RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 GTF2A2P52657 109 aa12.89□□□□□ -0.35
NPLOC4-220ENST00000576940 TNFAIP1Q13829 316 aa12.89□□□□□ -0.35
NPLOC4-220ENST00000576940 GRIK5Q16478 980 aa12.89□□□□□ -0.35
NPLOC4-220ENST00000576940 MFSD14BQ5SR56 506 aa12.89□□□□□ -0.35
NPLOC4-220ENST00000576940 LMBR1LQ6UX01 489 aa12.89□□□□□ -0.35
NPLOC4-220ENST00000576940 LDHAL6AQ6ZMR3 332 aa12.89□□□□□ -0.35
NPLOC4-220ENST00000576940 DZIP1LQ8IYY4 767 aaKnown RBP12.89□□□□□ -0.35
NPLOC4-220ENST00000576940 TDRD7Q8NHU6 1098 aaKnown RBP12.89□□□□□ -0.35
NPLOC4-220ENST00000576940 LAMB1P07942 1786 aa12.89□□□□□ -0.35
NPLOC4-220ENST00000576940 FAM205AQ6ZU69 1335 aa12.88□□□□□ -0.35
NPLOC4-220ENST00000576940 F6X3S4 739 aa12.88□□□□□ -0.35
NPLOC4-220ENST00000576940 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.88□□□□□ -0.351e-6■■■■■ 29.6
NPLOC4-220ENST00000576940 CNNM1Q9NRU3 951 aa12.88□□□□□ -0.35
NPLOC4-220ENST00000576940 SERPINA10Q9UK55 444 aa12.88□□□□□ -0.35
NPLOC4-220ENST00000576940 TLR2O60603 784 aa12.87□□□□□ -0.35
NPLOC4-220ENST00000576940 HIBADHP31937 336 aaKnown RBP12.87□□□□□ -0.35
NPLOC4-220ENST00000576940 CRKP46108 304 aa12.87□□□□□ -0.35
NPLOC4-220ENST00000576940 CACNB3P54284 484 aa12.87□□□□□ -0.35
NPLOC4-220ENST00000576940 MTFR1Q15390 333 aa12.87□□□□□ -0.35
NPLOC4-220ENST00000576940 CCDC57Q2TAC2 916 aa12.87□□□□□ -0.35
NPLOC4-220ENST00000576940 CHRDL2Q6WN34 429 aa12.87□□□□□ -0.35
NPLOC4-220ENST00000576940 FAM84BQ96KN1 310 aaPredicted RBP12.87□□□□□ -0.35
NPLOC4-220ENST00000576940 CSADQ9Y600 493 aa12.87□□□□□ -0.35
NPLOC4-220ENST00000576940 CEP290O15078 2479 aa12.87□□□□□ -0.35
NPLOC4-220ENST00000576940 BTBD19C9JJ37 291 aa12.86□□□□□ -0.35
NPLOC4-220ENST00000576940 TNNI2P48788 182 aa12.86□□□□□ -0.35
NPLOC4-220ENST00000576940 LACTBP83111 547 aaPredicted RBP12.86□□□□□ -0.35
NPLOC4-220ENST00000576940 TAF7LQ5H9L4 462 aa12.86□□□□□ -0.35
NPLOC4-220ENST00000576940 BEND3Q5T5X7 828 aa12.86□□□□□ -0.35
NPLOC4-220ENST00000576940 WWC1Q8IX03 1113 aa12.86□□□□□ -0.35
NPLOC4-220ENST00000576940 DPF3Q92784 378 aa12.86□□□□□ -0.35
NPLOC4-220ENST00000576940 ZKSCAN4Q969J2 545 aaPredicted RBP12.86□□□□□ -0.35
NPLOC4-220ENST00000576940 PUS3Q9BZE2 481 aaKnown RBP12.86□□□□□ -0.35
NPLOC4-220ENST00000576940 OTOFQ9HC10 1997 aa12.86□□□□□ -0.35
NPLOC4-220ENST00000576940 TRIOBPQ9H2D6 2365 aa12.86□□□□□ -0.35
NPLOC4-220ENST00000576940 SPDYE5A6NIY4 337 aa12.85□□□□□ -0.35
NPLOC4-220ENST00000576940 IRF6O14896 467 aa12.85□□□□□ -0.35
NPLOC4-220ENST00000576940 VAMP4O75379 141 aa12.85□□□□□ -0.35
NPLOC4-220ENST00000576940 CTGFP29279 349 aa12.85□□□□□ -0.35
NPLOC4-220ENST00000576940 KIF22Q14807 665 aa12.85□□□□□ -0.35
NPLOC4-220ENST00000576940 RBM27Q9P2N5 1060 aaKnown RBP12.85□□□□□ -0.35
NPLOC4-220ENST00000576940 IQSEC3Q9UPP2 1182 aaPredicted RBP12.85□□□□□ -0.35
NPLOC4-220ENST00000576940 SNCAIPQ9Y6H5 919 aa12.85□□□□□ -0.35
NPLOC4-220ENST00000576940 ZSWIM8A7E2V4 1837 aa12.85□□□□□ -0.35
NPLOC4-220ENST00000576940 CETPP11597 493 aa12.84□□□□□ -0.35
NPLOC4-220ENST00000576940 UBE4AQ14139 1066 aa12.84□□□□□ -0.35
NPLOC4-220ENST00000576940 CCDC184Q52MB2 194 aa12.84□□□□□ -0.35
NPLOC4-220ENST00000576940 ERO1BQ86YB8 467 aa12.84□□□□□ -0.35
NPLOC4-220ENST00000576940 CPA4Q9UI42 421 aa12.84□□□□□ -0.35
NPLOC4-220ENST00000576940 A0A1B0GUL6 1792 aa12.84□□□□□ -0.35
NPLOC4-220ENST00000576940 WDHD1O75717 1129 aaPredicted RBP12.83□□□□□ -0.36
NPLOC4-220ENST00000576940 CHAF1AQ13111 956 aaPredicted RBP12.83□□□□□ -0.36
NPLOC4-220ENST00000576940 CCDC27Q2M243 656 aa12.83□□□□□ -0.36
NPLOC4-220ENST00000576940 C17orf99Q6UX52 265 aa12.83□□□□□ -0.36
NPLOC4-220ENST00000576940 MIGA2Q7L4E1 593 aa12.83□□□□□ -0.36
NPLOC4-220ENST00000576940 SHISA4Q96DD7 197 aa12.83□□□□□ -0.36
NPLOC4-220ENST00000576940 WRNIP1Q96S55 665 aa12.83□□□□□ -0.36
NPLOC4-220ENST00000576940 RANBP2P49792 3224 aaKnown RBP12.83□□□□□ -0.36
NPLOC4-220ENST00000576940 GRM8O00222 908 aa12.82□□□□□ -0.36
NPLOC4-220ENST00000576940 PSMC4P43686 418 aa12.82□□□□□ -0.36
NPLOC4-220ENST00000576940 SNAPC2Q13487 334 aa12.82□□□□□ -0.36
NPLOC4-220ENST00000576940 FBXO33Q7Z6M2 555 aa12.82□□□□□ -0.36
NPLOC4-220ENST00000576940 SALL2Q9Y467 1007 aaPredicted RBP12.82□□□□□ -0.36
NPLOC4-220ENST00000576940 FMNL1O95466 1100 aaPredicted RBP12.81□□□□□ -0.36
NPLOC4-220ENST00000576940 GNRH1P01148 92 aa12.81□□□□□ -0.36
NPLOC4-220ENST00000576940 PRMT2P55345 433 aa12.81□□□□□ -0.36
NPLOC4-220ENST00000576940 EXOSC9Q06265 439 aaKnown RBP12.81□□□□□ -0.36
NPLOC4-220ENST00000576940 PPIL2Q13356 520 aa12.81□□□□□ -0.36
NPLOC4-220ENST00000576940 VPS37DQ86XT2 251 aa12.81□□□□□ -0.36
NPLOC4-220ENST00000576940 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.81□□□□□ -0.36
NPLOC4-220ENST00000576940 KAZALD1Q96I82 304 aa12.81□□□□□ -0.36
NPLOC4-220ENST00000576940 TRIM47Q96LD4 638 aa12.81□□□□□ -0.36
NPLOC4-220ENST00000576940 ZCCHC17Q9NP64 241 aaKnown RBP12.81□□□□□ -0.36
NPLOC4-220ENST00000576940 C9orf78Q9NZ63 289 aaPredicted RBP12.81□□□□□ -0.36
NPLOC4-220ENST00000576940 SRRDQ9UH36 339 aa12.81□□□□□ -0.36
NPLOC4-220ENST00000576940 RIPOR2Q9Y4F9 1068 aa12.81□□□□□ -0.36
NPLOC4-220ENST00000576940 FANCIQ9NVI1 1328 aa12.81□□□□□ -0.36
NPLOC4-220ENST00000576940 PDHXO00330 501 aa12.8□□□□□ -0.36
NPLOC4-220ENST00000576940 FRAT2O75474 233 aaPredicted RBP12.8□□□□□ -0.36
NPLOC4-220ENST00000576940 OSBPP22059 807 aa12.8□□□□□ -0.36
NPLOC4-220ENST00000576940 INPP5BP32019 993 aa12.8□□□□□ -0.36
NPLOC4-220ENST00000576940 GRK4P32298 578 aa12.8□□□□□ -0.36
NPLOC4-220ENST00000576940 HDLBPQ00341 1268 aaKnown RBP12.8□□□□□ -0.36
NPLOC4-220ENST00000576940 PPATQ06203 517 aa12.8□□□□□ -0.36
NPLOC4-220ENST00000576940 APOBEC3HQ6NTF7 200 aaKnown RBP12.8□□□□□ -0.36
NPLOC4-220ENST00000576940 RAET1EQ8TD07 263 aa12.8□□□□□ -0.36
NPLOC4-220ENST00000576940 TEKT1Q969V4 418 aa12.8□□□□□ -0.36
NPLOC4-220ENST00000576940 SUCLG2Q96I99 432 aa12.8□□□□□ -0.36
NPLOC4-220ENST00000576940 CCL5P13501 91 aa12.79□□□□□ -0.36
NPLOC4-220ENST00000576940 HOXD10P28358 340 aa12.79□□□□□ -0.36
NPLOC4-220ENST00000576940 GJA8P48165 433 aa12.79□□□□□ -0.36
NPLOC4-220ENST00000576940 BCAMP50895 628 aa12.79□□□□□ -0.36
NPLOC4-220ENST00000576940 LRRC24Q50LG9 513 aa12.79□□□□□ -0.36
NPLOC4-220ENST00000576940 SLC4A10Q6U841 1118 aa12.79□□□□□ -0.36
NPLOC4-220ENST00000576940 FAM83AQ86UY5 434 aa12.79□□□□□ -0.36
NPLOC4-220ENST00000576940 ZDHHC15Q96MV8 337 aa12.79□□□□□ -0.36
NPLOC4-220ENST00000576940 RNF208Q9H0X6 261 aa12.79□□□□□ -0.36
NPLOC4-220ENST00000576940 IL16Q14005 1332 aa12.79□□□□□ -0.36
NPLOC4-220ENST00000576940 DLL1O00548 723 aa12.78□□□□□ -0.36
NPLOC4-220ENST00000576940 GJB1P08034 283 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms