RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 BRD3Q15059 726 aa16.58■□□□□ 0.24
SMG6-215ENST00000574501 PLPPR3Q6T4P5 718 aa16.58■□□□□ 0.24
SMG6-215ENST00000574501 KSR2Q6VAB6 950 aa16.58■□□□□ 0.24
SMG6-215ENST00000574501 PNKPQ96T60 521 aa16.58■□□□□ 0.24
SMG6-215ENST00000574501 EIF3CQ99613 913 aaKnown RBP16.58■□□□□ 0.24
SMG6-215ENST00000574501 GPHNQ9NQX3 736 aaPredicted RBP16.58■□□□□ 0.24
SMG6-215ENST00000574501 DBF4Q9UBU7 674 aaPredicted RBP16.58■□□□□ 0.24
SMG6-215ENST00000574501 JRKLQ9Y4A0 524 aa16.58■□□□□ 0.24
SMG6-215ENST00000574501 LOC102724159A0A0B4J2E5 919 aa16.57■□□□□ 0.24
SMG6-215ENST00000574501 PRAMEF22A3QJZ6 481 aa16.57■□□□□ 0.24
SMG6-215ENST00000574501 WDHD1O75717 1129 aaPredicted RBP16.57■□□□□ 0.24
SMG6-215ENST00000574501 MAGEA9P43362 315 aa16.57■□□□□ 0.24
SMG6-215ENST00000574501 EXOSC10Q01780 885 aaKnown RBP16.57■□□□□ 0.24
SMG6-215ENST00000574501 PWP2Q15269 919 aaKnown RBP16.57■□□□□ 0.24
SMG6-215ENST00000574501 JAKMIP3Q5VZ66 844 aa16.57■□□□□ 0.24
SMG6-215ENST00000574501 DRC1Q96MC2 740 aa16.57■□□□□ 0.24
SMG6-215ENST00000574501 YY1AP1Q9H869 796 aa16.57■□□□□ 0.24
SMG6-215ENST00000574501 BTBD11A6QL63 1104 aa16.57■□□□□ 0.24
SMG6-215ENST00000574501 HMGB1P09429 215 aaKnown RBP16.57■□□□□ 0.24
SMG6-215ENST00000574501 MTF1Q14872 753 aa16.57■□□□□ 0.24
SMG6-215ENST00000574501 AXDND1Q5T1B0 1012 aaPredicted RBP16.57■□□□□ 0.24
SMG6-215ENST00000574501 MYSM1Q5VVJ2 828 aa16.57■□□□□ 0.24
SMG6-215ENST00000574501 HDXQ7Z353 690 aa16.57■□□□□ 0.24
SMG6-215ENST00000574501 RAB11FIP4Q86YS3 637 aa16.57■□□□□ 0.24
SMG6-215ENST00000574501 LZTFL1Q9NQ48 299 aa16.57■□□□□ 0.24
SMG6-215ENST00000574501 POLR3EQ9NVU0 708 aa16.57■□□□□ 0.24
SMG6-215ENST00000574501 YEATS4O95619 227 aa16.56■□□□□ 0.24
SMG6-215ENST00000574501 SYNE3Q6ZMZ3 975 aa16.56■□□□□ 0.24
SMG6-215ENST00000574501 C8orf76Q96K31 380 aa16.56■□□□□ 0.24
SMG6-215ENST00000574501 MRPL44Q9H9J2 332 aaKnown RBP16.56■□□□□ 0.24
SMG6-215ENST00000574501 ABCB6Q9NP58 842 aa16.56■□□□□ 0.24
SMG6-215ENST00000574501 A0A0U1RQJ8 604 aa16.56■□□□□ 0.24
SMG6-215ENST00000574501 GOLGA6L9A6NEM1 432 aa16.56■□□□□ 0.24
SMG6-215ENST00000574501 KIF28PB7ZC32 967 aa16.56■□□□□ 0.24
SMG6-215ENST00000574501 TFRCP02786 760 aaKnown RBP16.56■□□□□ 0.24
SMG6-215ENST00000574501 SYKP43405 635 aa16.56■□□□□ 0.24
SMG6-215ENST00000574501 CEBPAP49715 358 aaPredicted RBP16.56■□□□□ 0.24
SMG6-215ENST00000574501 NLRP6P59044 892 aa16.56■□□□□ 0.24
SMG6-215ENST00000574501 SKIDA1Q1XH10 827 aa16.56■□□□□ 0.24
SMG6-215ENST00000574501 TC2NQ8N9U0 490 aa16.56■□□□□ 0.24
SMG6-215ENST00000574501 ATRIPQ8WXE1 791 aa16.56■□□□□ 0.24
SMG6-215ENST00000574501 SIRT1Q96EB6 747 aa16.56■□□□□ 0.24
SMG6-215ENST00000574501 E7EWF7 191 aa16.55■□□□□ 0.24
SMG6-215ENST00000574501 CUTAO60888 179 aa16.55■□□□□ 0.24
SMG6-215ENST00000574501 HOXB7P09629 217 aa16.55■□□□□ 0.24
SMG6-215ENST00000574501 ATP5JP18859 108 aa16.55■□□□□ 0.24
SMG6-215ENST00000574501 CMA1P23946 247 aa16.55■□□□□ 0.24
SMG6-215ENST00000574501 SRGAP1Q7Z6B7 1085 aa16.55■□□□□ 0.24
SMG6-215ENST00000574501 NGDNQ8NEJ9 315 aaKnown RBP16.55■□□□□ 0.24
SMG6-215ENST00000574501 CCDC102AQ96A19 550 aa16.55■□□□□ 0.24
SMG6-215ENST00000574501 GEMIN8Q9NWZ8 242 aaKnown RBP16.55■□□□□ 0.24
SMG6-215ENST00000574501 HDAC5Q9UQL6 1122 aa16.55■□□□□ 0.24
SMG6-215ENST00000574501 AKAP2Q9Y2D5 859 aa16.55■□□□□ 0.24
SMG6-215ENST00000574501 STX10O60499 249 aa16.55■□□□□ 0.24
SMG6-215ENST00000574501 RHOXF2BP0C7M4 288 aa16.55■□□□□ 0.24
SMG6-215ENST00000574501 SLC26A8Q96RN1 970 aa16.55■□□□□ 0.24
SMG6-215ENST00000574501 RHOXF2Q9BQY4 288 aa16.55■□□□□ 0.24
SMG6-215ENST00000574501 TUBE1Q9UJT0 475 aa16.55■□□□□ 0.24
SMG6-215ENST00000574501 CDC27P30260 824 aa16.54■□□□□ 0.24
SMG6-215ENST00000574501 PDE4BQ07343 736 aa16.54■□□□□ 0.24
SMG6-215ENST00000574501 TFCP2Q12800 502 aa16.54■□□□□ 0.24
SMG6-215ENST00000574501 SART3Q15020 963 aaKnown RBP16.54■□□□□ 0.24
SMG6-215ENST00000574501 EPHA10Q5JZY3 1008 aa16.54■□□□□ 0.24
SMG6-215ENST00000574501 ANO1Q5XXA6 986 aa16.54■□□□□ 0.24
SMG6-215ENST00000574501 OLFM4Q6UX06 510 aa16.54■□□□□ 0.24
SMG6-215ENST00000574501 AGXT2Q9BYV1 514 aa16.54■□□□□ 0.24
SMG6-215ENST00000574501 LAMA4Q16363 1823 aa16.54■□□□□ 0.24
SMG6-215ENST00000574501 TBX2Q13207 712 aaPredicted RBP16.54■□□□□ 0.24
SMG6-215ENST00000574501 LRRC31Q6UY01 552 aa16.54■□□□□ 0.24
SMG6-215ENST00000574501 DBNDD2Q9BQY9 259 aa16.54■□□□□ 0.24
SMG6-215ENST00000574501 L1RE1Q9UN81 338 aa16.54■□□□□ 0.24
SMG6-215ENST00000574501 CEMIPQ8WUJ3 1361 aa16.53■□□□□ 0.24
SMG6-215ENST00000574501 NCAPD2Q15021 1401 aa16.53■□□□□ 0.24
SMG6-215ENST00000574501 GUCY2CP25092 1073 aa16.53■□□□□ 0.24
SMG6-215ENST00000574501 TNNI3KQ59H18 835 aa16.53■□□□□ 0.24
SMG6-215ENST00000574501 MPRIPQ6WCQ1 1025 aa16.53■□□□□ 0.24
SMG6-215ENST00000574501 LINS1Q8NG48 757 aa16.53■□□□□ 0.24
SMG6-215ENST00000574501 HNRNPLLQ8WVV9 542 aaKnown RBP16.53■□□□□ 0.24
SMG6-215ENST00000574501 ZNF274Q96GC6 653 aaPredicted RBP16.53■□□□□ 0.24
SMG6-215ENST00000574501 FPGT-TNNI3KV9GXZ4 949 aa16.53■□□□□ 0.24
SMG6-215ENST00000574501 TECPR2O15040 1411 aa16.53■□□□□ 0.24
SMG6-215ENST00000574501 SOWAHDA6NJG2 315 aa16.53■□□□□ 0.24
SMG6-215ENST00000574501 EIF3JO75822 258 aaKnown RBP16.53■□□□□ 0.24
SMG6-215ENST00000574501 FOXP4Q8IVH2 680 aaPredicted RBP16.52■□□□□ 0.24
SMG6-215ENST00000574501 CNNM3Q8NE01 707 aa16.52■□□□□ 0.24
SMG6-215ENST00000574501 NWD1Q149M9 1564 aa16.52■□□□□ 0.23
SMG6-215ENST00000574501 RPS6KA5O75582 802 aa16.51■□□□□ 0.23
SMG6-215ENST00000574501 VSNL1P62760 191 aa16.51■□□□□ 0.23
SMG6-215ENST00000574501 SPECC1LQ69YQ0 1117 aa16.51■□□□□ 0.23
SMG6-215ENST00000574501 TTLL5Q6EMB2 1281 aa16.51■□□□□ 0.23
SMG6-215ENST00000574501 CLIC6Q96NY7 704 aa16.51■□□□□ 0.23
SMG6-215ENST00000574501 ERLIN1O75477 346 aa16.51■□□□□ 0.23
SMG6-215ENST00000574501 BMP6P22004 513 aa16.51■□□□□ 0.23
SMG6-215ENST00000574501 USP5P45974 858 aa16.51■□□□□ 0.23
SMG6-215ENST00000574501 CORO7P57737 925 aa16.51■□□□□ 0.23
SMG6-215ENST00000574501 CASP8Q14790 479 aa16.51■□□□□ 0.23
SMG6-215ENST00000574501 E2F4Q16254 413 aa16.51■□□□□ 0.23
SMG6-215ENST00000574501 SHC4Q6S5L8 630 aa16.51■□□□□ 0.23
SMG6-215ENST00000574501 C19orf44Q9H6X5 657 aa16.51■□□□□ 0.23
SMG6-215ENST00000574501 RAB21Q9UL25 225 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms