RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 SPATA24Q86W54 205 aa13.99□□□□□ -0.17
PCDHGA9-201ENST00000573521 OTUD6BQ8N6M0 293 aa13.99□□□□□ -0.17
PCDHGA9-201ENST00000573521 LEO1Q8WVC0 666 aaPredicted RBP13.99□□□□□ -0.17
PCDHGA9-201ENST00000573521 ZBTB3Q9H5J0 574 aa13.99□□□□□ -0.17
PCDHGA9-201ENST00000573521 SPDYE4A6NLX3 237 aa13.98□□□□□ -0.17
PCDHGA9-201ENST00000573521 CDC25BP30305 580 aa13.98□□□□□ -0.17
PCDHGA9-201ENST00000573521 SAMD1Q6SPF0 538 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA9-201ENST00000573521 C16orf71Q8IYS4 520 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA9-201ENST00000573521 ANKIB1Q9P2G1 1089 aa13.98□□□□□ -0.17
PCDHGA9-201ENST00000573521 SSR1P43307 286 aaKnown RBP13.98□□□□□ -0.17
PCDHGA9-201ENST00000573521 MCM6Q14566 821 aa13.98□□□□□ -0.17
PCDHGA9-201ENST00000573521 USHBP1Q8N6Y0 703 aa13.98□□□□□ -0.17
PCDHGA9-201ENST00000573521 KBTBD3Q8NAB2 608 aa13.98□□□□□ -0.17
PCDHGA9-201ENST00000573521 PLBD2Q8NHP8 589 aa13.98□□□□□ -0.17
PCDHGA9-201ENST00000573521 RPGRQ92834 1020 aaKnown RBP13.98□□□□□ -0.17
PCDHGA9-201ENST00000573521 ZNF274Q96GC6 653 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA9-201ENST00000573521 ATP10AO60312 1499 aa13.98□□□□□ -0.17
PCDHGA9-201ENST00000573521 TTC37Q6PGP7 1564 aa13.98□□□□□ -0.17
PCDHGA9-201ENST00000573521 CYP7A1P22680 504 aa13.98□□□□□ -0.17
PCDHGA9-201ENST00000573521 EVCP57679 992 aa13.98□□□□□ -0.17
PCDHGA9-201ENST00000573521 HAND2P61296 217 aa13.98□□□□□ -0.17
PCDHGA9-201ENST00000573521 ASIC1P78348 528 aa13.98□□□□□ -0.17
PCDHGA9-201ENST00000573521 LRRC45Q96CN5 670 aa13.98□□□□□ -0.17
PCDHGA9-201ENST00000573521 METTL22Q9BUU2 404 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA9-201ENST00000573521 A0A1B0GUL7 405 aa13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 EYA2O00167 538 aa13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 GIGYF1O75420 1035 aaPredicted RBP13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 PPP2R3AQ06190 1150 aa13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 TTC31Q49AM3 519 aaPredicted RBP13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 TCERG1LQ5VWI1 586 aa13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 SYT10Q6XYQ8 523 aa13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 STAP2Q9UGK3 403 aa13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 MTUS1Q9ULD2 1270 aa13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 IKBKGQ9Y6K9 419 aa13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 RUFY4Q6ZNE9 571 aa13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 GPR161Q8N6U8 529 aaKnown RBP13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 ANGEL1Q9UNK9 670 aaKnown RBP13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 ZNF521Q96K83 1311 aa13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 FOXO3O43524 673 aa13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 CTNNA2P26232 953 aa13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 ARHGAP25P42331 645 aa13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 MCTP2Q6DN12 878 aa13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 HS2ST1Q7LGA3 356 aa13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 SSH3Q8TE77 659 aa13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 PLCD4Q9BRC7 762 aa13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 RNMTO43148 476 aaKnown RBP13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 NEBLO76041 1014 aa13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 GTF2A1P52655 376 aaPredicted RBP13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 ARHGAP31Q2M1Z3 1444 aa13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 CNNM4Q6P4Q7 775 aa13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 STK11IPQ8N1F8 1099 aa13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 BCCIPQ9P287 314 aaKnown RBP eCLIP13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 DMRT2Q9Y5R5 561 aa13.97□□□□□ -0.17
PCDHGA9-201ENST00000573521 KDM5CP41229 1560 aa13.96□□□□□ -0.17
PCDHGA9-201ENST00000573521 RBM6P78332 1123 aaKnown RBP13.96□□□□□ -0.17
PCDHGA9-201ENST00000573521 PARP10Q53GL7 1025 aa13.96□□□□□ -0.17
PCDHGA9-201ENST00000573521 CCDC84Q86UT8 332 aaPredicted RBP13.96□□□□□ -0.17
PCDHGA9-201ENST00000573521 EYA1Q99502 592 aa13.96□□□□□ -0.17
PCDHGA9-201ENST00000573521 PLEKHG3A1L390 1219 aa13.96□□□□□ -0.17
PCDHGA9-201ENST00000573521 PSDA5PKW4 1024 aaPredicted RBP13.96□□□□□ -0.17
PCDHGA9-201ENST00000573521 TSPY3P0CV98 308 aa13.96□□□□□ -0.17
PCDHGA9-201ENST00000573521 TSPY8P0CW00 308 aa13.96□□□□□ -0.17
PCDHGA9-201ENST00000573521 MATR3P43243 847 aaKnown RBP eCLIP13.96□□□□□ -0.17
PCDHGA9-201ENST00000573521 TSHZ3Q63HK5 1081 aa13.96□□□□□ -0.17
PCDHGA9-201ENST00000573521 IFT74Q96LB3 600 aa13.96□□□□□ -0.17
PCDHGA9-201ENST00000573521 ZNF830Q96NB3 372 aaPredicted RBP13.96□□□□□ -0.17
PCDHGA9-201ENST00000573521 CSRNP2Q9H175 543 aa13.96□□□□□ -0.17
PCDHGA9-201ENST00000573521 RRAGDQ9NQL2 400 aaPredicted RBP13.96□□□□□ -0.17
PCDHGA9-201ENST00000573521 MAGEB6P1A0A0J9YX57 407 aa13.96□□□□□ -0.18
PCDHGA9-201ENST00000573521 ATP5JP18859 108 aa13.96□□□□□ -0.18
PCDHGA9-201ENST00000573521 ZNF569Q5MCW4 686 aa13.96□□□□□ -0.18
PCDHGA9-201ENST00000573521 ADALQ6DHV7 355 aa13.96□□□□□ -0.18
PCDHGA9-201ENST00000573521 TMED8Q6PL24 325 aaPredicted RBP13.96□□□□□ -0.18
PCDHGA9-201ENST00000573521 RRP36Q96EU6 259 aaKnown RBP13.96□□□□□ -0.18
PCDHGA9-201ENST00000573521 UBA5Q9GZZ9 404 aa13.96□□□□□ -0.18
PCDHGA9-201ENST00000573521 CBX8Q9HC52 389 aa13.96□□□□□ -0.18
PCDHGA9-201ENST00000573521 FANCCQ00597 558 aa13.95□□□□□ -0.18
PCDHGA9-201ENST00000573521 UBXN1Q04323 297 aa13.95□□□□□ -0.18
PCDHGA9-201ENST00000573521 PPFIA1Q13136 1202 aa13.95□□□□□ -0.18
PCDHGA9-201ENST00000573521 SYCP3Q8IZU3 236 aa13.95□□□□□ -0.18
PCDHGA9-201ENST00000573521 PHACTR3Q96KR7 559 aa13.95□□□□□ -0.18
PCDHGA9-201ENST00000573521 CDCA7Q9BWT1 371 aaPredicted RBP13.95□□□□□ -0.18
PCDHGA9-201ENST00000573521 KCNH3Q9ULD8 1083 aa13.95□□□□□ -0.18
PCDHGA9-201ENST00000573521 DHX37Q8IY37 1157 aaKnown RBP13.95□□□□□ -0.18
PCDHGA9-201ENST00000573521 ATP5J2-PTCD1G3V325 749 aa13.95□□□□□ -0.18
PCDHGA9-201ENST00000573521 WHAMMP3Q1A5X7 153 aa13.95□□□□□ -0.18
PCDHGA9-201ENST00000573521 MSANTD4Q8NCY6 345 aa13.95□□□□□ -0.18
PCDHGA9-201ENST00000573521 SPINK5Q9NQ38 1064 aaPredicted RBP13.95□□□□□ -0.18
PCDHGA9-201ENST00000573521 HOXC9P31274 260 aa13.95□□□□□ -0.18
PCDHGA9-201ENST00000573521 CHMP4BP1P59074 171 aa13.95□□□□□ -0.18
PCDHGA9-201ENST00000573521 MTMR3Q13615 1198 aa13.95□□□□□ -0.18
PCDHGA9-201ENST00000573521 TNNI3KQ59H18 835 aa13.95□□□□□ -0.18
PCDHGA9-201ENST00000573521 MSL1Q68DK7 614 aa13.95□□□□□ -0.18
PCDHGA9-201ENST00000573521 CCDC65Q8IXS2 484 aa13.95□□□□□ -0.18
PCDHGA9-201ENST00000573521 CCDC82Q8N4S0 544 aa13.95□□□□□ -0.18
PCDHGA9-201ENST00000573521 DHX58Q96C10 678 aa13.95□□□□□ -0.18
PCDHGA9-201ENST00000573521 SNRKQ9NRH2 765 aa13.95□□□□□ -0.18
PCDHGA9-201ENST00000573521 RSPH14Q9UHP6 348 aa13.95□□□□□ -0.18
PCDHGA9-201ENST00000573521 DENND2AQ9ULE3 1009 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms