RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 PTMSP20962 102 aa23.03■■□□□ 1.28
RPAIN-210ENST00000571613 FGD1P98174 961 aa23.03■■□□□ 1.28
RPAIN-210ENST00000571613 TRDNQ13061 729 aa23.03■■□□□ 1.28
RPAIN-210ENST00000571613 TTLL5Q6EMB2 1281 aa23.03■■□□□ 1.28
RPAIN-210ENST00000571613 STOX1Q6ZVD7 989 aa23.03■■□□□ 1.28
RPAIN-210ENST00000571613 CCDC125Q86Z20 511 aa23.03■■□□□ 1.28
RPAIN-210ENST00000571613 NCOA7Q8NI08 942 aa23.03■■□□□ 1.28
RPAIN-210ENST00000571613 TNPO1Q92973 898 aaKnown RBP23.03■■□□□ 1.28
RPAIN-210ENST00000571613 NAPBQ9H115 298 aa23.03■■□□□ 1.28
RPAIN-210ENST00000571613 WDR19Q8NEZ3 1342 aa23.02■■□□□ 1.28
RPAIN-210ENST00000571613 MAGEB6P1A0A0J9YX57 407 aa23.02■■□□□ 1.28
RPAIN-210ENST00000571613 EXOSC10Q01780 885 aaKnown RBP23.02■■□□□ 1.28
RPAIN-210ENST00000571613 TOB2Q14106 344 aaPredicted RBP23.02■■□□□ 1.28
RPAIN-210ENST00000571613 CLEC17AQ6ZS10 378 aa23.02■■□□□ 1.28
RPAIN-210ENST00000571613 RALYLQ86SE5 291 aaKnown RBP23.02■■□□□ 1.28
RPAIN-210ENST00000571613 TXNRD3Q86VQ6 643 aa23.02■■□□□ 1.28
RPAIN-210ENST00000571613 IFNL3Q8IZI9 196 aa23.02■■□□□ 1.28
RPAIN-210ENST00000571613 AGXT2Q9BYV1 514 aa23.02■■□□□ 1.28
RPAIN-210ENST00000571613 ARMT1Q9H993 441 aa23.02■■□□□ 1.28
RPAIN-210ENST00000571613 SMC3Q9UQE7 1217 aa23.02■■□□□ 1.28
RPAIN-210ENST00000571613 ANKRD31Q8N7Z5 1873 aa23.01■■□□□ 1.27
RPAIN-210ENST00000571613 DDX11L8A8MPP1 907 aa23.01■■□□□ 1.27
RPAIN-210ENST00000571613 MCM4P33991 863 aa23.01■■□□□ 1.27
RPAIN-210ENST00000571613 CHAF1AQ13111 956 aaPredicted RBP23.01■■□□□ 1.27
RPAIN-210ENST00000571613 MSL1Q68DK7 614 aa23.01■■□□□ 1.27
RPAIN-210ENST00000571613 STYK1Q6J9G0 422 aa23.01■■□□□ 1.27
RPAIN-210ENST00000571613 Q6ZUG5 572 aa23.01■■□□□ 1.27
RPAIN-210ENST00000571613 TBC1D16Q8TBP0 767 aa23.01■■□□□ 1.27
RPAIN-210ENST00000571613 TPCN1Q9ULQ1 816 aa23.01■■□□□ 1.27
RPAIN-210ENST00000571613 ME3Q16798 604 aa23■■□□□ 1.27
RPAIN-210ENST00000571613 NSUN4Q96CB9 384 aaKnown RBP23■■□□□ 1.27
RPAIN-210ENST00000571613 SLC4A4Q9Y6R1 1079 aa23■■□□□ 1.27
RPAIN-210ENST00000571613 MYH13Q9UKX3 1938 aa23■■□□□ 1.27
RPAIN-210ENST00000571613 LRRC37AA6NMS7 1700 aa23■■□□□ 1.27
RPAIN-210ENST00000571613 DUOX1Q9NRD9 1551 aa23■■□□□ 1.27
RPAIN-210ENST00000571613 H0YIN7 160 aa23■■□□□ 1.27
RPAIN-210ENST00000571613 IL1R1P14778 569 aa23■■□□□ 1.27
RPAIN-210ENST00000571613 MCM5P33992 734 aa23■■□□□ 1.27
RPAIN-210ENST00000571613 LCORLQ8N3X6 602 aa23■■□□□ 1.27
RPAIN-210ENST00000571613 SLC16A10Q8TF71 515 aa23■■□□□ 1.27
RPAIN-210ENST00000571613 GSG1L2A8MUP6 293 aa22.99■■□□□ 1.27
RPAIN-210ENST00000571613 GSTO1P78417 241 aa22.99■■□□□ 1.27
RPAIN-210ENST00000571613 GIMAP6Q6P9H5 292 aa22.99■■□□□ 1.27
RPAIN-210ENST00000571613 CD209Q9NNX6 404 aa22.99■■□□□ 1.27
RPAIN-210ENST00000571613 GOLGA6L22H0YM25 854 aa22.98■■□□□ 1.27
RPAIN-210ENST00000571613 C6orf229H3BNL8 230 aa22.98■■□□□ 1.27
RPAIN-210ENST00000571613 HAND2P61296 217 aa22.98■■□□□ 1.27
RPAIN-210ENST00000571613 MECOMQ03112 1051 aa22.98■■□□□ 1.27
RPAIN-210ENST00000571613 CCDC83Q8IWF9 413 aa22.98■■□□□ 1.27
RPAIN-210ENST00000571613 LDHBP07195 334 aaKnown RBP22.97■■□□□ 1.27
RPAIN-210ENST00000571613 TDO2P48775 406 aa22.97■■□□□ 1.27
RPAIN-210ENST00000571613 DZIP1Q86YF9 867 aaKnown RBP22.97■■□□□ 1.27
RPAIN-210ENST00000571613 C2CD5Q86YS7 1000 aa22.97■■□□□ 1.27
RPAIN-210ENST00000571613 CERS3Q8IU89 383 aa22.97■■□□□ 1.27
RPAIN-210ENST00000571613 MPNDQ8N594 471 aa22.97■■□□□ 1.27
RPAIN-210ENST00000571613 MIGA1Q8NAN2 632 aa22.97■■□□□ 1.27
RPAIN-210ENST00000571613 TBC1D22AQ8WUA7 517 aa22.97■■□□□ 1.27
RPAIN-210ENST00000571613 TCEANC2Q96MN5 208 aa22.97■■□□□ 1.27
RPAIN-210ENST00000571613 RIOK1Q9BRS2 568 aaKnown RBP22.97■■□□□ 1.27
RPAIN-210ENST00000571613 CNNM2Q9H8M5 875 aa22.97■■□□□ 1.27
RPAIN-210ENST00000571613 POLLQ9UGP5 575 aa22.97■■□□□ 1.27
RPAIN-210ENST00000571613 CNKSR1Q969H4 720 aa22.97■■□□□ 1.27
RPAIN-210ENST00000571613 LARP6Q9BRS8 491 aaKnown RBP22.97■■□□□ 1.27
RPAIN-210ENST00000571613 WDR33Q9C0J8 1336 aaKnown RBP22.96■■□□□ 1.27
RPAIN-210ENST00000571613 CACNA1SQ13698 1873 aa22.96■■□□□ 1.27
RPAIN-210ENST00000571613 LARGE1O95461 756 aa22.96■■□□□ 1.27
RPAIN-210ENST00000571613 LDHCP07864 332 aa22.96■■□□□ 1.27
RPAIN-210ENST00000571613 MB21D2Q8IYB1 491 aaPredicted RBP22.96■■□□□ 1.27
RPAIN-210ENST00000571613 BRF1Q92994 677 aa22.96■■□□□ 1.27
RPAIN-210ENST00000571613 COA1Q9GZY4 146 aa22.96■■□□□ 1.27
RPAIN-210ENST00000571613 RNF41Q9H4P4 317 aaPredicted RBP22.96■■□□□ 1.27
RPAIN-210ENST00000571613 EPB41L4AQ9HCS5 686 aaPredicted RBP22.96■■□□□ 1.27
RPAIN-210ENST00000571613 A0A0G2JLW4 131 aa22.95■■□□□ 1.26
RPAIN-210ENST00000571613 BRD1O95696 1058 aa22.95■■□□□ 1.26
RPAIN-210ENST00000571613 ZNF622Q969S3 477 aaKnown RBP eCLIP22.95■■□□□ 1.26
RPAIN-210ENST00000571613 ZNF274Q96GC6 653 aaPredicted RBP22.95■■□□□ 1.26
RPAIN-210ENST00000571613 EYA3Q99504 573 aa22.95■■□□□ 1.26
RPAIN-210ENST00000571613 MAST2Q6P0Q8 1798 aa22.94■■□□□ 1.26
RPAIN-210ENST00000571613 PDCP20941 246 aa22.94■■□□□ 1.26
RPAIN-210ENST00000571613 PRDX5P30044 214 aa22.94■■□□□ 1.26
RPAIN-210ENST00000571613 DPP8Q6V1X1 898 aaPredicted RBP22.94■■□□□ 1.26
RPAIN-210ENST00000571613 DEFB132Q7Z7B7 95 aa22.94■■□□□ 1.26
RPAIN-210ENST00000571613 ADGRA1Q86SQ6 560 aa22.94■■□□□ 1.26
RPAIN-210ENST00000571613 CRNKL1Q9BZJ0 848 aaKnown RBP22.94■■□□□ 1.26
RPAIN-210ENST00000571613 KRT23Q9C075 422 aa22.94■■□□□ 1.26
RPAIN-210ENST00000571613 ZC3H12CQ9C0D7 883 aaKnown RBP22.94■■□□□ 1.26
RPAIN-210ENST00000571613 EVCP57679 992 aa22.93■■□□□ 1.26
RPAIN-210ENST00000571613 COL9A3Q14050 684 aaPredicted RBP22.93■■□□□ 1.26
RPAIN-210ENST00000571613 SLF2Q8IX21 1173 aa22.93■■□□□ 1.26
RPAIN-210ENST00000571613 GTF3C6Q969F1 213 aa22.93■■□□□ 1.26
RPAIN-210ENST00000571613 LLPHQ9BRT6 129 aaKnown RBP22.93■■□□□ 1.26
RPAIN-210ENST00000571613 LAMA4Q16363 1823 aa22.93■■□□□ 1.26
RPAIN-210ENST00000571613 PRC1O43663 620 aa22.93■■□□□ 1.26
RPAIN-210ENST00000571613 PFKFB2O60825 505 aa22.93■■□□□ 1.26
RPAIN-210ENST00000571613 PCP11498 1178 aaKnown RBP22.93■■□□□ 1.26
RPAIN-210ENST00000571613 CC2D2BQ6DHV5 1058 aa22.93■■□□□ 1.26
RPAIN-210ENST00000571613 NOL10Q9BSC4 688 aaKnown RBP22.93■■□□□ 1.26
RPAIN-210ENST00000571613 MTA3Q9BTC8 594 aa22.93■■□□□ 1.26
RPAIN-210ENST00000571613 ANAPC4Q9UJX5 808 aa22.93■■□□□ 1.26
RPAIN-210ENST00000571613 LTBP1Q14766 1721 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms