RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 CFAP100Q494V2 611 aa16.64■□□□□ 0.25
RPAIN-213ENST00000573577 SAPCD2Q86UD0 394 aa16.64■□□□□ 0.25
RPAIN-213ENST00000573577 KIF1BPQ96EK5 621 aa16.64■□□□□ 0.25
RPAIN-213ENST00000573577 CDCA5Q96FF9 252 aa16.64■□□□□ 0.25
RPAIN-213ENST00000573577 NEUROD6Q96NK8 337 aa16.64■□□□□ 0.25
RPAIN-213ENST00000573577 SERPINA10Q9UK55 444 aa16.64■□□□□ 0.25
RPAIN-213ENST00000573577 PCDHB15Q9Y5E8 787 aa16.64■□□□□ 0.25
RPAIN-213ENST00000573577 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.64■□□□□ 0.25
RPAIN-213ENST00000573577 COL1A1P02452 1464 aaPredicted RBP16.64■□□□□ 0.25
RPAIN-213ENST00000573577 SEMA3EO15041 775 aa16.63■□□□□ 0.25
RPAIN-213ENST00000573577 VEGFBP49765 207 aa16.63■□□□□ 0.25
RPAIN-213ENST00000573577 RBM5P52756 815 aaKnown RBP eCLIP16.63■□□□□ 0.25
RPAIN-213ENST00000573577 GRIK5Q16478 980 aa16.63■□□□□ 0.25
RPAIN-213ENST00000573577 TNNI3KQ59H18 835 aa16.63■□□□□ 0.25
RPAIN-213ENST00000573577 GORABQ5T7V8 394 aa16.63■□□□□ 0.25
RPAIN-213ENST00000573577 CCDC102BQ68D86 513 aa16.63■□□□□ 0.25
RPAIN-213ENST00000573577 APOBEC3FQ8IUX4 373 aaKnown RBP16.63■□□□□ 0.25
RPAIN-213ENST00000573577 WDR66Q8TBY9 1149 aa16.63■□□□□ 0.25
RPAIN-213ENST00000573577 RHPN1Q8TCX5 695 aa16.63■□□□□ 0.25
RPAIN-213ENST00000573577 SCAF8Q9UPN6 1271 aaKnown RBP16.63■□□□□ 0.25
RPAIN-213ENST00000573577 PCDHAC2Q9Y5I4 1007 aa16.63■□□□□ 0.25
RPAIN-213ENST00000573577 FPGT-TNNI3KV9GXZ4 949 aa16.63■□□□□ 0.25
RPAIN-213ENST00000573577 MYO1BO43795 1136 aa16.62■□□□□ 0.25
RPAIN-213ENST00000573577 XAGE2Q96GT9 111 aa16.62■□□□□ 0.25
RPAIN-213ENST00000573577 GBA2Q9HCG7 927 aaPredicted RBP16.62■□□□□ 0.25
RPAIN-213ENST00000573577 SUGT1Q9Y2Z0 365 aa16.62■□□□□ 0.25
RPAIN-213ENST00000573577 POLR2AP24928 1970 aaKnown RBP16.62■□□□□ 0.25
RPAIN-213ENST00000573577 CRKP46108 304 aa16.61■□□□□ 0.25
RPAIN-213ENST00000573577 IRX6P78412 446 aaPredicted RBP16.61■□□□□ 0.25
RPAIN-213ENST00000573577 HDLBPQ00341 1268 aaKnown RBP16.61■□□□□ 0.25
RPAIN-213ENST00000573577 CLASRPQ8N2M8 674 aaKnown RBP16.61■□□□□ 0.25
RPAIN-213ENST00000573577 HHIPL1Q96JK4 782 aa16.61■□□□□ 0.25
RPAIN-213ENST00000573577 PRMT6Q96LA8 375 aaPredicted RBP16.61■□□□□ 0.25
RPAIN-213ENST00000573577 DCTPP1Q9H773 170 aa16.61■□□□□ 0.25
RPAIN-213ENST00000573577 DENND2AQ9ULE3 1009 aa16.61■□□□□ 0.25
RPAIN-213ENST00000573577 MAST3O60307 1309 aa16.61■□□□□ 0.25
RPAIN-213ENST00000573577 CLRN2A0PK11 232 aa16.6■□□□□ 0.25
RPAIN-213ENST00000573577 APBB1O00213 710 aa16.6■□□□□ 0.25
RPAIN-213ENST00000573577 HDAC1Q13547 482 aaPredicted RBP16.6■□□□□ 0.25
RPAIN-213ENST00000573577 RASGRF1Q13972 1273 aa16.6■□□□□ 0.25
RPAIN-213ENST00000573577 CCDC158Q5M9N0 1113 aa16.6■□□□□ 0.25
RPAIN-213ENST00000573577 PAXIP1Q6ZW49 1069 aaPredicted RBP16.6■□□□□ 0.25
RPAIN-213ENST00000573577 C2orf69Q8N8R5 385 aa16.6■□□□□ 0.25
RPAIN-213ENST00000573577 LRRCC1Q9C099 1032 aa16.6■□□□□ 0.25
RPAIN-213ENST00000573577 RWDD1Q9H446 243 aaPredicted RBP16.6■□□□□ 0.25
RPAIN-213ENST00000573577 PCNTO95613 3336 aa16.6■□□□□ 0.25
RPAIN-213ENST00000573577 AOX1Q06278 1338 aa16.6■□□□□ 0.25
RPAIN-213ENST00000573577 MYH13Q9UKX3 1938 aa16.6■□□□□ 0.25
RPAIN-213ENST00000573577 ECE1P42892 770 aa16.59■□□□□ 0.25
RPAIN-213ENST00000573577 HUNKP57058 714 aa16.59■□□□□ 0.25
RPAIN-213ENST00000573577 PRAMEF18Q5VWM3 479 aa16.59■□□□□ 0.25
RPAIN-213ENST00000573577 CYP4F22Q6NT55 531 aa16.59■□□□□ 0.25
RPAIN-213ENST00000573577 AACSQ86V21 672 aa16.59■□□□□ 0.25
RPAIN-213ENST00000573577 TEKT1Q969V4 418 aa16.59■□□□□ 0.25
RPAIN-213ENST00000573577 CAPNS2Q96L46 248 aa16.59■□□□□ 0.25
RPAIN-213ENST00000573577 PDS5AQ29RF7 1337 aaKnown RBP16.59■□□□□ 0.25
RPAIN-213ENST00000573577 WDR33Q9C0J8 1336 aaKnown RBP16.59■□□□□ 0.25
RPAIN-213ENST00000573577 SALL1Q9NSC2 1324 aa16.59■□□□□ 0.25
RPAIN-213ENST00000573577 IFIT2P09913 472 aaKnown RBP16.58■□□□□ 0.24
RPAIN-213ENST00000573577 UQCRFS1P1P0C7P4 283 aa16.58■□□□□ 0.24
RPAIN-213ENST00000573577 FKBP1BP68106 108 aa16.58■□□□□ 0.24
RPAIN-213ENST00000573577 SPDYE2Q495Y8 402 aa16.58■□□□□ 0.24
RPAIN-213ENST00000573577 EAF2Q96CJ1 260 aaPredicted RBP16.58■□□□□ 0.24
RPAIN-213ENST00000573577 GCC1Q96CN9 775 aa16.58■□□□□ 0.24
RPAIN-213ENST00000573577 MRIQ9BWK5 157 aa16.58■□□□□ 0.24
RPAIN-213ENST00000573577 DEFB129Q9H1M3 183 aa16.58■□□□□ 0.24
RPAIN-213ENST00000573577 VEZTQ9HBM0 779 aa16.58■□□□□ 0.24
RPAIN-213ENST00000573577 IL1RAPL2Q9NP60 686 aa16.58■□□□□ 0.24
RPAIN-213ENST00000573577 ZBTB47Q9UFB7 747 aaPredicted RBP16.58■□□□□ 0.24
RPAIN-213ENST00000573577 ECM29Q5VYK3 1845 aa16.58■□□□□ 0.24
RPAIN-213ENST00000573577 PRDX5P30044 214 aa16.57■□□□□ 0.24
RPAIN-213ENST00000573577 GRM1Q13255 1194 aa16.57■□□□□ 0.24
RPAIN-213ENST00000573577 TTC39AQ5SRH9 613 aa16.57■□□□□ 0.24
RPAIN-213ENST00000573577 ZDHHC15Q96MV8 337 aa16.57■□□□□ 0.24
RPAIN-213ENST00000573577 TDRD3Q9H7E2 651 aaKnown RBP16.57■□□□□ 0.24
RPAIN-213ENST00000573577 ZNF70Q9UC06 446 aaPredicted RBP16.57■□□□□ 0.24
RPAIN-213ENST00000573577 PPP2R3BQ9Y5P8 575 aa16.57■□□□□ 0.24
RPAIN-213ENST00000573577 PAPPA2Q9BXP8 1791 aa16.56■□□□□ 0.24
RPAIN-213ENST00000573577 THSD7BQ9C0I4 1608 aa16.56■□□□□ 0.24
RPAIN-213ENST00000573577 LDHBP07195 334 aaKnown RBP16.56■□□□□ 0.24
RPAIN-213ENST00000573577 NEFLP07196 543 aa16.56■□□□□ 0.24
RPAIN-213ENST00000573577 ARID4AP29374 1257 aaPredicted RBP16.56■□□□□ 0.24
RPAIN-213ENST00000573577 NF2P35240 595 aa16.56■□□□□ 0.24
RPAIN-213ENST00000573577 TNFAIP1Q13829 316 aa16.56■□□□□ 0.24
RPAIN-213ENST00000573577 HHIPL2Q6UWX4 724 aa16.56■□□□□ 0.24
RPAIN-213ENST00000573577 ZGPATQ8N5A5 531 aaKnown RBP16.56■□□□□ 0.24
RPAIN-213ENST00000573577 DBNDD2Q9BQY9 259 aa16.56■□□□□ 0.24
RPAIN-213ENST00000573577 CCDC8Q9H0W5 538 aaPredicted RBP16.56■□□□□ 0.24
RPAIN-213ENST00000573577 SPATA5Q8NB90 893 aa16.55■□□□□ 0.24
RPAIN-213ENST00000573577 ZNF512BQ96KM6 892 aaPredicted RBP16.55■□□□□ 0.24
RPAIN-213ENST00000573577 HMG20BQ9P0W2 317 aa16.55■□□□□ 0.24
RPAIN-213ENST00000573577 DBNLQ9UJU6 430 aaKnown RBP16.55■□□□□ 0.24
RPAIN-213ENST00000573577 HSPA1AP0DMV8 641 aaKnown RBP16.54■□□□□ 0.24
RPAIN-213ENST00000573577 HSPA1BP0DMV9 641 aaKnown RBP16.54■□□□□ 0.24
RPAIN-213ENST00000573577 RASA3Q14644 834 aa16.54■□□□□ 0.24
RPAIN-213ENST00000573577 DIXDC1Q155Q3 683 aa16.54■□□□□ 0.24
RPAIN-213ENST00000573577 APOBEC3HQ6NTF7 200 aaKnown RBP16.54■□□□□ 0.24
RPAIN-213ENST00000573577 RGMBQ6NW40 437 aa16.54■□□□□ 0.24
RPAIN-213ENST00000573577 PI16Q6UXB8 463 aa16.54■□□□□ 0.24
RPAIN-213ENST00000573577 BCL11AQ9H165 835 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms