RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 BMP2KLQ5H9B9 411 aa12.29□□□□□ -0.44
CRLF3-202ENST00000577725 OTOP1Q7RTM1 612 aa12.29□□□□□ -0.44
CRLF3-202ENST00000577725 MICALL2Q8IY33 904 aa12.29□□□□□ -0.44
CRLF3-202ENST00000577725 NEUROD6Q96NK8 337 aa12.29□□□□□ -0.44
CRLF3-202ENST00000577725 PRDM6Q9NQX0 595 aa12.29□□□□□ -0.44
CRLF3-202ENST00000577725 DBNLQ9UJU6 430 aaKnown RBP12.29□□□□□ -0.44
CRLF3-202ENST00000577725 A0A1B0GUL6 1792 aa12.28□□□□□ -0.44
CRLF3-202ENST00000577725 UNC80Q8N2C7 3258 aa12.28□□□□□ -0.44
CRLF3-202ENST00000577725 SHTN1A0MZ66 631 aa12.28□□□□□ -0.44
CRLF3-202ENST00000577725 SNAP23O00161 211 aa12.28□□□□□ -0.44
CRLF3-202ENST00000577725 ANKRD18AQ8IVF6 992 aa12.28□□□□□ -0.44
CRLF3-202ENST00000577725 PI4K2BQ8TCG2 481 aa12.28□□□□□ -0.44
CRLF3-202ENST00000577725 CDC5LQ99459 802 aaKnown RBP12.28□□□□□ -0.44
CRLF3-202ENST00000577725 MPHOSPH8Q99549 860 aa12.28□□□□□ -0.44
CRLF3-202ENST00000577725 OSBPL3Q9H4L5 887 aa12.28□□□□□ -0.44
CRLF3-202ENST00000577725 AOX1Q06278 1338 aa12.28□□□□□ -0.44
CRLF3-202ENST00000577725 AK9Q5TCS8 1911 aa12.27□□□□□ -0.44
CRLF3-202ENST00000577725 A0A1B0GUL7 405 aa12.27□□□□□ -0.45
CRLF3-202ENST00000577725 TAF5LO75529 589 aa12.27□□□□□ -0.45
CRLF3-202ENST00000577725 RAD17O75943 681 aa12.27□□□□□ -0.45
CRLF3-202ENST00000577725 SDSP20132 328 aa12.27□□□□□ -0.45
CRLF3-202ENST00000577725 FKBP1BP68106 108 aa12.27□□□□□ -0.45
CRLF3-202ENST00000577725 ATP2B3Q16720 1220 aa12.27□□□□□ -0.45
CRLF3-202ENST00000577725 DDX46Q7L014 1031 aaKnown RBP12.27□□□□□ -0.45
CRLF3-202ENST00000577725 SAMD7Q7Z3H4 446 aa12.27□□□□□ -0.45
CRLF3-202ENST00000577725 PRO3102Q9H379 93 aa12.27□□□□□ -0.45
CRLF3-202ENST00000577725 ECHDC1Q9NTX5 307 aa12.27□□□□□ -0.45
CRLF3-202ENST00000577725 PTPN22Q9Y2R2 807 aa12.27□□□□□ -0.45
CRLF3-202ENST00000577725 TRIM6-TRIM34B2RNG4 842 aa12.26□□□□□ -0.45
CRLF3-202ENST00000577725 PPEF1O14829 653 aaPredicted RBP12.26□□□□□ -0.45
CRLF3-202ENST00000577725 SEC24BO95487 1268 aa12.26□□□□□ -0.45
CRLF3-202ENST00000577725 HOXA10P31260 410 aaPredicted RBP12.26□□□□□ -0.45
CRLF3-202ENST00000577725 CHRNDQ07001 517 aa12.26□□□□□ -0.45
CRLF3-202ENST00000577725 SULF1Q8IWU6 871 aa12.26□□□□□ -0.45
CRLF3-202ENST00000577725 VGLL2Q8N8G2 317 aa12.26□□□□□ -0.45
CRLF3-202ENST00000577725 SUPT20HQ8NEM7 779 aa12.26□□□□□ -0.45
CRLF3-202ENST00000577725 RPGRQ92834 1020 aaKnown RBP12.26□□□□□ -0.45
CRLF3-202ENST00000577725 RILPL2Q969X0 211 aa12.26□□□□□ -0.45
CRLF3-202ENST00000577725 GPATCH3Q96I76 525 aa12.26□□□□□ -0.45
CRLF3-202ENST00000577725 TMX4Q9H1E5 349 aaPredicted RBP12.26□□□□□ -0.45
CRLF3-202ENST00000577725 BOLA2Q9H3K6 86 aa12.26□□□□□ -0.45
CRLF3-202ENST00000577725 GPR108Q9NPR9 543 aa12.26□□□□□ -0.45
CRLF3-202ENST00000577725 NDUFB9Q9Y6M9 179 aa12.26□□□□□ -0.45
CRLF3-202ENST00000577725 TTC41PQ6P2S7 1318 aa12.26□□□□□ -0.45
CRLF3-202ENST00000577725 A0A1W2PPC1 479 aa12.25□□□□□ -0.45
CRLF3-202ENST00000577725 CDC45O75419 566 aa12.25□□□□□ -0.45
CRLF3-202ENST00000577725 GLRX3O76003 335 aaKnown RBP12.25□□□□□ -0.45
CRLF3-202ENST00000577725 RPS8P62241 208 aaKnown RBP12.25□□□□□ -0.45
CRLF3-202ENST00000577725 SREBF2Q12772 1141 aa12.25□□□□□ -0.45
CRLF3-202ENST00000577725 TBC1D10BQ4KMP7 808 aaPredicted RBP12.25□□□□□ -0.45
CRLF3-202ENST00000577725 TBC1D9Q6ZT07 1266 aa12.25□□□□□ -0.45
CRLF3-202ENST00000577725 DPF2Q92785 391 aa12.25□□□□□ -0.45
CRLF3-202ENST00000577725 CDCA5Q96FF9 252 aa12.25□□□□□ -0.45
CRLF3-202ENST00000577725 XAGE2Q96GT9 111 aa12.25□□□□□ -0.45
CRLF3-202ENST00000577725 R3HDMLQ9H3Y0 253 aa12.25□□□□□ -0.45
CRLF3-202ENST00000577725 STXBP5LQ9Y2K9 1186 aa12.25□□□□□ -0.45
CRLF3-202ENST00000577725 MROH5Q6ZUA9 1318 aa12.25□□□□□ -0.45
CRLF3-202ENST00000577725 WTIPA6NIX2 430 aaPredicted RBP12.24□□□□□ -0.45
CRLF3-202ENST00000577725 SOX1O00570 391 aaPredicted RBP12.24□□□□□ -0.45
CRLF3-202ENST00000577725 ERC2O15083 957 aa12.24□□□□□ -0.45
CRLF3-202ENST00000577725 GRAPQ13588 217 aa12.24□□□□□ -0.45
CRLF3-202ENST00000577725 GRAPLQ8TC17 118 aaPredicted RBP12.24□□□□□ -0.45
CRLF3-202ENST00000577725 ARAP2Q8WZ64 1704 aa12.24□□□□□ -0.45
CRLF3-202ENST00000577725 EDC3Q96F86 508 aaKnown RBP12.24□□□□□ -0.45
CRLF3-202ENST00000577725 LRCH3Q96II8 777 aa12.24□□□□□ -0.45
CRLF3-202ENST00000577725 BSDC1Q9NW68 430 aaPredicted RBP12.24□□□□□ -0.45
CRLF3-202ENST00000577725 MINPP1Q9UNW1 487 aa12.24□□□□□ -0.45
CRLF3-202ENST00000577725 AKAP2Q9Y2D5 859 aa12.24□□□□□ -0.45
CRLF3-202ENST00000577725 PDE8BO95263 885 aa12.23□□□□□ -0.45
CRLF3-202ENST00000577725 ALDH1A1P00352 501 aa12.23□□□□□ -0.45
CRLF3-202ENST00000577725 EGFRP00533 1210 aa12.23□□□□□ -0.45
CRLF3-202ENST00000577725 FGFR2P21802 821 aa12.23□□□□□ -0.45
CRLF3-202ENST00000577725 PUM3Q15397 648 aaKnown RBP12.23□□□□□ -0.45
CRLF3-202ENST00000577725 GORABQ5T7V8 394 aa12.23□□□□□ -0.45
CRLF3-202ENST00000577725 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.23□□□□□ -0.45
CRLF3-202ENST00000577725 DPF3Q92784 378 aa12.23□□□□□ -0.45
CRLF3-202ENST00000577725 RBM17Q96I25 401 aaKnown RBP12.23□□□□□ -0.45
CRLF3-202ENST00000577725 ZNF333Q96JL9 665 aa12.23□□□□□ -0.45
CRLF3-202ENST00000577725 CRAMP1Q96RY5 1269 aa12.23□□□□□ -0.45
CRLF3-202ENST00000577725 DNAJC2Q99543 621 aaKnown RBP12.23□□□□□ -0.45
CRLF3-202ENST00000577725 RTFDC1Q9BY42 306 aaPredicted RBP12.23□□□□□ -0.45
CRLF3-202ENST00000577725 SLC5A1P13866 664 aa12.22□□□□□ -0.45
CRLF3-202ENST00000577725 ATP5JP18859 108 aa12.22□□□□□ -0.45
CRLF3-202ENST00000577725 MFAP1P55081 439 aaKnown RBP12.22□□□□□ -0.45
CRLF3-202ENST00000577725 KIAA2012Q0VF49 1180 aa12.22□□□□□ -0.45
CRLF3-202ENST00000577725 SLC4A8Q2Y0W8 1093 aa12.22□□□□□ -0.45
CRLF3-202ENST00000577725 TTC39AQ5SRH9 613 aa12.22□□□□□ -0.45
CRLF3-202ENST00000577725 ERO1AQ96HE7 468 aa12.22□□□□□ -0.45
CRLF3-202ENST00000577725 SNRKQ9NRH2 765 aa12.22□□□□□ -0.45
CRLF3-202ENST00000577725 GGA3Q9NZ52 723 aa12.22□□□□□ -0.45
CRLF3-202ENST00000577725 ZBTB12Q9Y330 459 aaPredicted RBP12.22□□□□□ -0.45
CRLF3-202ENST00000577725 RBM19Q9Y4C8 960 aaKnown RBP12.22□□□□□ -0.45
CRLF3-202ENST00000577725 LAMA3Q16787 3333 aa12.22□□□□□ -0.45
CRLF3-202ENST00000577725 PHKA1P46020 1223 aa12.21□□□□□ -0.45
CRLF3-202ENST00000577725 SCARF1Q14162 830 aa12.21□□□□□ -0.45
CRLF3-202ENST00000577725 RBM26Q5T8P6 1007 aaKnown RBP12.21□□□□□ -0.45
CRLF3-202ENST00000577725 GPR153Q6NV75 609 aa12.21□□□□□ -0.45
CRLF3-202ENST00000577725 MPNDQ8N594 471 aa12.21□□□□□ -0.45
CRLF3-202ENST00000577725 LPIN2Q92539 896 aa12.21□□□□□ -0.45
CRLF3-202ENST00000577725 ATP6V0A2Q9Y487 856 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms