RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 TTC24A2A3L6 582 aaPredicted RBP8.19□□□□□ -1.1
NUP88-212ENST00000576708 ANXA1P04083 346 aa8.19□□□□□ -1.1
NUP88-212ENST00000576708 NPR1P16066 1061 aa8.19□□□□□ -1.1
NUP88-212ENST00000576708 GTF2E1P29083 439 aaPredicted RBP8.19□□□□□ -1.1
NUP88-212ENST00000576708 DDX10Q13206 875 aaKnown RBP8.19□□□□□ -1.1
NUP88-212ENST00000576708 CCDC146Q8IYE0 955 aa8.19□□□□□ -1.1
NUP88-212ENST00000576708 CYP4X1Q8N118 509 aa8.19□□□□□ -1.1
NUP88-212ENST00000576708 PNISRQ8TF01 805 aaKnown RBP8.19□□□□□ -1.1
NUP88-212ENST00000576708 ZNF277Q9NRM2 450 aaPredicted RBP8.19□□□□□ -1.1
NUP88-212ENST00000576708 LTBP3Q9NS15 1303 aa8.19□□□□□ -1.1
NUP88-212ENST00000576708 ABCC12Q96J65 1359 aa8.19□□□□□ -1.1
NUP88-212ENST00000576708 LAMB4A4D0S4 1761 aa8.18□□□□□ -1.1
NUP88-212ENST00000576708 KLRG2A4D1S0 409 aaPredicted RBP8.18□□□□□ -1.1
NUP88-212ENST00000576708 J3QL48 77 aa8.18□□□□□ -1.1
NUP88-212ENST00000576708 EIF2S2P20042 333 aaKnown RBP8.18□□□□□ -1.1
NUP88-212ENST00000576708 RIPK4P57078 832 aa8.18□□□□□ -1.1
NUP88-212ENST00000576708 CCDC93Q567U6 631 aa8.18□□□□□ -1.1
NUP88-212ENST00000576708 SUSD4Q5VX71 490 aa8.18□□□□□ -1.1
NUP88-212ENST00000576708 KLRG1Q96E93 195 aa8.18□□□□□ -1.1
NUP88-212ENST00000576708 KCTD15Q96SI1 283 aaPredicted RBP8.18□□□□□ -1.1
NUP88-212ENST00000576708 CEP126Q9P2H0 1117 aa8.18□□□□□ -1.1
NUP88-212ENST00000576708 TSPYL4Q9UJ04 414 aa8.18□□□□□ -1.1
NUP88-212ENST00000576708 MAP3K15Q6ZN16 1313 aa8.18□□□□□ -1.1
NUP88-212ENST00000576708 UBN2Q6ZU65 1347 aa8.18□□□□□ -1.1
NUP88-212ENST00000576708 ERVV-1B6SEH8 477 aa8.17□□□□□ -1.1
NUP88-212ENST00000576708 PIK3CDO00329 1044 aa8.17□□□□□ -1.1
NUP88-212ENST00000576708 TCERG1O14776 1098 aaKnown RBP8.17□□□□□ -1.1
NUP88-212ENST00000576708 FSHRP23945 695 aa8.17□□□□□ -1.1
NUP88-212ENST00000576708 SOX11P35716 441 aa8.17□□□□□ -1.1
NUP88-212ENST00000576708 GRM5P41594 1212 aa8.17□□□□□ -1.1
NUP88-212ENST00000576708 TMPOP42166 694 aaKnown RBP8.17□□□□□ -1.1
NUP88-212ENST00000576708 FKBP4Q02790 459 aaKnown RBP eCLIP8.17□□□□□ -1.1
NUP88-212ENST00000576708 KRT24Q2M2I5 525 aa8.17□□□□□ -1.1
NUP88-212ENST00000576708 PROSER3Q2NL68 480 aa8.17□□□□□ -1.1
NUP88-212ENST00000576708 SOGA3Q5TF21 947 aa8.17□□□□□ -1.1
NUP88-212ENST00000576708 KIF6Q6ZMV9 814 aa8.17□□□□□ -1.1
NUP88-212ENST00000576708 SNIP1Q8TAD8 396 aaKnown RBP8.17□□□□□ -1.1
NUP88-212ENST00000576708 ZNF428Q96B54 188 aa8.17□□□□□ -1.1
NUP88-212ENST00000576708 CDK15Q96Q40 435 aa8.17□□□□□ -1.1
NUP88-212ENST00000576708 ZNF541Q9H0D2 1346 aa8.17□□□□□ -1.1
NUP88-212ENST00000576708 ARFGEF2Q9Y6D5 1785 aa8.17□□□□□ -1.1
NUP88-212ENST00000576708 RALBP1Q15311 655 aa8.16□□□□□ -1.1
NUP88-212ENST00000576708 NBPF20Q3BBV1 942 aa8.16□□□□□ -1.1
NUP88-212ENST00000576708 LRP10Q7Z4F1 713 aa8.16□□□□□ -1.1
NUP88-212ENST00000576708 ZNF34Q8IZ26 560 aa8.16□□□□□ -1.1
NUP88-212ENST00000576708 SYNE4Q8N205 404 aa8.16□□□□□ -1.1
NUP88-212ENST00000576708 PNNQ9H307 717 aaKnown RBP8.16□□□□□ -1.1
NUP88-212ENST00000576708 TOR4AQ9NXH8 423 aa8.16□□□□□ -1.1
NUP88-212ENST00000576708 DICER1Q9UPY3 1922 aaKnown RBP8.16□□□□□ -1.1
NUP88-212ENST00000576708 NUP98P52948 1817 aa8.15□□□□□ -1.1
NUP88-212ENST00000576708 NTSR2O95665 410 aa8.15□□□□□ -1.1
NUP88-212ENST00000576708 ADH1CP00326 375 aa8.15□□□□□ -1.1
NUP88-212ENST00000576708 ALDH1B1P30837 517 aa8.15□□□□□ -1.1
NUP88-212ENST00000576708 IARSP41252 1262 aaKnown RBP8.15□□□□□ -1.1
NUP88-212ENST00000576708 PRR20EP86478 221 aa8.15□□□□□ -1.1
NUP88-212ENST00000576708 PRR20CP86479 221 aa8.15□□□□□ -1.1
NUP88-212ENST00000576708 PRR20DP86480 221 aa8.15□□□□□ -1.1
NUP88-212ENST00000576708 PRR20BP86481 221 aa8.15□□□□□ -1.1
NUP88-212ENST00000576708 PRR20AP86496 221 aa8.15□□□□□ -1.1
NUP88-212ENST00000576708 AIMP1Q12904 312 aaKnown RBP8.15□□□□□ -1.1
NUP88-212ENST00000576708 TSGA10IPQ3SY00 556 aa8.15□□□□□ -1.1
NUP88-212ENST00000576708 SLFNL1Q499Z3 407 aa8.15□□□□□ -1.1
NUP88-212ENST00000576708 CRY2Q49AN0 593 aa8.15□□□□□ -1.1
NUP88-212ENST00000576708 JMYQ8N9B5 988 aa8.15□□□□□ -1.1
NUP88-212ENST00000576708 UCN2Q96RP3 112 aa8.15□□□□□ -1.1
NUP88-212ENST00000576708 ARID3AQ99856 593 aa8.15□□□□□ -1.1
NUP88-212ENST00000576708 NYXQ9GZU5 481 aa8.15□□□□□ -1.1
NUP88-212ENST00000576708 MAP4K5Q9Y4K4 846 aa8.15□□□□□ -1.1
NUP88-212ENST00000576708 LAS1LQ9Y4W2 734 aaKnown RBP8.15□□□□□ -1.1
NUP88-212ENST00000576708 WASF2Q9Y6W5 498 aa8.15□□□□□ -1.1
NUP88-212ENST00000576708 COL4A5P29400 1685 aa8.14□□□□□ -1.11
NUP88-212ENST00000576708 SNED1Q8TER0 1413 aa8.14□□□□□ -1.11
NUP88-212ENST00000576708 MYBBP1AQ9BQG0 1328 aaKnown RBP8.14□□□□□ -1.11
NUP88-212ENST00000576708 NR3C2P08235 984 aa8.14□□□□□ -1.11
NUP88-212ENST00000576708 HOXA10P31260 410 aaPredicted RBP8.14□□□□□ -1.11
NUP88-212ENST00000576708 MCCD1P59942 119 aaPredicted RBP8.14□□□□□ -1.11
NUP88-212ENST00000576708 INTS6LQ5JSJ4 861 aaKnown RBP8.14□□□□□ -1.11
NUP88-212ENST00000576708 COL13A1Q5TAT6 717 aaPredicted RBP8.14□□□□□ -1.11
NUP88-212ENST00000576708 RTKN2Q8IZC4 609 aa8.14□□□□□ -1.11
NUP88-212ENST00000576708 CCDC82Q8N4S0 544 aa8.14□□□□□ -1.11
NUP88-212ENST00000576708 MPNDQ8N594 471 aa8.14□□□□□ -1.11
NUP88-212ENST00000576708 XAGE3Q8WTP9 111 aa8.14□□□□□ -1.11
NUP88-212ENST00000576708 ZNF592Q92610 1267 aa8.14□□□□□ -1.11
NUP88-212ENST00000576708 RPGRQ92834 1020 aaKnown RBP8.14□□□□□ -1.11
NUP88-212ENST00000576708 TAF1DQ9H5J8 278 aaPredicted RBP8.14□□□□□ -1.11
NUP88-212ENST00000576708 CDV3Q9UKY7 258 aaKnown RBP8.14□□□□□ -1.11
NUP88-212ENST00000576708 ERBB4Q15303 1308 aa8.13□□□□□ -1.11
NUP88-212ENST00000576708 RNF123Q5XPI4 1314 aa8.13□□□□□ -1.11
NUP88-212ENST00000576708 ESPNB1AK53 854 aa8.13□□□□□ -1.11
NUP88-212ENST00000576708 GFRA3O60609 400 aa8.13□□□□□ -1.11
NUP88-212ENST00000576708 SMPD1P17405 629 aa8.13□□□□□ -1.11
NUP88-212ENST00000576708 EAPPQ56P03 285 aaPredicted RBP8.13□□□□□ -1.11
NUP88-212ENST00000576708 COPS6Q7L5N1 327 aa8.13□□□□□ -1.11
NUP88-212ENST00000576708 RNF135Q8IUD6 432 aa8.13□□□□□ -1.11
NUP88-212ENST00000576708 MKRN1Q9UHC7 482 aaKnown RBP8.13□□□□□ -1.11
NUP88-212ENST00000576708 ADAMTS8Q9UP79 889 aa8.13□□□□□ -1.11
NUP88-212ENST00000576708 FZD9O00144 591 aa8.12□□□□□ -1.11
NUP88-212ENST00000576708 CHL1O00533 1208 aa8.12□□□□□ -1.11
NUP88-212ENST00000576708 SKIP12755 728 aa8.12□□□□□ -1.11
NUP88-212ENST00000576708 HCLS1P14317 486 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms