RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 TTF1Q15361 905 aaPredicted RBP18.79■□□□□ 0.6
USP43-204ENST00000573955 FAM196AQ6ZSG2 479 aa18.79■□□□□ 0.6
USP43-204ENST00000573955 CICQ96RK0 1608 aaPredicted RBP18.79■□□□□ 0.6
USP43-204ENST00000573955 ZPR1O75312 459 aa18.79■□□□□ 0.6
USP43-204ENST00000573955 PDE6AP16499 860 aa18.79■□□□□ 0.6
USP43-204ENST00000573955 CDC37L1Q7L3B6 337 aa18.79■□□□□ 0.6
USP43-204ENST00000573955 SLC51AQ86UW1 340 aa18.79■□□□□ 0.6
USP43-204ENST00000573955 GPHNQ9NQX3 736 aaPredicted RBP18.79■□□□□ 0.6
USP43-204ENST00000573955 TMEM63CQ9P1W3 806 aa18.79■□□□□ 0.6
USP43-204ENST00000573955 GTF3C6Q969F1 213 aa18.78■□□□□ 0.6
USP43-204ENST00000573955 ZNF512BQ96KM6 892 aaPredicted RBP18.78■□□□□ 0.6
USP43-204ENST00000573955 LAMA4Q16363 1823 aa18.78■□□□□ 0.6
USP43-204ENST00000573955 RPS6KA4O75676 772 aa18.78■□□□□ 0.6
USP43-204ENST00000573955 FOSBP53539 338 aa18.78■□□□□ 0.6
USP43-204ENST00000573955 CCT2P78371 535 aaKnown RBP18.78■□□□□ 0.6
USP43-204ENST00000573955 DNM1Q05193 864 aaKnown RBP18.78■□□□□ 0.6
USP43-204ENST00000573955 IMMTQ16891 758 aaKnown RBP18.78■□□□□ 0.6
USP43-204ENST00000573955 TICAM2Q86XR7 235 aa18.78■□□□□ 0.6
USP43-204ENST00000573955 ANKRD18AQ8IVF6 992 aa18.78■□□□□ 0.6
USP43-204ENST00000573955 CDC5LQ99459 802 aaKnown RBP18.78■□□□□ 0.6
USP43-204ENST00000573955 BCORQ6W2J9 1755 aa18.78■□□□□ 0.6
USP43-204ENST00000573955 HMGB1P09429 215 aaKnown RBP18.77■□□□□ 0.6
USP43-204ENST00000573955 ZSCAN25Q6NSZ9 544 aa18.77■□□□□ 0.6
USP43-204ENST00000573955 FAM173BQ6P4H8 233 aa18.77■□□□□ 0.6
USP43-204ENST00000573955 ZNF771Q7L3S4 317 aaPredicted RBP18.77■□□□□ 0.6
USP43-204ENST00000573955 NBPF5PQ86XG9 351 aaPredicted RBP18.77■□□□□ 0.6
USP43-204ENST00000573955 MAGEB6Q8N7X4 407 aa18.77■□□□□ 0.6
USP43-204ENST00000573955 ARHGEF1Q92888 912 aaKnown RBP18.77■□□□□ 0.6
USP43-204ENST00000573955 SETDB2Q96T68 719 aa18.77■□□□□ 0.6
USP43-204ENST00000573955 RTCBQ9Y3I0 505 aaKnown RBP18.77■□□□□ 0.6
USP43-204ENST00000573955 MYH7P12883 1935 aa18.77■□□□□ 0.6
USP43-204ENST00000573955 SCRN1Q12765 414 aa18.77■□□□□ 0.6
USP43-204ENST00000573955 CELF1Q92879 486 aaKnown RBP18.77■□□□□ 0.6
USP43-204ENST00000573955 NARFQ9UHQ1 456 aa18.77■□□□□ 0.6
USP43-204ENST00000573955 CTNNA3Q9UI47 895 aa18.77■□□□□ 0.6
USP43-204ENST00000573955 SBF2Q86WG5 1849 aa18.77■□□□□ 0.59
USP43-204ENST00000573955 NPHP1O15259 732 aa18.76■□□□□ 0.59
USP43-204ENST00000573955 NCOA5Q9HCD5 579 aaKnown RBP18.76■□□□□ 0.59
USP43-204ENST00000573955 GYG1P46976 350 aa18.76■□□□□ 0.59
USP43-204ENST00000573955 EXOSC10Q01780 885 aaKnown RBP18.76■□□□□ 0.59
USP43-204ENST00000573955 DENND2AQ9ULE3 1009 aa18.76■□□□□ 0.59
USP43-204ENST00000573955 ZNF213O14771 459 aa18.75■□□□□ 0.59
USP43-204ENST00000573955 RAB11FIP4Q86YS3 637 aa18.75■□□□□ 0.59
USP43-204ENST00000573955 CERS3Q8IU89 383 aa18.75■□□□□ 0.59
USP43-204ENST00000573955 AIDAQ96BJ3 306 aa18.75■□□□□ 0.59
USP43-204ENST00000573955 SYCE3A1L190 88 aa18.74■□□□□ 0.59
USP43-204ENST00000573955 RTL9Q8NET4 1388 aa18.74■□□□□ 0.59
USP43-204ENST00000573955 UBE3CQ15386 1083 aa18.74■□□□□ 0.59
USP43-204ENST00000573955 RC3H1Q5TC82 1133 aaKnown RBP18.74■□□□□ 0.59
USP43-204ENST00000573955 NHSQ6T4R5 1651 aa18.74■□□□□ 0.59
USP43-204ENST00000573955 TCRBV5S4A2TA0A5A2 114 aa18.73■□□□□ 0.59
USP43-204ENST00000573955 MBD3O95983 291 aa18.73■□□□□ 0.59
USP43-204ENST00000573955 ATP6V1DQ9Y5K8 247 aa18.73■□□□□ 0.59
USP43-204ENST00000573955 MAP3K12Q12852 859 aa18.73■□□□□ 0.59
USP43-204ENST00000573955 SF3B3Q15393 1217 aaKnown RBP18.73■□□□□ 0.59
USP43-204ENST00000573955 ARMT1Q9H993 441 aa18.73■□□□□ 0.59
USP43-204ENST00000573955 LAMB2P55268 1798 aa18.73■□□□□ 0.59
USP43-204ENST00000573955 MBD4O95243 580 aa18.72■□□□□ 0.59
USP43-204ENST00000573955 MYRIPQ8NFW9 859 aa18.72■□□□□ 0.59
USP43-204ENST00000573955 ABCF2Q9UG63 623 aa18.72■□□□□ 0.59
USP43-204ENST00000573955 PRC1O43663 620 aa18.72■□□□□ 0.59
USP43-204ENST00000573955 RFC4P35249 363 aa18.72■□□□□ 0.59
USP43-204ENST00000573955 RALYLQ86SE5 291 aaKnown RBP18.72■□□□□ 0.59
USP43-204ENST00000573955 MIGA1Q8NAN2 632 aa18.72■□□□□ 0.59
USP43-204ENST00000573955 NKX2-3Q8TAU0 364 aa18.72■□□□□ 0.59
USP43-204ENST00000573955 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.72■□□□□ 0.59
USP43-204ENST00000573955 LRP2BPQ9P2M1 347 aa18.72■□□□□ 0.59
USP43-204ENST00000573955 MINPP1Q9UNW1 487 aa18.72■□□□□ 0.59
USP43-204ENST00000573955 ZNF831Q5JPB2 1677 aa18.72■□□□□ 0.59
USP43-204ENST00000573955 ARAP2Q8WZ64 1704 aa18.72■□□□□ 0.59
USP43-204ENST00000573955 IGSF3O75054 1194 aa18.71■□□□□ 0.59
USP43-204ENST00000573955 PDCP20941 246 aa18.71■□□□□ 0.59
USP43-204ENST00000573955 MCM5P33992 734 aa18.71■□□□□ 0.59
USP43-204ENST00000573955 TBC1D10CQ8IV04 446 aa18.71■□□□□ 0.59
USP43-204ENST00000573955 FAM184AQ8NB25 1140 aa18.71■□□□□ 0.59
USP43-204ENST00000573955 NLRP3Q96P20 1036 aa18.71■□□□□ 0.59
USP43-204ENST00000573955 NBPF3Q9H094 633 aa18.71■□□□□ 0.59
USP43-204ENST00000573955 INCENPQ9NQS7 918 aa18.71■□□□□ 0.59
USP43-204ENST00000573955 ZKSCAN5Q9Y2L8 839 aa18.71■□□□□ 0.59
USP43-204ENST00000573955 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.71■□□□□ 0.59
USP43-204ENST00000573955 PFKFB2O60825 505 aa18.71■□□□□ 0.59
USP43-204ENST00000573955 STK11IPQ8N1F8 1099 aa18.71■□□□□ 0.59
USP43-204ENST00000573955 PROM2Q8N271 834 aa18.71■□□□□ 0.59
USP43-204ENST00000573955 BSDC1Q9NW68 430 aaPredicted RBP18.71■□□□□ 0.59
USP43-204ENST00000573955 UTRNP46939 3433 aa18.71■□□□□ 0.59
USP43-204ENST00000573955 SCN7AQ01118 1682 aa18.71■□□□□ 0.59
USP43-204ENST00000573955 KLRK1P26718 216 aa18.7■□□□□ 0.58
USP43-204ENST00000573955 ZNF445P59923 1031 aa18.7■□□□□ 0.58
USP43-204ENST00000573955 VPS37DQ86XT2 251 aa18.7■□□□□ 0.58
USP43-204ENST00000573955 ZNF710Q8N1W2 664 aa18.7■□□□□ 0.58
USP43-204ENST00000573955 CNKSR2Q8WXI2 1034 aa18.7■□□□□ 0.58
USP43-204ENST00000573955 STRBPQ96SI9 672 aaKnown RBP18.7■□□□□ 0.58
USP43-204ENST00000573955 NYXQ9GZU5 481 aa18.7■□□□□ 0.58
USP43-204ENST00000573955 PRKAB2O43741 272 aa18.7■□□□□ 0.58
USP43-204ENST00000573955 CTDNEP1O95476 244 aa18.7■□□□□ 0.58
USP43-204ENST00000573955 PDIA3P30101 505 aaKnown RBP18.7■□□□□ 0.58
USP43-204ENST00000573955 NCOA7Q8NI08 942 aa18.7■□□□□ 0.58
USP43-204ENST00000573955 SRCAPQ6ZRS2 3230 aa18.7■□□□□ 0.58
USP43-204ENST00000573955 PTPDC1A2A3K4 754 aa18.7■□□□□ 0.58
USP43-204ENST00000573955 TRAPPC3LQ5T215 181 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms