LIMD2-204ENST00000578297 CCDC158Q5M9N0 1113 aa28.4■■■□□ 2.14
LIMD2-204ENST00000578297 RAB11FIP3O75154 756 aa28.39■■■□□ 2.14
LIMD2-204ENST00000578297 LDHBP07195 334 aaKnown RBP28.39■■■□□ 2.14
LIMD2-204ENST00000578297 PRDX5P30044 214 aa28.39■■■□□ 2.14
LIMD2-204ENST00000578297 HHIPL2Q6UWX4 724 aa28.39■■■□□ 2.14
LIMD2-204ENST00000578297 KIF1BPQ96EK5 621 aa28.39■■■□□ 2.14
LIMD2-204ENST00000578297 ZDHHC15Q96MV8 337 aa28.39■■■□□ 2.14
LIMD2-204ENST00000578297 HMG20BQ9P0W2 317 aa28.39■■■□□ 2.14
LIMD2-204ENST00000578297 MKRN1Q9UHC7 482 aaKnown RBP28.39■■■□□ 2.14
LIMD2-204ENST00000578297 AOX1Q06278 1338 aa28.39■■■□□ 2.13
LIMD2-204ENST00000578297 DEFB115Q30KQ5 88 aa28.38■■■□□ 2.13
LIMD2-204ENST00000578297 SAPCD2Q86UD0 394 aa28.38■■■□□ 2.13
LIMD2-204ENST00000578297 SPATA5Q8NB90 893 aa28.38■■■□□ 2.13
LIMD2-204ENST00000578297 DBNLQ9UJU6 430 aaKnown RBP28.38■■■□□ 2.13
LIMD2-204ENST00000578297 CLRN2A0PK11 232 aa28.37■■■□□ 2.13
LIMD2-204ENST00000578297 SPDYE2Q495Y8 402 aa28.37■■■□□ 2.13
LIMD2-204ENST00000578297 TTC39AQ5SRH9 613 aa28.37■■■□□ 2.13
LIMD2-204ENST00000578297 ZNF512BQ96KM6 892 aaPredicted RBP28.37■■■□□ 2.13
LIMD2-204ENST00000578297 CRBNQ96SW2 442 aa28.37■■■□□ 2.13
LIMD2-204ENST00000578297 CCDC8Q9H0W5 538 aaPredicted RBP28.37■■■□□ 2.13
LIMD2-204ENST00000578297 TDRD3Q9H7E2 651 aaKnown RBP28.37■■■□□ 2.13
LIMD2-204ENST00000578297 MCAMP43121 646 aa28.36■■■□□ 2.13
LIMD2-204ENST00000578297 JMYQ8N9B5 988 aa28.36■■■□□ 2.13
LIMD2-204ENST00000578297 DEFB129Q9H1M3 183 aa28.36■■■□□ 2.13
LIMD2-204ENST00000578297 GBA2Q9HCG7 927 aaPredicted RBP28.36■■■□□ 2.13
LIMD2-204ENST00000578297 TLR7Q9NYK1 1049 aaKnown RBP28.36■■■□□ 2.13
LIMD2-204ENST00000578297 ZNF70Q9UC06 446 aaPredicted RBP28.36■■■□□ 2.13
LIMD2-204ENST00000578297 SPTY2D1Q68D10 685 aaPredicted RBP28.35■■■□□ 2.13
LIMD2-204ENST00000578297 AACSQ86V21 672 aa28.35■■■□□ 2.13
LIMD2-204ENST00000578297 C2orf69Q8N8R5 385 aa28.35■■■□□ 2.13
LIMD2-204ENST00000578297 HHIPL1Q96JK4 782 aa28.35■■■□□ 2.13
LIMD2-204ENST00000578297 VEZTQ9HBM0 779 aa28.35■■■□□ 2.13
LIMD2-204ENST00000578297 IL1RAPL2Q9NP60 686 aa28.35■■■□□ 2.13
LIMD2-204ENST00000578297 ABCF2Q9UG63 623 aa28.35■■■□□ 2.13
LIMD2-204ENST00000578297 PPP2R3BQ9Y5P8 575 aa28.35■■■□□ 2.13
LIMD2-204ENST00000578297 APBB1O00213 710 aa28.34■■■□□ 2.13
LIMD2-204ENST00000578297 PRAMEF18Q5VWM3 479 aa28.34■■■□□ 2.13
LIMD2-204ENST00000578297 APOBEC3HQ6NTF7 200 aaKnown RBP28.34■■■□□ 2.13
LIMD2-204ENST00000578297 PI16Q6UXB8 463 aa28.34■■■□□ 2.13
LIMD2-204ENST00000578297 CLASRPQ8N2M8 674 aaKnown RBP28.34■■■□□ 2.13
LIMD2-204ENST00000578297 PCDHB15Q9Y5E8 787 aa28.33■■■□□ 2.13
LIMD2-204ENST00000578297 VEGFBP49765 207 aa28.32■■■□□ 2.12
LIMD2-204ENST00000578297 TNFAIP1Q13829 316 aa28.32■■■□□ 2.12
LIMD2-204ENST00000578297 DIXDC1Q155Q3 683 aa28.32■■■□□ 2.12
LIMD2-204ENST00000578297 FKBP1BP68106 108 aa28.31■■■□□ 2.12
LIMD2-204ENST00000578297 ERICH6Q7L0X2 663 aa28.31■■■□□ 2.12
LIMD2-204ENST00000578297 DAGLAQ9Y4D2 1042 aa28.31■■■□□ 2.12
LIMD2-204ENST00000578297 AKAP11Q9UKA4 1901 aa28.31■■■□□ 2.12
LIMD2-204ENST00000578297 PCNTO95613 3336 aa28.3■■■□□ 2.12
LIMD2-204ENST00000578297 NF2P35240 595 aa28.3■■■□□ 2.12
LIMD2-204ENST00000578297 HUNKP57058 714 aa28.3■■■□□ 2.12
LIMD2-204ENST00000578297 DZIP1Q86YF9 867 aaKnown RBP28.3■■■□□ 2.12
LIMD2-204ENST00000578297 DCTPP1Q9H773 170 aa28.3■■■□□ 2.12
LIMD2-204ENST00000578297 RASA3Q14644 834 aa28.29■■■□□ 2.12
LIMD2-204ENST00000578297 TBC1D9Q6ZT07 1266 aa28.29■■■□□ 2.12
LIMD2-204ENST00000578297 SLF2Q8IX21 1173 aa28.29■■■□□ 2.12
LIMD2-204ENST00000578297 FAM163AQ96GL9 167 aaPredicted RBP28.29■■■□□ 2.12
LIMD2-204ENST00000578297 SNRKQ9NRH2 765 aa28.29■■■□□ 2.12
LIMD2-204ENST00000578297 SUPT16HQ9Y5B9 1047 aaKnown RBP28.29■■■□□ 2.12
LIMD2-204ENST00000578297 WDR33Q9C0J8 1336 aaKnown RBP28.28■■■□□ 2.12
LIMD2-204ENST00000578297 IFIT2P09913 472 aaKnown RBP28.28■■■□□ 2.12
LIMD2-204ENST00000578297 ECE1P42892 770 aa28.28■■■□□ 2.12
LIMD2-204ENST00000578297 AAMPQ13685 434 aa28.28■■■□□ 2.12
LIMD2-204ENST00000578297 LRRCC1Q9C099 1032 aa28.28■■■□□ 2.12
LIMD2-204ENST00000578297 TMOD2Q9NZR1 351 aa28.28■■■□□ 2.12
LIMD2-204ENST00000578297 PAPPA2Q9BXP8 1791 aa28.28■■■□□ 2.12
LIMD2-204ENST00000578297 MYH2Q9UKX2 1941 aa28.28■■■□□ 2.12
LIMD2-204ENST00000578297 GAKO14976 1311 aa28.27■■■□□ 2.12
LIMD2-204ENST00000578297 TCP10L2B9ZVM9 353 aa28.27■■■□□ 2.12
LIMD2-204ENST00000578297 TNNI2P48788 182 aa28.27■■■□□ 2.12
LIMD2-204ENST00000578297 MECOMQ03112 1051 aa28.27■■■□□ 2.12
LIMD2-204ENST00000578297 FKBP1CQ5VVH2 108 aa28.27■■■□□ 2.12
LIMD2-204ENST00000578297 CYP4F22Q6NT55 531 aa28.27■■■□□ 2.12
LIMD2-204ENST00000578297 PAXIP1Q6ZW49 1069 aaPredicted RBP28.27■■■□□ 2.12
LIMD2-204ENST00000578297 CAPNS2Q96L46 248 aa28.27■■■□□ 2.12
LIMD2-204ENST00000578297 CYP2E1P05181 493 aaPredicted RBP28.26■■■□□ 2.11
LIMD2-204ENST00000578297 SUPT20HL1Q3ZLR7 823 aa28.26■■■□□ 2.11
LIMD2-204ENST00000578297 ZAP70P43403 619 aa28.25■■■□□ 2.11
LIMD2-204ENST00000578297 CDC42EP5Q6NZY7 148 aa28.25■■■□□ 2.11
LIMD2-204ENST00000578297 ZNF384Q8TF68 577 aa28.25■■■□□ 2.11
LIMD2-204ENST00000578297 NSUN4Q96CB9 384 aaKnown RBP28.25■■■□□ 2.11
LIMD2-204ENST00000578297 RAI14Q9P0K7 980 aa28.25■■■□□ 2.11
LIMD2-204ENST00000578297 LRP2BPQ9P2M1 347 aa28.25■■■□□ 2.11
LIMD2-204ENST00000578297 IGSF3O75054 1194 aa28.24■■■□□ 2.11
LIMD2-204ENST00000578297 CACNB3P54284 484 aa28.24■■■□□ 2.11
LIMD2-204ENST00000578297 GSTO1P78417 241 aa28.24■■■□□ 2.11
LIMD2-204ENST00000578297 RGMBQ6NW40 437 aa28.24■■■□□ 2.11
LIMD2-204ENST00000578297 FAM83AQ86UY5 434 aa28.24■■■□□ 2.11
LIMD2-204ENST00000578297 MROH7-TTC4A0A0A0MT08 1334 aa28.23■■■□□ 2.11
LIMD2-204ENST00000578297 NBPF12Q5TAG4 269 aaPredicted RBP28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms