RNA–Protein interactions for RNA: ENST00000574662.1

SMPD3-212, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-212ENST00000574662 SALL1Q9NSC2 1324 aa19.1■□□□□ 0.65
SMPD3-212ENST00000574662 MYO5AQ9Y4I1 1855 aaKnown RBP19.1■□□□□ 0.65
SMPD3-212ENST00000574662 RNF113AO15541 343 aaKnown RBP19.1■□□□□ 0.65
SMPD3-212ENST00000574662 PRDX5P30044 214 aa19.1■□□□□ 0.65
SMPD3-212ENST00000574662 NMIQ13287 307 aaPredicted RBP19.1■□□□□ 0.65
SMPD3-212ENST00000574662 SLC9C2Q5TAH2 1124 aa19.1■□□□□ 0.65
SMPD3-212ENST00000574662 CERS5Q8N5B7 392 aa19.1■□□□□ 0.65
SMPD3-212ENST00000574662 GOLGA6L22H0YM25 854 aa19.09■□□□□ 0.65
SMPD3-212ENST00000574662 GPR162Q16538 588 aa19.09■□□□□ 0.65
SMPD3-212ENST00000574662 MFSD14BQ5SR56 506 aa19.09■□□□□ 0.65
SMPD3-212ENST00000574662 CWC27Q6UX04 472 aaKnown RBP19.09■□□□□ 0.65
SMPD3-212ENST00000574662 NIM1KQ8IY84 436 aa19.09■□□□□ 0.65
SMPD3-212ENST00000574662 GZF1Q9H116 711 aaPredicted RBP19.09■□□□□ 0.65
SMPD3-212ENST00000574662 RAI14Q9P0K7 980 aa19.09■□□□□ 0.65
SMPD3-212ENST00000574662 ZNRF3Q9ULT6 936 aa19.09■□□□□ 0.65
SMPD3-212ENST00000574662 AK9Q5TCS8 1911 aa19.09■□□□□ 0.65
SMPD3-212ENST00000574662 SCN9AQ15858 1988 aa19.09■□□□□ 0.65
SMPD3-212ENST00000574662 PDE6AP16499 860 aa19.09■□□□□ 0.65
SMPD3-212ENST00000574662 ADD2P35612 726 aa19.09■□□□□ 0.65
SMPD3-212ENST00000574662 DACT2Q5SW24 774 aa19.09■□□□□ 0.65
SMPD3-212ENST00000574662 CLEC17AQ6ZS10 378 aa19.09■□□□□ 0.65
SMPD3-212ENST00000574662 SEC62Q99442 399 aaKnown RBP19.09■□□□□ 0.65
SMPD3-212ENST00000574662 DIAPH3Q9NSV4 1193 aa19.09■□□□□ 0.65
SMPD3-212ENST00000574662 MYH13Q9UKX3 1938 aa19.08■□□□□ 0.65
SMPD3-212ENST00000574662 A0A0D9SFI3 127 aa19.08■□□□□ 0.64
SMPD3-212ENST00000574662 TCRBV5S4A2TA0A5A2 114 aa19.08■□□□□ 0.64
SMPD3-212ENST00000574662 USP17L3A6NCW0 530 aa19.08■□□□□ 0.64
SMPD3-212ENST00000574662 USP17L4A6NCW7 530 aa19.08■□□□□ 0.64
SMPD3-212ENST00000574662 RAD17O75943 681 aa19.08■□□□□ 0.64
SMPD3-212ENST00000574662 MAP3K12Q12852 859 aa19.08■□□□□ 0.64
SMPD3-212ENST00000574662 STRIP1Q5VSL9 837 aa19.08■□□□□ 0.64
SMPD3-212ENST00000574662 USP17L1Q7RTZ2 530 aa19.08■□□□□ 0.64
SMPD3-212ENST00000574662 MAGEB6Q8N7X4 407 aa19.08■□□□□ 0.64
SMPD3-212ENST00000574662 CD2BP2O95400 341 aaKnown RBP19.07■□□□□ 0.64
SMPD3-212ENST00000574662 MECOMQ03112 1051 aa19.07■□□□□ 0.64
SMPD3-212ENST00000574662 ZMYM1Q5SVZ6 1142 aa19.07■□□□□ 0.64
SMPD3-212ENST00000574662 TICAM2Q86XR7 235 aa19.07■□□□□ 0.64
SMPD3-212ENST00000574662 TBC1D22AQ8WUA7 517 aa19.07■□□□□ 0.64
SMPD3-212ENST00000574662 JDP2Q8WYK2 163 aa19.07■□□□□ 0.64
SMPD3-212ENST00000574662 OSBP2Q969R2 916 aa19.07■□□□□ 0.64
SMPD3-212ENST00000574662 ESYT1Q9BSJ8 1104 aa19.07■□□□□ 0.64
SMPD3-212ENST00000574662 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.07■□□□□ 0.64
SMPD3-212ENST00000574662 ZNF532Q9HCE3 1301 aa19.07■□□□□ 0.64
SMPD3-212ENST00000574662 HIP1O00291 1037 aa19.06■□□□□ 0.64
SMPD3-212ENST00000574662 LDHBP07195 334 aaKnown RBP19.06■□□□□ 0.64
SMPD3-212ENST00000574662 SPTY2D1Q68D10 685 aaPredicted RBP19.06■□□□□ 0.64
SMPD3-212ENST00000574662 ZGPATQ8N5A5 531 aaKnown RBP19.06■□□□□ 0.64
SMPD3-212ENST00000574662 NSUN4Q96CB9 384 aaKnown RBP19.06■□□□□ 0.64
SMPD3-212ENST00000574662 RFX7Q2KHR2 1363 aa19.06■□□□□ 0.64
SMPD3-212ENST00000574662 PSMD14O00487 310 aa19.06■□□□□ 0.64
SMPD3-212ENST00000574662 REC8O95072 547 aa19.06■□□□□ 0.64
SMPD3-212ENST00000574662 ZFYP08048 801 aaPredicted RBP19.06■□□□□ 0.64
SMPD3-212ENST00000574662 LMNB1P20700 586 aa19.06■□□□□ 0.64
SMPD3-212ENST00000574662 CXCL9Q07325 125 aa19.06■□□□□ 0.64
SMPD3-212ENST00000574662 USP26Q9BXU7 913 aa19.06■□□□□ 0.64
SMPD3-212ENST00000574662 GRPEL1Q9HAV7 217 aa19.06■□□□□ 0.64
SMPD3-212ENST00000574662 SGSM2O43147 1006 aa19.05■□□□□ 0.64
SMPD3-212ENST00000574662 VIL1P09327 827 aaKnown RBP19.05■□□□□ 0.64
SMPD3-212ENST00000574662 UBE3CQ15386 1083 aa19.05■□□□□ 0.64
SMPD3-212ENST00000574662 ZSCAN25Q6NSZ9 544 aa19.05■□□□□ 0.64
SMPD3-212ENST00000574662 ADGRA1Q86SQ6 560 aa19.05■□□□□ 0.64
SMPD3-212ENST00000574662 DOCK2Q92608 1830 aa19.05■□□□□ 0.64
SMPD3-212ENST00000574662 PUS7LQ9H0K6 701 aaKnown RBP19.05■□□□□ 0.64
SMPD3-212ENST00000574662 CYP7A1P22680 504 aa19.04■□□□□ 0.64
SMPD3-212ENST00000574662 LRRFIP1Q32MZ4 808 aaKnown RBP19.04■□□□□ 0.64
SMPD3-212ENST00000574662 CCDC129Q6ZRS4 1044 aa19.04■□□□□ 0.64
SMPD3-212ENST00000574662 F8W031 263 aaPredicted RBP19.04■□□□□ 0.64
SMPD3-212ENST00000574662 M0R2C6 588 aa19.04■□□□□ 0.64
SMPD3-212ENST00000574662 FZD9O00144 591 aa19.04■□□□□ 0.64
SMPD3-212ENST00000574662 FKBP1AP62942 108 aaKnown RBP19.04■□□□□ 0.64
SMPD3-212ENST00000574662 NUCB2P80303 420 aa19.04■□□□□ 0.64
SMPD3-212ENST00000574662 MCMDC2Q4G0Z9 681 aa19.04■□□□□ 0.64
SMPD3-212ENST00000574662 NAA16Q6N069 864 aaPredicted RBP19.04■□□□□ 0.64
SMPD3-212ENST00000574662 ZNF589Q86UQ0 364 aaPredicted RBP19.04■□□□□ 0.64
SMPD3-212ENST00000574662 APPBP2Q92624 585 aa19.04■□□□□ 0.64
SMPD3-212ENST00000574662 HELLSQ9NRZ9 838 aa19.04■□□□□ 0.64
SMPD3-212ENST00000574662 CCDC88AQ3V6T2 1871 aa19.03■□□□□ 0.64
SMPD3-212ENST00000574662 ZNF646O15015 1829 aaPredicted RBP19.03■□□□□ 0.64
SMPD3-212ENST00000574662 ST18O60284 1047 aa19.03■□□□□ 0.64
SMPD3-212ENST00000574662 DIXDC1Q155Q3 683 aa19.03■□□□□ 0.64
SMPD3-212ENST00000574662 ZBTB12Q9Y330 459 aaPredicted RBP19.03■□□□□ 0.64
SMPD3-212ENST00000574662 MAST3O60307 1309 aa19.02■□□□□ 0.64
SMPD3-212ENST00000574662 YY1P25490 414 aa19.02■□□□□ 0.64
SMPD3-212ENST00000574662 RSBN1LQ6PCB5 846 aaPredicted RBP19.02■□□□□ 0.64
SMPD3-212ENST00000574662 DZIP1Q86YF9 867 aaKnown RBP19.02■□□□□ 0.64
SMPD3-212ENST00000574662 RUFY2Q8WXA3 655 aa19.02■□□□□ 0.64
SMPD3-212ENST00000574662 CWC22Q9HCG8 908 aaKnown RBP19.02■□□□□ 0.64
SMPD3-212ENST00000574662 SUGT1Q9Y2Z0 365 aa19.02■□□□□ 0.64
SMPD3-212ENST00000574662 GRIN3BO60391 1043 aa19.01■□□□□ 0.63
SMPD3-212ENST00000574662 CIAPIN1Q6FI81 312 aa19.01■□□□□ 0.63
SMPD3-212ENST00000574662 KIAA0825Q8IV33 1275 aa19.01■□□□□ 0.63
SMPD3-212ENST00000574662 MIGA1Q8NAN2 632 aa19.01■□□□□ 0.63
SMPD3-212ENST00000574662 GMLQ99445 158 aa19.01■□□□□ 0.63
SMPD3-212ENST00000574662 TTF2Q9UNY4 1162 aaKnown RBP19.01■□□□□ 0.63
SMPD3-212ENST00000574662 SBF1O95248 1867 aa19.01■□□□□ 0.63
SMPD3-212ENST00000574662 C9orf131Q5VYM1 1079 aa19.01■□□□□ 0.63
SMPD3-212ENST00000574662 RNF181Q9P0P0 153 aa19.01■□□□□ 0.63
SMPD3-212ENST00000574662 MYH7P12883 1935 aa19■□□□□ 0.63
SMPD3-212ENST00000574662 SCNN1DP51172 638 aa19■□□□□ 0.63
SMPD3-212ENST00000574662 FOXD4L1Q9NU39 408 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms