RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 ZSCAN16Q9H4T2 348 aaPredicted RBP18.8■□□□□ 0.6
RAB40B-206ENST00000571995 AATFQ9NY61 560 aaKnown RBP eCLIP18.8■□□□□ 0.64e-8■■■■■ 70.4
RAB40B-206ENST00000571995 PPP1R1BQ9UD71 204 aaPredicted RBP18.8■□□□□ 0.6
RAB40B-206ENST00000571995 ARHGAP23Q9P227 1491 aa18.8■□□□□ 0.6
RAB40B-206ENST00000571995 RFC4P35249 363 aa18.79■□□□□ 0.6
RAB40B-206ENST00000571995 SPATA5Q8NB90 893 aa18.79■□□□□ 0.6
RAB40B-206ENST00000571995 PLIN2Q99541 437 aa18.79■□□□□ 0.6
RAB40B-206ENST00000571995 ARID5BQ14865 1188 aa18.79■□□□□ 0.6
RAB40B-206ENST00000571995 MKNK2Q9HBH9 465 aa18.79■□□□□ 0.6
RAB40B-206ENST00000571995 SENP2Q9HC62 589 aa18.79■□□□□ 0.6
RAB40B-206ENST00000571995 SSRP1Q08945 709 aaKnown RBP18.79■□□□□ 0.6
RAB40B-206ENST00000571995 TMC6Q7Z403 805 aa18.79■□□□□ 0.6
RAB40B-206ENST00000571995 CDC5LQ99459 802 aaKnown RBP18.79■□□□□ 0.6
RAB40B-206ENST00000571995 CLEC17AQ6ZS10 378 aa18.78■□□□□ 0.6
RAB40B-206ENST00000571995 MRPS27Q92552 414 aaKnown RBP18.78■□□□□ 0.6
RAB40B-206ENST00000571995 PIK3C2AO00443 1686 aa18.78■□□□□ 0.6
RAB40B-206ENST00000571995 TSPY2A6NKD2 308 aa18.78■□□□□ 0.6
RAB40B-206ENST00000571995 PDE8BO95263 885 aa18.78■□□□□ 0.6
RAB40B-206ENST00000571995 PCCAP05165 728 aaPredicted RBP18.78■□□□□ 0.6
RAB40B-206ENST00000571995 RBM5P52756 815 aaKnown RBP eCLIP18.78■□□□□ 0.6
RAB40B-206ENST00000571995 FAM47AQ5JRC9 791 aa18.78■□□□□ 0.6
RAB40B-206ENST00000571995 NAA16Q6N069 864 aaPredicted RBP18.78■□□□□ 0.6
RAB40B-206ENST00000571995 NAT10Q9H0A0 1025 aaKnown RBP18.78■□□□□ 0.6
RAB40B-206ENST00000571995 RIMBP2O15034 1052 aa18.78■□□□□ 0.6
RAB40B-206ENST00000571995 ZFYP08048 801 aaPredicted RBP18.78■□□□□ 0.6
RAB40B-206ENST00000571995 PUM3Q15397 648 aaKnown RBP18.78■□□□□ 0.6
RAB40B-206ENST00000571995 OLFM4Q6UX06 510 aa18.78■□□□□ 0.6
RAB40B-206ENST00000571995 TTF1Q15361 905 aaPredicted RBP18.77■□□□□ 0.6
RAB40B-206ENST00000571995 TMX4Q9H1E5 349 aaPredicted RBP18.77■□□□□ 0.6
RAB40B-206ENST00000571995 SAP30BPQ9UHR5 308 aaKnown RBP18.77■□□□□ 0.6
RAB40B-206ENST00000571995 SPDYE4A6NLX3 237 aa18.77■□□□□ 0.6
RAB40B-206ENST00000571995 NLRP3Q96P20 1036 aa18.77■□□□□ 0.6
RAB40B-206ENST00000571995 MRVI1Q9Y6F6 885 aa18.77■□□□□ 0.6
RAB40B-206ENST00000571995 TPM2P07951 284 aa18.77■□□□□ 0.6
RAB40B-206ENST00000571995 C11orf57Q6ZUT1 292 aaPredicted RBP18.77■□□□□ 0.6
RAB40B-206ENST00000571995 CNNM3Q8NE01 707 aa18.77■□□□□ 0.6
RAB40B-206ENST00000571995 COBLO75128 1261 aa18.76■□□□□ 0.59
RAB40B-206ENST00000571995 RABL6Q3YEC7 729 aaPredicted RBP18.76■□□□□ 0.59
RAB40B-206ENST00000571995 DSCC1Q9BVC3 393 aa18.76■□□□□ 0.59
RAB40B-206ENST00000571995 ANO10Q9NW15 660 aa18.76■□□□□ 0.59
RAB40B-206ENST00000571995 MON2Q7Z3U7 1717 aa18.76■□□□□ 0.59
RAB40B-206ENST00000571995 PFKFB2O60825 505 aa18.76■□□□□ 0.59
RAB40B-206ENST00000571995 USPL1Q5W0Q7 1092 aa18.76■□□□□ 0.59
RAB40B-206ENST00000571995 AMOTL1Q8IY63 956 aa18.76■□□□□ 0.59
RAB40B-206ENST00000571995 SYKP43405 635 aa18.75■□□□□ 0.59
RAB40B-206ENST00000571995 STX17P56962 302 aa18.75■□□□□ 0.59
RAB40B-206ENST00000571995 DYNLL1P63167 89 aaKnown RBP18.75■□□□□ 0.59
RAB40B-206ENST00000571995 IKQ13123 557 aaPredicted RBP18.75■□□□□ 0.59
RAB40B-206ENST00000571995 PCMTD1Q96MG8 357 aaPredicted RBP18.75■□□□□ 0.59
RAB40B-206ENST00000571995 ANGEL1Q9UNK9 670 aaKnown RBP18.75■□□□□ 0.59
RAB40B-206ENST00000571995 CDKL5O76039 1030 aa18.75■□□□□ 0.59
RAB40B-206ENST00000571995 UQCRFS1P1P0C7P4 283 aa18.75■□□□□ 0.59
RAB40B-206ENST00000571995 TNNT1P13805 278 aa18.75■□□□□ 0.59
RAB40B-206ENST00000571995 NDUFA8P51970 172 aa18.75■□□□□ 0.59
RAB40B-206ENST00000571995 RTN1Q16799 776 aa18.75■□□□□ 0.59
RAB40B-206ENST00000571995 GPIHBP1Q8IV16 184 aa18.75■□□□□ 0.59
RAB40B-206ENST00000571995 CLSTN2Q9H4D0 955 aa18.75■□□□□ 0.59
RAB40B-206ENST00000571995 MCM9Q9NXL9 1143 aa18.75■□□□□ 0.59
RAB40B-206ENST00000571995 PCDHA7Q9UN72 937 aa18.75■□□□□ 0.59
RAB40B-206ENST00000571995 SLIT1O75093 1534 aa18.75■□□□□ 0.59
RAB40B-206ENST00000571995 TNS3Q68CZ2 1445 aa18.75■□□□□ 0.59
RAB40B-206ENST00000571995 RASGRF1Q13972 1273 aa18.75■□□□□ 0.59
RAB40B-206ENST00000571995 ZNF827Q17R98 1081 aa18.75■□□□□ 0.59
RAB40B-206ENST00000571995 IGSF3O75054 1194 aa18.75■□□□□ 0.59
RAB40B-206ENST00000571995 EIF6P56537 245 aaKnown RBP18.75■□□□□ 0.59
RAB40B-206ENST00000571995 PICALMQ13492 652 aa18.75■□□□□ 0.59
RAB40B-206ENST00000571995 STX1AQ16623 288 aa18.75■□□□□ 0.59
RAB40B-206ENST00000571995 TRMT1LQ7Z2T5 733 aaKnown RBP18.75■□□□□ 0.59
RAB40B-206ENST00000571995 TBC1D10CQ8IV04 446 aa18.75■□□□□ 0.59
RAB40B-206ENST00000571995 MAGEB6P1A0A0J9YX57 407 aa18.74■□□□□ 0.59
RAB40B-206ENST00000571995 CHRNDQ07001 517 aa18.74■□□□□ 0.59
RAB40B-206ENST00000571995 KRT40Q6A162 431 aa18.74■□□□□ 0.59
RAB40B-206ENST00000571995 ZSCAN29Q8IWY8 852 aaPredicted RBP18.74■□□□□ 0.59
RAB40B-206ENST00000571995 LPIN2Q92539 896 aa18.74■□□□□ 0.59
RAB40B-206ENST00000571995 AK7Q96M32 723 aa18.74■□□□□ 0.59
RAB40B-206ENST00000571995 CABP5Q9NP86 173 aa18.74■□□□□ 0.59
RAB40B-206ENST00000571995 CBX1P83916 185 aa18.74■□□□□ 0.59
RAB40B-206ENST00000571995 RESTQ13127 1097 aa18.74■□□□□ 0.59
RAB40B-206ENST00000571995 ERFEQ4G0M1 354 aa18.74■□□□□ 0.59
RAB40B-206ENST00000571995 IQCA1Q86XH1 822 aa18.74■□□□□ 0.59
RAB40B-206ENST00000571995 IFNKQ9P0W0 207 aa18.74■□□□□ 0.59
RAB40B-206ENST00000571995 FER1L4A9Z1Z3 1794 aa18.73■□□□□ 0.59
RAB40B-206ENST00000571995 XBP1P17861 261 aa18.73■□□□□ 0.59
RAB40B-206ENST00000571995 PDE4CQ08493 712 aa18.73■□□□□ 0.59
RAB40B-206ENST00000571995 GOLGA8FQ08AF8 430 aa18.73■□□□□ 0.59
RAB40B-206ENST00000571995 GOLGA8DPQ0D2H9 430 aa18.73■□□□□ 0.59
RAB40B-206ENST00000571995 CCNL1Q9UK58 526 aaPredicted RBP18.73■□□□□ 0.59
RAB40B-206ENST00000571995 JMYQ8N9B5 988 aa18.73■□□□□ 0.59
RAB40B-206ENST00000571995 EEF2KMTQ96G04 330 aa18.73■□□□□ 0.59
RAB40B-206ENST00000571995 BTBD18B2RXH4 712 aa18.73■□□□□ 0.59
RAB40B-206ENST00000571995 UVSSAQ2YD98 709 aa18.73■□□□□ 0.59
RAB40B-206ENST00000571995 LCORLQ8N3X6 602 aa18.73■□□□□ 0.59
RAB40B-206ENST00000571995 GOLPH3LQ9H4A5 285 aa18.73■□□□□ 0.59
RAB40B-206ENST00000571995 V9GY48 417 aaPredicted RBP18.73■□□□□ 0.59
RAB40B-206ENST00000571995 COL15A1P39059 1388 aa18.72■□□□□ 0.59
RAB40B-206ENST00000571995 SKILP12757 684 aa18.72■□□□□ 0.59
RAB40B-206ENST00000571995 CYB5R4Q7L1T6 521 aa18.72■□□□□ 0.59
RAB40B-206ENST00000571995 MAPK8IP1Q9UQF2 711 aa18.72■□□□□ 0.59
RAB40B-206ENST00000571995 USP42Q9H9J4 1324 aaKnown RBP18.72■□□□□ 0.59
RAB40B-206ENST00000571995 SMIM22K7EJ46 135 aa18.72■□□□□ 0.59
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