RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 GPR108Q9NPR9 543 aa9.71□□□□□ -0.86
CCDC40-215ENST00000576033 PIH1D3Q9NQM4 214 aaKnown RBP9.71□□□□□ -0.86
CCDC40-215ENST00000576033 SSC5DA1L4H1 1573 aa9.71□□□□□ -0.86
CCDC40-215ENST00000576033 WNT10BO00744 389 aa9.7□□□□□ -0.86
CCDC40-215ENST00000576033 MAP4K4O95819 1239 aaPredicted RBP9.7□□□□□ -0.86
CCDC40-215ENST00000576033 CYP2E1P05181 493 aaPredicted RBP9.7□□□□□ -0.86
CCDC40-215ENST00000576033 C1QTNF8P60827 252 aa9.7□□□□□ -0.86
CCDC40-215ENST00000576033 HDAC1Q13547 482 aaPredicted RBP9.7□□□□□ -0.86
CCDC40-215ENST00000576033 PRAMEF18Q5VWM3 479 aa9.7□□□□□ -0.86
CCDC40-215ENST00000576033 CHADLQ6NUI6 762 aa9.7□□□□□ -0.86
CCDC40-215ENST00000576033 SPATA5Q8NB90 893 aa9.7□□□□□ -0.86
CCDC40-215ENST00000576033 ZBED3Q96IU2 234 aaPredicted RBP9.7□□□□□ -0.86
CCDC40-215ENST00000576033 PRMT6Q96LA8 375 aaPredicted RBP9.7□□□□□ -0.86
CCDC40-215ENST00000576033 ABCF2Q9UG63 623 aa9.7□□□□□ -0.86
CCDC40-215ENST00000576033 FZD1Q9UP38 647 aa9.7□□□□□ -0.86
CCDC40-215ENST00000576033 MYO3BQ8WXR4 1341 aa9.7□□□□□ -0.86
CCDC40-215ENST00000576033 PAPPA2Q9BXP8 1791 aa9.7□□□□□ -0.86
CCDC40-215ENST00000576033 SIPA1L1O43166 1804 aa9.7□□□□□ -0.86
CCDC40-215ENST00000576033 FOCADQ5VW36 1801 aa9.7□□□□□ -0.86
CCDC40-215ENST00000576033 RAB11FIP3O75154 756 aa9.69□□□□□ -0.86
CCDC40-215ENST00000576033 CRKP46108 304 aa9.69□□□□□ -0.86
CCDC40-215ENST00000576033 RBM5P52756 815 aaKnown RBP eCLIP9.69□□□□□ -0.86
CCDC40-215ENST00000576033 AAMPQ13685 434 aa9.69□□□□□ -0.86
CCDC40-215ENST00000576033 DDX60LQ5H9U9 1706 aaKnown RBP9.69□□□□□ -0.86
CCDC40-215ENST00000576033 USP50Q70EL3 339 aaPredicted RBP9.69□□□□□ -0.86
CCDC40-215ENST00000576033 ADGRA1Q86SQ6 560 aa9.69□□□□□ -0.86
CCDC40-215ENST00000576033 USP48Q86UV5 1035 aa9.69□□□□□ -0.86
CCDC40-215ENST00000576033 CLASRPQ8N2M8 674 aaKnown RBP9.69□□□□□ -0.86
CCDC40-215ENST00000576033 RBM46Q8TBY0 533 aaKnown RBP9.69□□□□□ -0.86
CCDC40-215ENST00000576033 CCDC136Q96JN2 1154 aa9.69□□□□□ -0.86
CCDC40-215ENST00000576033 DNAJC2Q99543 621 aaKnown RBP9.69□□□□□ -0.86
CCDC40-215ENST00000576033 SALL3Q9BXA9 1300 aa9.69□□□□□ -0.86
CCDC40-215ENST00000576033 LNPKQ9C0E8 428 aa9.69□□□□□ -0.86
CCDC40-215ENST00000576033 BOLA2Q9H3K6 86 aa9.69□□□□□ -0.86
CCDC40-215ENST00000576033 DENND2AQ9ULE3 1009 aa9.69□□□□□ -0.86
CCDC40-215ENST00000576033 PASKQ96RG2 1323 aa9.68□□□□□ -0.86
CCDC40-215ENST00000576033 SPDYE2BA6NHP3 402 aa9.68□□□□□ -0.86
CCDC40-215ENST00000576033 ITGBL1O95965 494 aaPredicted RBP9.68□□□□□ -0.86
CCDC40-215ENST00000576033 IFIT2P09913 472 aaKnown RBP9.68□□□□□ -0.86
CCDC40-215ENST00000576033 SPDYE6P0CI01 402 aa9.68□□□□□ -0.86
CCDC40-215ENST00000576033 SLURP2P0DP57 97 aa9.68□□□□□ -0.86
CCDC40-215ENST00000576033 FKBP1AP62942 108 aaKnown RBP9.68□□□□□ -0.86
CCDC40-215ENST00000576033 MECOMQ03112 1051 aa9.68□□□□□ -0.86
CCDC40-215ENST00000576033 HSP90AB4PQ58FF6 505 aa9.68□□□□□ -0.86
CCDC40-215ENST00000576033 ANKRD45Q5TZF3 282 aa9.68□□□□□ -0.86
CCDC40-215ENST00000576033 CNTROBQ8N137 903 aa9.68□□□□□ -0.86
CCDC40-215ENST00000576033 SMC1BQ8NDV3 1235 aa9.68□□□□□ -0.86
CCDC40-215ENST00000576033 TDRD3Q9H7E2 651 aaKnown RBP9.68□□□□□ -0.86
CCDC40-215ENST00000576033 ZNF408Q9H9D4 720 aa9.68□□□□□ -0.86
CCDC40-215ENST00000576033 DAGLAQ9Y4D2 1042 aa9.68□□□□□ -0.86
CCDC40-215ENST00000576033 AK9Q5TCS8 1911 aa9.68□□□□□ -0.86
CCDC40-215ENST00000576033 NAV1Q8NEY1 1877 aa9.68□□□□□ -0.86
CCDC40-215ENST00000576033 CNTNAP1P78357 1384 aa9.67□□□□□ -0.86
CCDC40-215ENST00000576033 SALL1Q9NSC2 1324 aa9.67□□□□□ -0.86
CCDC40-215ENST00000576033 GOLIM4O00461 696 aa9.67□□□□□ -0.86
CCDC40-215ENST00000576033 SEMA3EO15041 775 aa9.67□□□□□ -0.86
CCDC40-215ENST00000576033 LDHBP07195 334 aaKnown RBP9.67□□□□□ -0.86
CCDC40-215ENST00000576033 PDE4AP27815 886 aa9.67□□□□□ -0.86
CCDC40-215ENST00000576033 CCDC158Q5M9N0 1113 aa9.67□□□□□ -0.86
CCDC40-215ENST00000576033 APOBEC3HQ6NTF7 200 aaKnown RBP9.67□□□□□ -0.86
CCDC40-215ENST00000576033 MOB2Q70IA6 237 aa9.67□□□□□ -0.86
CCDC40-215ENST00000576033 PNMA8AQ86V59 439 aaPredicted RBP9.67□□□□□ -0.86
CCDC40-215ENST00000576033 SMC5Q8IY18 1101 aa9.67□□□□□ -0.86
CCDC40-215ENST00000576033 WDR66Q8TBY9 1149 aa9.67□□□□□ -0.86
CCDC40-215ENST00000576033 VEZTQ9HBM0 779 aa9.67□□□□□ -0.86
CCDC40-215ENST00000576033 TSHZ2Q9NRE2 1034 aa9.67□□□□□ -0.86
CCDC40-215ENST00000576033 GNL3LQ9NVN8 582 aaKnown RBP9.67□□□□□ -0.86
CCDC40-215ENST00000576033 RFX7Q2KHR2 1363 aa9.66□□□□□ -0.86
CCDC40-215ENST00000576033 PDS5AQ29RF7 1337 aaKnown RBP9.66□□□□□ -0.86
CCDC40-215ENST00000576033 TCP10L2B9ZVM9 353 aa9.66□□□□□ -0.86
CCDC40-215ENST00000576033 UQCRFS1P1P0C7P4 283 aa9.66□□□□□ -0.86
CCDC40-215ENST00000576033 NFIAQ12857 509 aa9.66□□□□□ -0.86
CCDC40-215ENST00000576033 DLGAP5Q15398 846 aa9.66□□□□□ -0.86
CCDC40-215ENST00000576033 KRT26Q7Z3Y9 468 aa9.66□□□□□ -0.86
CCDC40-215ENST00000576033 DZIP1Q86YF9 867 aaKnown RBP9.66□□□□□ -0.86
CCDC40-215ENST00000576033 OGFOD1Q8N543 542 aa9.66□□□□□ -0.86
CCDC40-215ENST00000576033 PI4K2BQ8TCG2 481 aa9.66□□□□□ -0.86
CCDC40-215ENST00000576033 TBC1D22AQ8WUA7 517 aa9.66□□□□□ -0.86
CCDC40-215ENST00000576033 NSUN4Q96CB9 384 aaKnown RBP9.66□□□□□ -0.86
CCDC40-215ENST00000576033 RAI14Q9P0K7 980 aa9.66□□□□□ -0.86
CCDC40-215ENST00000576033 ZNF70Q9UC06 446 aaPredicted RBP9.66□□□□□ -0.86
CCDC40-215ENST00000576033 PGAP2Q9UHJ9 254 aa9.66□□□□□ -0.86
CCDC40-215ENST00000576033 MROH7-TTC4A0A0A0MT08 1334 aa9.65□□□□□ -0.86
CCDC40-215ENST00000576033 IDH1O75874 414 aaKnown RBP9.65□□□□□ -0.86
CCDC40-215ENST00000576033 DYNLL1P63167 89 aaKnown RBP9.65□□□□□ -0.86
CCDC40-215ENST00000576033 FSTL1Q12841 308 aa9.65□□□□□ -0.86
CCDC40-215ENST00000576033 SPDYE2Q495Y8 402 aa9.65□□□□□ -0.86
CCDC40-215ENST00000576033 CST9Q5W186 159 aa9.65□□□□□ -0.86
CCDC40-215ENST00000576033 ZFPM1Q8IX07 1006 aa9.65□□□□□ -0.86
CCDC40-215ENST00000576033 TEKT1Q969V4 418 aa9.65□□□□□ -0.86
CCDC40-215ENST00000576033 CDCA5Q96FF9 252 aa9.65□□□□□ -0.86
CCDC40-215ENST00000576033 ZNF512BQ96KM6 892 aaPredicted RBP9.65□□□□□ -0.86
CCDC40-215ENST00000576033 TMEM39BQ9GZU3 492 aa9.65□□□□□ -0.86
CCDC40-215ENST00000576033 SERPINA10Q9UK55 444 aa9.65□□□□□ -0.86
CCDC40-215ENST00000576033 HDAC9Q9UKV0 1011 aa9.65□□□□□ -0.86
CCDC40-215ENST00000576033 GAKO14976 1311 aa9.64□□□□□ -0.87
CCDC40-215ENST00000576033 MX1P20591 662 aa9.64□□□□□ -0.87
CCDC40-215ENST00000576033 BTDP43251 543 aa9.64□□□□□ -0.87
CCDC40-215ENST00000576033 NUCB1Q02818 461 aa9.64□□□□□ -0.87
CCDC40-215ENST00000576033 EVX2Q03828 476 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms