RNA–Protein interactions for RNA: ENST00000578148.1

RAB11FIP4-202, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 3

Gene RAB11FIP4, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-202ENST00000578148 PUS3Q9BZE2 481 aaKnown RBP11.18□□□□□ -0.62
RAB11FIP4-202ENST00000578148 RIPOR2Q9Y4F9 1068 aa11.18□□□□□ -0.62
RAB11FIP4-202ENST00000578148 RBBP6Q7Z6E9 1792 aaKnown RBP11.18□□□□□ -0.62
RAB11FIP4-202ENST00000578148 PTPRCP08575 1304 aa11.17□□□□□ -0.62
RAB11FIP4-202ENST00000578148 GJA5P36382 358 aa11.17□□□□□ -0.62
RAB11FIP4-202ENST00000578148 PRPF38BQ5VTL8 546 aaKnown RBP11.17□□□□□ -0.62
RAB11FIP4-202ENST00000578148 DZIP1LQ8IYY4 767 aaKnown RBP11.17□□□□□ -0.62
RAB11FIP4-202ENST00000578148 FAM9BQ8IZU0 186 aa11.17□□□□□ -0.62
RAB11FIP4-202ENST00000578148 ANKRD44Q8N8A2 993 aa11.17□□□□□ -0.62
RAB11FIP4-202ENST00000578148 BICC1Q9H694 974 aaKnown RBP11.17□□□□□ -0.62
RAB11FIP4-202ENST00000578148 ZNF70Q9UC06 446 aaPredicted RBP11.17□□□□□ -0.62
RAB11FIP4-202ENST00000578148 CENPFP49454 3210 aa11.17□□□□□ -0.62
RAB11FIP4-202ENST00000578148 KIF16BQ96L93 1317 aa11.16□□□□□ -0.62
RAB11FIP4-202ENST00000578148 TESPA1A2RU30 521 aaPredicted RBP11.16□□□□□ -0.62
RAB11FIP4-202ENST00000578148 USP2O75604 605 aaPredicted RBP11.16□□□□□ -0.62
RAB11FIP4-202ENST00000578148 CRKP46108 304 aa11.16□□□□□ -0.62
RAB11FIP4-202ENST00000578148 HDLBPQ00341 1268 aaKnown RBP11.16□□□□□ -0.62
RAB11FIP4-202ENST00000578148 OTUD7BQ6GQQ9 843 aa11.16□□□□□ -0.62
RAB11FIP4-202ENST00000578148 FBXO33Q7Z6M2 555 aa11.16□□□□□ -0.62
RAB11FIP4-202ENST00000578148 VPS37DQ86XT2 251 aa11.16□□□□□ -0.62
RAB11FIP4-202ENST00000578148 VGLL2Q8N8G2 317 aa11.16□□□□□ -0.62
RAB11FIP4-202ENST00000578148 TBC1D22AQ8WUA7 517 aa11.16□□□□□ -0.62
RAB11FIP4-202ENST00000578148 TEPSINQ96N21 525 aa11.16□□□□□ -0.62
RAB11FIP4-202ENST00000578148 TDRD3Q9H7E2 651 aaKnown RBP11.16□□□□□ -0.62
RAB11FIP4-202ENST00000578148 TRIM17Q9Y577 477 aa11.16□□□□□ -0.62
RAB11FIP4-202ENST00000578148 MKI67P46013 3256 aaKnown RBP11.15□□□□□ -0.62
RAB11FIP4-202ENST00000578148 TNNI2P48788 182 aa11.15□□□□□ -0.62
RAB11FIP4-202ENST00000578148 CRHR2Q13324 411 aa11.15□□□□□ -0.62
RAB11FIP4-202ENST00000578148 LRRC24Q50LG9 513 aa11.15□□□□□ -0.62
RAB11FIP4-202ENST00000578148 METTL24Q5JXM2 366 aa11.15□□□□□ -0.62
RAB11FIP4-202ENST00000578148 OTOP1Q7RTM1 612 aa11.15□□□□□ -0.62
RAB11FIP4-202ENST00000578148 MRPL50Q8N5N7 158 aaKnown RBP11.15□□□□□ -0.62
RAB11FIP4-202ENST00000578148 OPTNQ96CV9 577 aa11.15□□□□□ -0.62
RAB11FIP4-202ENST00000578148 ERO1AQ96HE7 468 aa11.15□□□□□ -0.62
RAB11FIP4-202ENST00000578148 RPAP1Q9BWH6 1393 aaPredicted RBP11.15□□□□□ -0.63
RAB11FIP4-202ENST00000578148 BRCA2P51587 3418 aa11.15□□□□□ -0.63
RAB11FIP4-202ENST00000578148 MAST3O60307 1309 aa11.14□□□□□ -0.63
RAB11FIP4-202ENST00000578148 TCP10L2B9ZVM9 353 aa11.14□□□□□ -0.63
RAB11FIP4-202ENST00000578148 PDE8BO95263 885 aa11.14□□□□□ -0.63
RAB11FIP4-202ENST00000578148 CHAF1AQ13111 956 aaPredicted RBP11.14□□□□□ -0.63
RAB11FIP4-202ENST00000578148 CAVIN4Q5BKX8 364 aa11.14□□□□□ -0.63
RAB11FIP4-202ENST00000578148 CDAN1Q8IWY9 1227 aa11.14□□□□□ -0.63
RAB11FIP4-202ENST00000578148 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.14□□□□□ -0.63
RAB11FIP4-202ENST00000578148 TEKT1Q969V4 418 aa11.14□□□□□ -0.63
RAB11FIP4-202ENST00000578148 TMEM39BQ9GZU3 492 aa11.14□□□□□ -0.63
RAB11FIP4-202ENST00000578148 ELP3Q9H9T3 547 aa11.14□□□□□ -0.63
RAB11FIP4-202ENST00000578148 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.14□□□□□ -0.63
RAB11FIP4-202ENST00000578148 SUGT1Q9Y2Z0 365 aa11.14□□□□□ -0.63
RAB11FIP4-202ENST00000578148 E9PSI1 815 aa11.13□□□□□ -0.63
RAB11FIP4-202ENST00000578148 FRAT2O75474 233 aaPredicted RBP11.13□□□□□ -0.63
RAB11FIP4-202ENST00000578148 VGLL4Q14135 290 aa11.13□□□□□ -0.63
RAB11FIP4-202ENST00000578148 PUM3Q15397 648 aaKnown RBP11.13□□□□□ -0.63
RAB11FIP4-202ENST00000578148 GRIK5Q16478 980 aa11.13□□□□□ -0.63
RAB11FIP4-202ENST00000578148 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.13□□□□□ -0.63
RAB11FIP4-202ENST00000578148 MS4A4AQ96JQ5 239 aa11.13□□□□□ -0.63
RAB11FIP4-202ENST00000578148 PTPN18Q99952 460 aa11.13□□□□□ -0.63
RAB11FIP4-202ENST00000578148 TMOD2Q9NZR1 351 aa11.13□□□□□ -0.63
RAB11FIP4-202ENST00000578148 IQSEC3Q9UPP2 1182 aaPredicted RBP11.13□□□□□ -0.63
RAB11FIP4-202ENST00000578148 CSADQ9Y600 493 aa11.13□□□□□ -0.63
RAB11FIP4-202ENST00000578148 IFIT1P09914 478 aaKnown RBP11.12□□□□□ -0.63
RAB11FIP4-202ENST00000578148 FGFR2P21802 821 aa11.12□□□□□ -0.63
RAB11FIP4-202ENST00000578148 GTF2A2P52657 109 aa11.12□□□□□ -0.63
RAB11FIP4-202ENST00000578148 MAP3K9P80192 1104 aa11.12□□□□□ -0.63
RAB11FIP4-202ENST00000578148 SP3Q02447 781 aa11.12□□□□□ -0.63
RAB11FIP4-202ENST00000578148 FKBP1CQ5VVH2 108 aa11.12□□□□□ -0.63
RAB11FIP4-202ENST00000578148 INTS3Q68E01 1043 aaKnown RBP11.12□□□□□ -0.63
RAB11FIP4-202ENST00000578148 FAM83AQ86UY5 434 aa11.12□□□□□ -0.63
RAB11FIP4-202ENST00000578148 KLHDC4Q8TBB5 520 aa11.12□□□□□ -0.63
RAB11FIP4-202ENST00000578148 CD99L2Q8TCZ2 262 aa11.12□□□□□ -0.63
RAB11FIP4-202ENST00000578148 BRI3BPQ8WY22 251 aa11.12□□□□□ -0.63
RAB11FIP4-202ENST00000578148 SSH1Q8WYL5 1049 aa11.12□□□□□ -0.63
RAB11FIP4-202ENST00000578148 ZDHHC15Q96MV8 337 aa11.12□□□□□ -0.63
RAB11FIP4-202ENST00000578148 MRIQ9BWK5 157 aa11.12□□□□□ -0.63
RAB11FIP4-202ENST00000578148 USP44Q9H0E7 712 aa11.12□□□□□ -0.63
RAB11FIP4-202ENST00000578148 PTPN22Q9Y2R2 807 aa11.12□□□□□ -0.63
RAB11FIP4-202ENST00000578148 CCL15-CCL14A0A0B4J2E2 113 aa11.11□□□□□ -0.63
RAB11FIP4-202ENST00000578148 SPDYE5A6NIY4 337 aa11.11□□□□□ -0.63
RAB11FIP4-202ENST00000578148 EYA2O00167 538 aa11.11□□□□□ -0.63
RAB11FIP4-202ENST00000578148 BCAMP50895 628 aa11.11□□□□□ -0.63
RAB11FIP4-202ENST00000578148 CCL15Q16663 113 aa11.11□□□□□ -0.63
RAB11FIP4-202ENST00000578148 ARMC5Q96C12 935 aa11.11□□□□□ -0.63
RAB11FIP4-202ENST00000578148 HOOK2Q96ED9 719 aa11.11□□□□□ -0.63
RAB11FIP4-202ENST00000578148 EFCC1Q9HA90 598 aa11.11□□□□□ -0.63
RAB11FIP4-202ENST00000578148 CEP290O15078 2479 aa11.1□□□□□ -0.63
RAB11FIP4-202ENST00000578148 SLC5A1P13866 664 aa11.1□□□□□ -0.63
RAB11FIP4-202ENST00000578148 RFX5P48382 616 aaPredicted RBP11.1□□□□□ -0.63
RAB11FIP4-202ENST00000578148 CACNB3P54284 484 aa11.1□□□□□ -0.63
RAB11FIP4-202ENST00000578148 TAF1CQ15572 869 aaPredicted RBP11.1□□□□□ -0.63
RAB11FIP4-202ENST00000578148 ALDH1L2Q3SY69 923 aa11.1□□□□□ -0.63
RAB11FIP4-202ENST00000578148 APOBEC3HQ6NTF7 200 aaKnown RBP11.1□□□□□ -0.63
RAB11FIP4-202ENST00000578148 HHIPL2Q6UWX4 724 aa11.1□□□□□ -0.63
RAB11FIP4-202ENST00000578148 LPIN2Q92539 896 aa11.1□□□□□ -0.63
RAB11FIP4-202ENST00000578148 OTUD5Q96G74 571 aa11.1□□□□□ -0.63
RAB11FIP4-202ENST00000578148 WRNIP1Q96S55 665 aa11.1□□□□□ -0.63
RAB11FIP4-202ENST00000578148 ZFYVE28Q9HCC9 887 aa11.1□□□□□ -0.63
RAB11FIP4-202ENST00000578148 ZCCHC17Q9NP64 241 aaKnown RBP11.1□□□□□ -0.63
RAB11FIP4-202ENST00000578148 PCDH10Q9P2E7 1040 aa11.1□□□□□ -0.63
RAB11FIP4-202ENST00000578148 SNCAIPQ9Y6H5 919 aa11.1□□□□□ -0.63
RAB11FIP4-202ENST00000578148 AK9Q5TCS8 1911 aa11.09□□□□□ -0.63
RAB11FIP4-202ENST00000578148 POTEFA5A3E0 1075 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms