RNA–Protein interactions for RNA: ENST00000577497.5

CUEDC1-204, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-204ENST00000577497 ARMC9Q7Z3E5 817 aa16.94■□□□□ 0.3
CUEDC1-204ENST00000577497 ABHD8Q96I13 439 aa16.94■□□□□ 0.3
CUEDC1-204ENST00000577497 SAGE1Q9NXZ1 904 aa16.94■□□□□ 0.3
CUEDC1-204ENST00000577497 PPP2R3BQ9Y5P8 575 aa16.94■□□□□ 0.3
CUEDC1-204ENST00000577497 ATP2B3Q16720 1220 aa16.93■□□□□ 0.3
CUEDC1-204ENST00000577497 CLMNQ96JQ2 1002 aa16.93■□□□□ 0.3
CUEDC1-204ENST00000577497 COPRSQ9NQ92 184 aa16.93■□□□□ 0.3
CUEDC1-204ENST00000577497 FBXO3Q9UK99 471 aa16.93■□□□□ 0.3
CUEDC1-204ENST00000577497 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.93■□□□□ 0.3
CUEDC1-204ENST00000577497 AKAP11Q9UKA4 1901 aa16.92■□□□□ 0.3
CUEDC1-204ENST00000577497 MYH13Q9UKX3 1938 aa16.92■□□□□ 0.3
CUEDC1-204ENST00000577497 TCP10L2B9ZVM9 353 aa16.92■□□□□ 0.3
CUEDC1-204ENST00000577497 GNAI3P08754 354 aa16.92■□□□□ 0.3
CUEDC1-204ENST00000577497 CACNB3P54284 484 aa16.92■□□□□ 0.3
CUEDC1-204ENST00000577497 MAP3K11Q16584 847 aa16.92■□□□□ 0.3
CUEDC1-204ENST00000577497 TBC1D22AQ8WUA7 517 aa16.92■□□□□ 0.3
CUEDC1-204ENST00000577497 TEPSINQ96N21 525 aa16.92■□□□□ 0.3
CUEDC1-204ENST00000577497 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.92■□□□□ 0.3
CUEDC1-204ENST00000577497 CEP126Q9P2H0 1117 aa16.92■□□□□ 0.3
CUEDC1-204ENST00000577497 IPO8O15397 1037 aaKnown RBP16.91■□□□□ 0.3
CUEDC1-204ENST00000577497 SRGAP3O43295 1099 aa16.91■□□□□ 0.3
CUEDC1-204ENST00000577497 ADORA1P30542 326 aa16.91■□□□□ 0.3
CUEDC1-204ENST00000577497 IL15P40933 162 aaPredicted RBP16.91■□□□□ 0.3
CUEDC1-204ENST00000577497 TMEM57Q8N5G2 664 aa16.91■□□□□ 0.3
CUEDC1-204ENST00000577497 TMEM39BQ9GZU3 492 aa16.91■□□□□ 0.3
CUEDC1-204ENST00000577497 OTOFQ9HC10 1997 aa16.91■□□□□ 0.3
CUEDC1-204ENST00000577497 PHKA1P46020 1223 aa16.9■□□□□ 0.3
CUEDC1-204ENST00000577497 MTX1Q13505 466 aa16.9■□□□□ 0.3
CUEDC1-204ENST00000577497 SPRYD7Q5W111 196 aa16.9■□□□□ 0.3
CUEDC1-204ENST00000577497 TEKT1Q969V4 418 aa16.9■□□□□ 0.3
CUEDC1-204ENST00000577497 MCOLN1Q9GZU1 580 aa16.9■□□□□ 0.3
CUEDC1-204ENST00000577497 HDAC5Q9UQL6 1122 aa16.9■□□□□ 0.3
CUEDC1-204ENST00000577497 USP2O75604 605 aaPredicted RBP16.89■□□□□ 0.29
CUEDC1-204ENST00000577497 HDLBPQ00341 1268 aaKnown RBP16.89■□□□□ 0.29
CUEDC1-204ENST00000577497 TNFAIP1Q13829 316 aa16.89■□□□□ 0.29
CUEDC1-204ENST00000577497 SUPT20HL1Q3ZLR7 823 aa16.89■□□□□ 0.29
CUEDC1-204ENST00000577497 ZKSCAN2Q63HK3 967 aa16.89■□□□□ 0.29
CUEDC1-204ENST00000577497 APOBEC3HQ6NTF7 200 aaKnown RBP16.89■□□□□ 0.29
CUEDC1-204ENST00000577497 REM2Q8IYK8 340 aaPredicted RBP16.89■□□□□ 0.29
CUEDC1-204ENST00000577497 ZDHHC15Q96MV8 337 aa16.89■□□□□ 0.29
CUEDC1-204ENST00000577497 PNMA6EA0A0J9YXQ4 647 aa16.88■□□□□ 0.29
CUEDC1-204ENST00000577497 PPP1R12BO60237 982 aaPredicted RBP16.88■□□□□ 0.29
CUEDC1-204ENST00000577497 TBC1D8O95759 1140 aa16.88■□□□□ 0.29
CUEDC1-204ENST00000577497 PRDX5P30044 214 aa16.88■□□□□ 0.29
CUEDC1-204ENST00000577497 TM4SF4P48230 202 aa16.88■□□□□ 0.29
CUEDC1-204ENST00000577497 TFCP2Q12800 502 aa16.88■□□□□ 0.29
CUEDC1-204ENST00000577497 ZBED9Q6R2W3 1325 aa16.88■□□□□ 0.29
CUEDC1-204ENST00000577497 GNAI2P04899 355 aa16.87■□□□□ 0.29
CUEDC1-204ENST00000577497 RLBP1P12271 317 aa16.87■□□□□ 0.29
CUEDC1-204ENST00000577497 GJA5P36382 358 aa16.87■□□□□ 0.29
CUEDC1-204ENST00000577497 TIMM10P62072 90 aa16.87■□□□□ 0.29
CUEDC1-204ENST00000577497 DGKZQ13574 1117 aa16.87■□□□□ 0.29
CUEDC1-204ENST00000577497 DIXDC1Q155Q3 683 aa16.87■□□□□ 0.29
CUEDC1-204ENST00000577497 CCDC102BQ68D86 513 aa16.87■□□□□ 0.29
CUEDC1-204ENST00000577497 WDR66Q8TBY9 1149 aa16.87■□□□□ 0.29
CUEDC1-204ENST00000577497 SLC10A4Q96EP9 437 aa16.87■□□□□ 0.29
CUEDC1-204ENST00000577497 WNK4Q96J92 1243 aa16.87■□□□□ 0.29
CUEDC1-204ENST00000577497 SUGT1Q9Y2Z0 365 aa16.87■□□□□ 0.29
CUEDC1-204ENST00000577497 LAMB1P07942 1786 aa16.87■□□□□ 0.29
CUEDC1-204ENST00000577497 A0A1B0GUL7 405 aa16.86■□□□□ 0.29
CUEDC1-204ENST00000577497 IREB2P48200 963 aaKnown RBP16.86■□□□□ 0.29
CUEDC1-204ENST00000577497 MRIQ9BWK5 157 aa16.86■□□□□ 0.29
CUEDC1-204ENST00000577497 R3HDMLQ9H3Y0 253 aa16.86■□□□□ 0.29
CUEDC1-204ENST00000577497 DAGLAQ9Y4D2 1042 aa16.86■□□□□ 0.29
CUEDC1-204ENST00000577497 MAST3O60307 1309 aa16.86■□□□□ 0.29
CUEDC1-204ENST00000577497 TNNI2P48788 182 aa16.85■□□□□ 0.29
CUEDC1-204ENST00000577497 SREBF2Q12772 1141 aa16.85■□□□□ 0.29
CUEDC1-204ENST00000577497 RASGRF1Q13972 1273 aa16.85■□□□□ 0.29
CUEDC1-204ENST00000577497 HHIPL2Q6UWX4 724 aa16.85■□□□□ 0.29
CUEDC1-204ENST00000577497 C1orf115Q9H7X2 142 aa16.85■□□□□ 0.29
CUEDC1-204ENST00000577497 GNL3LQ9NVN8 582 aaKnown RBP16.85■□□□□ 0.29
CUEDC1-204ENST00000577497 ZBTB48P10074 688 aaPredicted RBP16.84■□□□□ 0.29
CUEDC1-204ENST00000577497 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.84■□□□□ 0.29
CUEDC1-204ENST00000577497 ANKRD13AQ8IZ07 590 aa16.84■□□□□ 0.29
CUEDC1-204ENST00000577497 CNKSR2Q8WXI2 1034 aa16.84■□□□□ 0.29
CUEDC1-204ENST00000577497 XAGE2Q96GT9 111 aa16.84■□□□□ 0.29
CUEDC1-204ENST00000577497 ELP3Q9H9T3 547 aa16.84■□□□□ 0.29
CUEDC1-204ENST00000577497 DENND2AQ9ULE3 1009 aa16.84■□□□□ 0.29
CUEDC1-204ENST00000577497 SALL1Q9NSC2 1324 aa16.84■□□□□ 0.29
CUEDC1-204ENST00000577497 CCDC85CA6NKD9 419 aa16.83■□□□□ 0.28
CUEDC1-204ENST00000577497 IGF2BP3O00425 579 aaKnown RBP eCLIP16.83■□□□□ 0.28
CUEDC1-204ENST00000577497 SEMA3EO15041 775 aa16.83■□□□□ 0.28
CUEDC1-204ENST00000577497 LDHBP07195 334 aaKnown RBP16.83■□□□□ 0.28
CUEDC1-204ENST00000577497 CDC42EP5Q6NZY7 148 aa16.83■□□□□ 0.28
CUEDC1-204ENST00000577497 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.83■□□□□ 0.28
CUEDC1-204ENST00000577497 ZNF296Q8WUU4 475 aaPredicted RBP16.83■□□□□ 0.28
CUEDC1-204ENST00000577497 UNCXA6NJT0 531 aa16.82■□□□□ 0.28
CUEDC1-204ENST00000577497 NFIAQ12857 509 aa16.82■□□□□ 0.28
CUEDC1-204ENST00000577497 VGLL4Q14135 290 aa16.82■□□□□ 0.28
CUEDC1-204ENST00000577497 PI16Q6UXB8 463 aa16.82■□□□□ 0.28
CUEDC1-204ENST00000577497 FAM83AQ86UY5 434 aa16.82■□□□□ 0.28
CUEDC1-204ENST00000577497 IFNL1Q8IU54 200 aa16.82■□□□□ 0.28
CUEDC1-204ENST00000577497 FTSJ3Q8IY81 847 aaKnown RBP16.82■□□□□ 0.28
CUEDC1-204ENST00000577497 OPTNQ96CV9 577 aa16.82■□□□□ 0.28
CUEDC1-204ENST00000577497 TMOD2Q9NZR1 351 aa16.82■□□□□ 0.28
CUEDC1-204ENST00000577497 MANSC4A6NHS7 340 aaPredicted RBP16.81■□□□□ 0.28
CUEDC1-204ENST00000577497 POLA2Q14181 598 aa16.81■□□□□ 0.28
CUEDC1-204ENST00000577497 FKBP1CQ5VVH2 108 aa16.81■□□□□ 0.28
CUEDC1-204ENST00000577497 ITPRIPQ8IWB1 547 aa16.81■□□□□ 0.28
CUEDC1-204ENST00000577497 NEUROD6Q96NK8 337 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms