RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 COPS6Q7L5N1 327 aa16.73■□□□□ 0.27
SCARF1-209ENST00000576012 CCDC82Q8N4S0 544 aa16.73■□□□□ 0.27
SCARF1-209ENST00000576012 MYSM1Q5VVJ2 828 aa16.72■□□□□ 0.27
SCARF1-209ENST00000576012 GRAMD1CQ8IYS0 662 aa16.72■□□□□ 0.27
SCARF1-209ENST00000576012 XAGE3Q8WTP9 111 aa16.72■□□□□ 0.27
SCARF1-209ENST00000576012 ADAMTS13Q76LX8 1427 aa16.72■□□□□ 0.27
SCARF1-209ENST00000576012 PHLPP2Q6ZVD8 1323 aa16.72■□□□□ 0.27
SCARF1-209ENST00000576012 UBE2Q2LH0YL09 131 aa16.72■□□□□ 0.27
SCARF1-209ENST00000576012 ZSCAN12O43309 604 aa16.72■□□□□ 0.27
SCARF1-209ENST00000576012 CDC27P30260 824 aa16.72■□□□□ 0.27
SCARF1-209ENST00000576012 PDE4BQ07343 736 aa16.72■□□□□ 0.27
SCARF1-209ENST00000576012 NEXNQ0ZGT2 675 aa16.72■□□□□ 0.27
SCARF1-209ENST00000576012 C1orf141Q5JVX7 400 aa16.72■□□□□ 0.27
SCARF1-209ENST00000576012 LEKR1Q6ZMV7 388 aa16.72■□□□□ 0.27
SCARF1-209ENST00000576012 FUT8Q9BYC5 575 aa16.72■□□□□ 0.27
SCARF1-209ENST00000576012 FAN1Q9Y2M0 1017 aa16.72■□□□□ 0.27
SCARF1-209ENST00000576012 MYL5Q02045 173 aa16.72■□□□□ 0.27
SCARF1-209ENST00000576012 OLFM4Q6UX06 510 aa16.72■□□□□ 0.27
SCARF1-209ENST00000576012 HSD3B7Q9H2F3 369 aa16.72■□□□□ 0.27
SCARF1-209ENST00000576012 RTEL1Q9NZ71 1219 aa16.72■□□□□ 0.27
SCARF1-209ENST00000576012 DENND2AQ9ULE3 1009 aa16.72■□□□□ 0.27
SCARF1-209ENST00000576012 IRX3P78415 501 aaPredicted RBP16.71■□□□□ 0.27
SCARF1-209ENST00000576012 PHKBQ93100 1093 aa16.71■□□□□ 0.27
SCARF1-209ENST00000576012 SOWAHDA6NJG2 315 aa16.71■□□□□ 0.27
SCARF1-209ENST00000576012 USPL1Q5W0Q7 1092 aa16.71■□□□□ 0.27
SCARF1-209ENST00000576012 STX17P56962 302 aa16.71■□□□□ 0.26
SCARF1-209ENST00000576012 ESCO1Q5FWF5 840 aa16.71■□□□□ 0.26
SCARF1-209ENST00000576012 ANO1Q5XXA6 986 aa16.71■□□□□ 0.26
SCARF1-209ENST00000576012 MRPL44Q9H9J2 332 aaKnown RBP16.71■□□□□ 0.26
SCARF1-209ENST00000576012 DDX58O95786 925 aaKnown RBP16.7■□□□□ 0.26
SCARF1-209ENST00000576012 GPR161Q8N6U8 529 aaKnown RBP16.7■□□□□ 0.26
SCARF1-209ENST00000576012 KCNG4Q8TDN1 519 aa16.7■□□□□ 0.26
SCARF1-209ENST00000576012 LLPHQ9BRT6 129 aaKnown RBP16.7■□□□□ 0.26
SCARF1-209ENST00000576012 CWC15Q9P013 229 aaKnown RBP16.7■□□□□ 0.26
SCARF1-209ENST00000576012 XRN1Q8IZH2 1706 aaKnown RBP16.7■□□□□ 0.26
SCARF1-209ENST00000576012 HSPD1P10809 573 aaKnown RBP16.7■□□□□ 0.26
SCARF1-209ENST00000576012 CHRM1P11229 460 aaPredicted RBP16.7■□□□□ 0.26
SCARF1-209ENST00000576012 TSGA10IPQ3SY00 556 aa16.7■□□□□ 0.26
SCARF1-209ENST00000576012 CNNM3Q8NE01 707 aa16.7■□□□□ 0.26
SCARF1-209ENST00000576012 DRC1Q96MC2 740 aa16.7■□□□□ 0.26
SCARF1-209ENST00000576012 PCDHA5Q9Y5H7 936 aa16.7■□□□□ 0.26
SCARF1-209ENST00000576012 GOLGA1Q92805 767 aa16.69■□□□□ 0.26
SCARF1-209ENST00000576012 ZNF594Q96JF6 807 aaPredicted RBP16.69■□□□□ 0.26
SCARF1-209ENST00000576012 MYL10Q9BUA6 226 aa16.69■□□□□ 0.26
SCARF1-209ENST00000576012 ATP5JP18859 108 aa16.69■□□□□ 0.26
SCARF1-209ENST00000576012 FAM193AP78312 1265 aa16.69■□□□□ 0.26
SCARF1-209ENST00000576012 KIF4BQ2VIQ3 1234 aa16.69■□□□□ 0.26
SCARF1-209ENST00000576012 INTS13Q9NVM9 706 aa16.69■□□□□ 0.26
SCARF1-209ENST00000576012 NRKQ7Z2Y5 1582 aa16.69■□□□□ 0.26
SCARF1-209ENST00000576012 CCP110O43303 1012 aa16.69■□□□□ 0.26
SCARF1-209ENST00000576012 DHX16O60231 1041 aaKnown RBP16.69■□□□□ 0.26
SCARF1-209ENST00000576012 CHMP4BP1P59074 171 aa16.69■□□□□ 0.26
SCARF1-209ENST00000576012 JAKMIP3Q5VZ66 844 aa16.69■□□□□ 0.26
SCARF1-209ENST00000576012 VSTM4Q8IW00 320 aa16.69■□□□□ 0.26
SCARF1-209ENST00000576012 ALDH8A1Q9H2A2 487 aaPredicted RBP16.69■□□□□ 0.26
SCARF1-209ENST00000576012 GTF2A1P52655 376 aaPredicted RBP16.68■□□□□ 0.26
SCARF1-209ENST00000576012 SART3Q15020 963 aaKnown RBP16.68■□□□□ 0.26
SCARF1-209ENST00000576012 E2F4Q16254 413 aa16.68■□□□□ 0.26
SCARF1-209ENST00000576012 ZNF569Q5MCW4 686 aa16.68■□□□□ 0.26
SCARF1-209ENST00000576012 FOXP4Q8IVH2 680 aaPredicted RBP16.68■□□□□ 0.26
SCARF1-209ENST00000576012 RGS22Q8NE09 1264 aa16.68■□□□□ 0.26
SCARF1-209ENST00000576012 PNKPQ96T60 521 aa16.68■□□□□ 0.26
SCARF1-209ENST00000576012 USP31Q70CQ4 1352 aa16.68■□□□□ 0.26
SCARF1-209ENST00000576012 NEDD4P46934 1319 aa16.68■□□□□ 0.26
SCARF1-209ENST00000576012 MAP3K9P80192 1104 aa16.68■□□□□ 0.26
SCARF1-209ENST00000576012 LMBR1LQ6UX01 489 aa16.68■□□□□ 0.26
SCARF1-209ENST00000576012 SRLQ86TD4 932 aa16.68■□□□□ 0.26
SCARF1-209ENST00000576012 GPATCH11Q8N954 259 aa16.68■□□□□ 0.26
SCARF1-209ENST00000576012 SRRTQ9BXP5 876 aaKnown RBP16.68■□□□□ 0.26
SCARF1-209ENST00000576012 TSPYL1Q9H0U9 437 aa16.68■□□□□ 0.26
SCARF1-209ENST00000576012 SAMSN1Q9NSI8 373 aaKnown RBP16.68■□□□□ 0.26
SCARF1-209ENST00000576012 NFE2L3Q9Y4A8 694 aa16.68■□□□□ 0.26
SCARF1-209ENST00000576012 MRFAP1Q9Y605 127 aa16.68■□□□□ 0.26
SCARF1-209ENST00000576012 A0A087WZG4 1122 aa16.67■□□□□ 0.26
SCARF1-209ENST00000576012 ARHGAP6O43182 974 aa16.67■□□□□ 0.26
SCARF1-209ENST00000576012 PTPN12Q05209 780 aaKnown RBP16.67■□□□□ 0.26
SCARF1-209ENST00000576012 FBXO18Q8NFZ0 1043 aa16.67■□□□□ 0.26
SCARF1-209ENST00000576012 ABCB6Q9NP58 842 aa16.67■□□□□ 0.26
SCARF1-209ENST00000576012 PAG1Q9NWQ8 432 aa16.67■□□□□ 0.26
SCARF1-209ENST00000576012 CBFA2T2O43439 604 aa16.67■□□□□ 0.26
SCARF1-209ENST00000576012 PRC1O43663 620 aa16.67■□□□□ 0.26
SCARF1-209ENST00000576012 AXDND1Q5T1B0 1012 aaPredicted RBP16.67■□□□□ 0.26
SCARF1-209ENST00000576012 MICU3Q86XE3 530 aa16.67■□□□□ 0.26
SCARF1-209ENST00000576012 ADGRL3Q9HAR2 1447 aa16.67■□□□□ 0.26
SCARF1-209ENST00000576012 NEURL1BA8MQ27 555 aa16.67■□□□□ 0.26
SCARF1-209ENST00000576012 ABL1P00519 1130 aa16.67■□□□□ 0.26
SCARF1-209ENST00000576012 ACTN2P35609 894 aa16.67■□□□□ 0.26
SCARF1-209ENST00000576012 EXOSC10Q01780 885 aaKnown RBP16.67■□□□□ 0.26
SCARF1-209ENST00000576012 GCKRQ14397 625 aa16.67■□□□□ 0.26
SCARF1-209ENST00000576012 SHC4Q6S5L8 630 aa16.67■□□□□ 0.26
SCARF1-209ENST00000576012 HDAC5Q9UQL6 1122 aa16.67■□□□□ 0.26
SCARF1-209ENST00000576012 ZNF330Q9Y3S2 320 aaPredicted RBP16.67■□□□□ 0.26
SCARF1-209ENST00000576012 SLIT1O75093 1534 aa16.67■□□□□ 0.26
SCARF1-209ENST00000576012 TPM1P09493 284 aa16.66■□□□□ 0.26
SCARF1-209ENST00000576012 CASP1P29466 404 aa16.66■□□□□ 0.26
SCARF1-209ENST00000576012 PSME1Q06323 249 aa16.66■□□□□ 0.26
SCARF1-209ENST00000576012 KBTBD3Q8NAB2 608 aa16.66■□□□□ 0.26
SCARF1-209ENST00000576012 MPHOSPH8Q99549 860 aa16.66■□□□□ 0.26
SCARF1-209ENST00000576012 A0A1W2PQ27 194 aa16.66■□□□□ 0.26
SCARF1-209ENST00000576012 A0A1W2PQ64 194 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms