RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 GRIK5Q16478 980 aa16.37■□□□□ 0.21
RPAIN-216ENST00000575599 XAGE2Q96GT9 111 aa16.37■□□□□ 0.21
RPAIN-216ENST00000575599 CHMP4BQ9H444 224 aaKnown RBP16.37■□□□□ 0.21
RPAIN-216ENST00000575599 ZBTB40Q9NUA8 1239 aa16.37■□□□□ 0.21
RPAIN-216ENST00000575599 PITPNM2Q9BZ72 1349 aa16.36■□□□□ 0.21
RPAIN-216ENST00000575599 CNTNAP1P78357 1384 aa16.36■□□□□ 0.21
RPAIN-216ENST00000575599 CCDC102BQ68D86 513 aa16.36■□□□□ 0.21
RPAIN-216ENST00000575599 SUPT16HQ9Y5B9 1047 aaKnown RBP16.36■□□□□ 0.21
RPAIN-216ENST00000575599 GORABQ5T7V8 394 aa16.35■□□□□ 0.21
RPAIN-216ENST00000575599 PAXIP1Q6ZW49 1069 aaPredicted RBP16.35■□□□□ 0.21
RPAIN-216ENST00000575599 CDCA5Q96FF9 252 aa16.35■□□□□ 0.21
RPAIN-216ENST00000575599 ZBED3Q96IU2 234 aaPredicted RBP16.35■□□□□ 0.21
RPAIN-216ENST00000575599 ECM29Q5VYK3 1845 aa16.34■□□□□ 0.21
RPAIN-216ENST00000575599 CLRN2A0PK11 232 aa16.34■□□□□ 0.21
RPAIN-216ENST00000575599 MYO1BO43795 1136 aa16.34■□□□□ 0.21
RPAIN-216ENST00000575599 NEFLP07196 543 aa16.34■□□□□ 0.21
RPAIN-216ENST00000575599 RRP1P56182 461 aaKnown RBP16.34■□□□□ 0.21
RPAIN-216ENST00000575599 APOBEC3FQ8IUX4 373 aaKnown RBP16.34■□□□□ 0.21
RPAIN-216ENST00000575599 MTMR14Q8NCE2 650 aa16.34■□□□□ 0.21
RPAIN-216ENST00000575599 WDR66Q8TBY9 1149 aa16.34■□□□□ 0.21
RPAIN-216ENST00000575599 DENND2AQ9ULE3 1009 aa16.34■□□□□ 0.21
RPAIN-216ENST00000575599 EXOC6BQ9Y2D4 811 aa16.34■□□□□ 0.21
RPAIN-216ENST00000575599 NOP58Q9Y2X3 529 aaKnown RBP16.34■□□□□ 0.21
RPAIN-216ENST00000575599 TLL2Q9Y6L7 1015 aa16.34■□□□□ 0.21
RPAIN-216ENST00000575599 RASSF10A6NK89 507 aa16.33■□□□□ 0.2
RPAIN-216ENST00000575599 SEMA3EO15041 775 aa16.33■□□□□ 0.2
RPAIN-216ENST00000575599 CRKP46108 304 aa16.33■□□□□ 0.2
RPAIN-216ENST00000575599 RASGRF1Q13972 1273 aa16.33■□□□□ 0.2
RPAIN-216ENST00000575599 DEFB115Q30KQ5 88 aa16.33■□□□□ 0.2
RPAIN-216ENST00000575599 TNNI3KQ59H18 835 aa16.33■□□□□ 0.2
RPAIN-216ENST00000575599 RPAP2Q8IXW5 612 aaPredicted RBP16.33■□□□□ 0.2
RPAIN-216ENST00000575599 PRMT6Q96LA8 375 aaPredicted RBP16.33■□□□□ 0.2
RPAIN-216ENST00000575599 VEZTQ9HBM0 779 aa16.33■□□□□ 0.2
RPAIN-216ENST00000575599 SERPINA10Q9UK55 444 aa16.33■□□□□ 0.2
RPAIN-216ENST00000575599 FPGT-TNNI3KV9GXZ4 949 aa16.33■□□□□ 0.2
RPAIN-216ENST00000575599 AOX1Q06278 1338 aa16.33■□□□□ 0.2
RPAIN-216ENST00000575599 HMMRO75330 724 aa16.32■□□□□ 0.2
RPAIN-216ENST00000575599 GRM1Q13255 1194 aa16.32■□□□□ 0.2
RPAIN-216ENST00000575599 PRAMEF18Q5VWM3 479 aa16.32■□□□□ 0.2
RPAIN-216ENST00000575599 GBA2Q9HCG7 927 aaPredicted RBP16.32■□□□□ 0.2
RPAIN-216ENST00000575599 MAST3O60307 1309 aa16.32■□□□□ 0.2
RPAIN-216ENST00000575599 VEGFBP49765 207 aa16.31■□□□□ 0.2
RPAIN-216ENST00000575599 SAPCD2Q86UD0 394 aa16.31■□□□□ 0.2
RPAIN-216ENST00000575599 TEKT1Q969V4 418 aa16.31■□□□□ 0.2
RPAIN-216ENST00000575599 SUGT1Q9Y2Z0 365 aa16.31■□□□□ 0.2
RPAIN-216ENST00000575599 APBB1O00213 710 aa16.3■□□□□ 0.2
RPAIN-216ENST00000575599 PRDX5P30044 214 aa16.3■□□□□ 0.2
RPAIN-216ENST00000575599 ERC1Q8IUD2 1116 aa16.3■□□□□ 0.2
RPAIN-216ENST00000575599 SIRT2Q8IXJ6 389 aa16.3■□□□□ 0.2
RPAIN-216ENST00000575599 C2orf69Q8N8R5 385 aa16.3■□□□□ 0.2
RPAIN-216ENST00000575599 JMYQ8N9B5 988 aa16.3■□□□□ 0.2
RPAIN-216ENST00000575599 DBNDD2Q9BQY9 259 aa16.3■□□□□ 0.2
RPAIN-216ENST00000575599 TDRD3Q9H7E2 651 aaKnown RBP16.3■□□□□ 0.2
RPAIN-216ENST00000575599 GPR108Q9NPR9 543 aa16.3■□□□□ 0.2
RPAIN-216ENST00000575599 SALL1Q9NSC2 1324 aa16.29■□□□□ 0.2
RPAIN-216ENST00000575599 LDHBP07195 334 aaKnown RBP16.29■□□□□ 0.2
RPAIN-216ENST00000575599 HUNKP57058 714 aa16.29■□□□□ 0.2
RPAIN-216ENST00000575599 HSP90AB4PQ58FF6 505 aa16.29■□□□□ 0.2
RPAIN-216ENST00000575599 CYP4F22Q6NT55 531 aa16.29■□□□□ 0.2
RPAIN-216ENST00000575599 ABCF2Q9UG63 623 aa16.29■□□□□ 0.2
RPAIN-216ENST00000575599 HDLBPQ00341 1268 aaKnown RBP16.28■□□□□ 0.2
RPAIN-216ENST00000575599 DIXDC1Q155Q3 683 aa16.28■□□□□ 0.2
RPAIN-216ENST00000575599 TTC39AQ5SRH9 613 aa16.28■□□□□ 0.2
RPAIN-216ENST00000575599 PI16Q6UXB8 463 aa16.28■□□□□ 0.2
RPAIN-216ENST00000575599 ZGPATQ8N5A5 531 aaKnown RBP16.28■□□□□ 0.2
RPAIN-216ENST00000575599 CAPNS2Q96L46 248 aa16.28■□□□□ 0.2
RPAIN-216ENST00000575599 CCDC8Q9H0W5 538 aaPredicted RBP16.28■□□□□ 0.2
RPAIN-216ENST00000575599 BCL11AQ9H165 835 aa16.28■□□□□ 0.2
RPAIN-216ENST00000575599 DEFB129Q9H1M3 183 aa16.28■□□□□ 0.2
RPAIN-216ENST00000575599 TLR7Q9NYK1 1049 aaKnown RBP16.28■□□□□ 0.2
RPAIN-216ENST00000575599 ZNF70Q9UC06 446 aaPredicted RBP16.28■□□□□ 0.2
RPAIN-216ENST00000575599 PAPPA2Q9BXP8 1791 aa16.28■□□□□ 0.2
RPAIN-216ENST00000575599 PDS5AQ29RF7 1337 aaKnown RBP16.28■□□□□ 0.2
RPAIN-216ENST00000575599 WDR33Q9C0J8 1336 aaKnown RBP16.28■□□□□ 0.2
RPAIN-216ENST00000575599 UQCRFS1P1P0C7P4 283 aa16.27■□□□□ 0.2
RPAIN-216ENST00000575599 ARID4AP29374 1257 aaPredicted RBP16.27■□□□□ 0.2
RPAIN-216ENST00000575599 NF2P35240 595 aa16.27■□□□□ 0.2
RPAIN-216ENST00000575599 ECE1P42892 770 aa16.27■□□□□ 0.2
RPAIN-216ENST00000575599 TTLL12Q14166 644 aaPredicted RBP16.27■□□□□ 0.2
RPAIN-216ENST00000575599 CCDC158Q5M9N0 1113 aa16.27■□□□□ 0.2
RPAIN-216ENST00000575599 SPATA5Q8NB90 893 aa16.27■□□□□ 0.2
RPAIN-216ENST00000575599 EAF2Q96CJ1 260 aaPredicted RBP16.27■□□□□ 0.2
RPAIN-216ENST00000575599 ZDHHC15Q96MV8 337 aa16.27■□□□□ 0.2
RPAIN-216ENST00000575599 IL1RAPL2Q9NP60 686 aa16.27■□□□□ 0.2
RPAIN-216ENST00000575599 HMG20BQ9P0W2 317 aa16.27■□□□□ 0.2
RPAIN-216ENST00000575599 DBNLQ9UJU6 430 aaKnown RBP16.27■□□□□ 0.2
RPAIN-216ENST00000575599 TCP10L2B9ZVM9 353 aa16.26■□□□□ 0.19
RPAIN-216ENST00000575599 MCAMP43121 646 aa16.26■□□□□ 0.19
RPAIN-216ENST00000575599 TNFAIP1Q13829 316 aa16.26■□□□□ 0.19
RPAIN-216ENST00000575599 HHIPL2Q6UWX4 724 aa16.26■□□□□ 0.19
RPAIN-216ENST00000575599 MOB2Q70IA6 237 aa16.26■□□□□ 0.19
RPAIN-216ENST00000575599 AACSQ86V21 672 aa16.26■□□□□ 0.19
RPAIN-216ENST00000575599 DZIP1Q86YF9 867 aaKnown RBP16.26■□□□□ 0.19
RPAIN-216ENST00000575599 RHPN1Q8TCX5 695 aa16.26■□□□□ 0.19
RPAIN-216ENST00000575599 CACNB3P54284 484 aa16.26■□□□□ 0.19
RPAIN-216ENST00000575599 PRKG1Q13976 671 aa16.26■□□□□ 0.19
RPAIN-216ENST00000575599 RASA3Q14644 834 aa16.26■□□□□ 0.19
RPAIN-216ENST00000575599 APOBEC3HQ6NTF7 200 aaKnown RBP16.26■□□□□ 0.19
RPAIN-216ENST00000575599 KIF1BPQ96EK5 621 aa16.26■□□□□ 0.19
RPAIN-216ENST00000575599 HHIPL1Q96JK4 782 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms