RNA–Protein interactions for RNA: ENST00000571309.1

PSMB6-202, Transcript of proteasome subunit beta 6, humanhuman

TSL 3

Gene PSMB6, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB6-202ENST00000571309 TDRD3Q9H7E2 651 aaKnown RBP17.27■□□□□ 0.36
PSMB6-202ENST00000571309 IQSEC3Q9UPP2 1182 aaPredicted RBP17.27■□□□□ 0.36
PSMB6-202ENST00000571309 GPR25O00155 361 aa17.26■□□□□ 0.35
PSMB6-202ENST00000571309 EYA2O00167 538 aa17.26■□□□□ 0.35
PSMB6-202ENST00000571309 IREB2P48200 963 aaKnown RBP17.26■□□□□ 0.35
PSMB6-202ENST00000571309 BCAMP50895 628 aa17.26■□□□□ 0.35
PSMB6-202ENST00000571309 INHBEP58166 350 aa17.26■□□□□ 0.35
PSMB6-202ENST00000571309 CHAF1AQ13111 956 aaPredicted RBP17.26■□□□□ 0.35
PSMB6-202ENST00000571309 PUM3Q15397 648 aaKnown RBP17.26■□□□□ 0.35
PSMB6-202ENST00000571309 CCER2I3L3R5 266 aa17.25■□□□□ 0.35
PSMB6-202ENST00000571309 FRAT2O75474 233 aaPredicted RBP17.25■□□□□ 0.35
PSMB6-202ENST00000571309 ALDH1A1P00352 501 aa17.25■□□□□ 0.35
PSMB6-202ENST00000571309 IFIT1P09914 478 aaKnown RBP17.25■□□□□ 0.35
PSMB6-202ENST00000571309 PKN2Q16513 984 aaKnown RBP17.25■□□□□ 0.35
PSMB6-202ENST00000571309 TEPSINQ96N21 525 aa17.25■□□□□ 0.35
PSMB6-202ENST00000571309 MRIQ9BWK5 157 aa17.25■□□□□ 0.35
PSMB6-202ENST00000571309 NOB1Q9ULX3 412 aaKnown RBP17.25■□□□□ 0.35
PSMB6-202ENST00000571309 ATG9AQ7Z3C6 839 aa17.24■□□□□ 0.35
PSMB6-202ENST00000571309 IFNL1Q8IU54 200 aa17.24■□□□□ 0.35
PSMB6-202ENST00000571309 ANKRD13AQ8IZ07 590 aa17.24■□□□□ 0.35
PSMB6-202ENST00000571309 R3HDMLQ9H3Y0 253 aa17.24■□□□□ 0.35
PSMB6-202ENST00000571309 SUGT1Q9Y2Z0 365 aa17.24■□□□□ 0.35
PSMB6-202ENST00000571309 OTOFQ9HC10 1997 aa17.24■□□□□ 0.35
PSMB6-202ENST00000571309 TCP10L2B9ZVM9 353 aa17.23■□□□□ 0.35
PSMB6-202ENST00000571309 UBTFL1P0CB47 393 aaPredicted RBP17.23■□□□□ 0.35
PSMB6-202ENST00000571309 TNNI2P48788 182 aa17.23■□□□□ 0.35
PSMB6-202ENST00000571309 LPIN2Q92539 896 aa17.23■□□□□ 0.35
PSMB6-202ENST00000571309 TEKT1Q969V4 418 aa17.23■□□□□ 0.35
PSMB6-202ENST00000571309 ZDHHC15Q96MV8 337 aa17.23■□□□□ 0.35
PSMB6-202ENST00000571309 API5Q9BZZ5 524 aaKnown RBP17.23■□□□□ 0.35
PSMB6-202ENST00000571309 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.23■□□□□ 0.35
PSMB6-202ENST00000571309 FBXO3Q9UK99 471 aa17.23■□□□□ 0.35
PSMB6-202ENST00000571309 FKTNO75072 461 aa17.22■□□□□ 0.35
PSMB6-202ENST00000571309 CIAO1O76071 339 aa17.22■□□□□ 0.35
PSMB6-202ENST00000571309 SLC5A1P13866 664 aa17.22■□□□□ 0.35
PSMB6-202ENST00000571309 GJA5P36382 358 aa17.22■□□□□ 0.35
PSMB6-202ENST00000571309 CDAN1Q8IWY9 1227 aa17.22■□□□□ 0.35
PSMB6-202ENST00000571309 TMEM39BQ9GZU3 492 aa17.22■□□□□ 0.35
PSMB6-202ENST00000571309 HPS5Q9UPZ3 1129 aa17.22■□□□□ 0.35
PSMB6-202ENST00000571309 IGF2BP3O00425 579 aaKnown RBP eCLIP17.21■□□□□ 0.35
PSMB6-202ENST00000571309 MYH13Q9UKX3 1938 aa17.21■□□□□ 0.35
PSMB6-202ENST00000571309 MAST3O60307 1309 aa17.21■□□□□ 0.34
PSMB6-202ENST00000571309 TESPA1A2RU30 521 aaPredicted RBP17.2■□□□□ 0.34
PSMB6-202ENST00000571309 RARSP54136 660 aaKnown RBP17.2■□□□□ 0.34
PSMB6-202ENST00000571309 APOBEC3HQ6NTF7 200 aaKnown RBP17.2■□□□□ 0.34
PSMB6-202ENST00000571309 HHIPL2Q6UWX4 724 aa17.2■□□□□ 0.34
PSMB6-202ENST00000571309 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.2■□□□□ 0.34
PSMB6-202ENST00000571309 WDR66Q8TBY9 1149 aa17.2■□□□□ 0.34
PSMB6-202ENST00000571309 HDAC5Q9UQL6 1122 aa17.2■□□□□ 0.34
PSMB6-202ENST00000571309 CACNB3P54284 484 aa17.19■□□□□ 0.34
PSMB6-202ENST00000571309 SOX10P56693 466 aa17.19■□□□□ 0.34
PSMB6-202ENST00000571309 FKBP1CQ5VVH2 108 aa17.19■□□□□ 0.34
PSMB6-202ENST00000571309 FAM83AQ86UY5 434 aa17.19■□□□□ 0.34
PSMB6-202ENST00000571309 OPTNQ96CV9 577 aa17.19■□□□□ 0.34
PSMB6-202ENST00000571309 SIL1Q9H173 461 aa17.19■□□□□ 0.34
PSMB6-202ENST00000571309 ELP3Q9H9T3 547 aa17.19■□□□□ 0.34
PSMB6-202ENST00000571309 LRRFIP2Q9Y608 721 aaKnown RBP17.19■□□□□ 0.34
PSMB6-202ENST00000571309 TNRC18O15417 2968 aaPredicted RBP17.19■□□□□ 0.34
PSMB6-202ENST00000571309 MAP3K9P80192 1104 aa17.18■□□□□ 0.34
PSMB6-202ENST00000571309 ATP2B3Q16720 1220 aa17.18■□□□□ 0.34
PSMB6-202ENST00000571309 OTUD7BQ6GQQ9 843 aa17.18■□□□□ 0.34
PSMB6-202ENST00000571309 FBXO46Q6PJ61 603 aaPredicted RBP17.18■□□□□ 0.34
PSMB6-202ENST00000571309 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.18■□□□□ 0.345e-7■■■■■ 31.7
PSMB6-202ENST00000571309 ARHGAP45Q92619 1136 aa17.18■□□□□ 0.34
PSMB6-202ENST00000571309 PTPN18Q99952 460 aa17.18■□□□□ 0.34
PSMB6-202ENST00000571309 TMOD2Q9NZR1 351 aa17.18■□□□□ 0.34
PSMB6-202ENST00000571309 CEP126Q9P2H0 1117 aa17.18■□□□□ 0.34
PSMB6-202ENST00000571309 IL15P40933 162 aaPredicted RBP17.17■□□□□ 0.34
PSMB6-202ENST00000571309 VGLL4Q14135 290 aa17.17■□□□□ 0.34
PSMB6-202ENST00000571309 INTS3Q68E01 1043 aaKnown RBP17.17■□□□□ 0.34
PSMB6-202ENST00000571309 MS4A4AQ96JQ5 239 aa17.17■□□□□ 0.34
PSMB6-202ENST00000571309 MEIS3Q99687 375 aa17.17■□□□□ 0.34
PSMB6-202ENST00000571309 COPRSQ9NQ92 184 aa17.17■□□□□ 0.34
PSMB6-202ENST00000571309 ZBTB22O15209 634 aa17.16■□□□□ 0.34
PSMB6-202ENST00000571309 CRHR2Q13324 411 aa17.16■□□□□ 0.34
PSMB6-202ENST00000571309 CNKSR2Q8WXI2 1034 aa17.16■□□□□ 0.34
PSMB6-202ENST00000571309 GNL3LQ9NVN8 582 aaKnown RBP17.16■□□□□ 0.34
PSMB6-202ENST00000571309 PA2G4Q9UQ80 394 aaKnown RBP17.16■□□□□ 0.34
PSMB6-202ENST00000571309 RPAP1Q9BWH6 1393 aaPredicted RBP17.15■□□□□ 0.34
PSMB6-202ENST00000571309 SEMA3EO15041 775 aa17.15■□□□□ 0.34
PSMB6-202ENST00000571309 HOOK2Q96ED9 719 aa17.15■□□□□ 0.34
PSMB6-202ENST00000571309 CSADQ9Y600 493 aa17.15■□□□□ 0.34
PSMB6-202ENST00000571309 SALL1Q9NSC2 1324 aa17.15■□□□□ 0.34
PSMB6-202ENST00000571309 BRI3BPQ8WY22 251 aa17.14■□□□□ 0.33
PSMB6-202ENST00000571309 DAGLAQ9Y4D2 1042 aa17.14■□□□□ 0.33
PSMB6-202ENST00000571309 SNCAIPQ9Y6H5 919 aa17.14■□□□□ 0.33
PSMB6-202ENST00000571309 SPDYE5A6NIY4 337 aa17.13■□□□□ 0.33
PSMB6-202ENST00000571309 GNAI3P08754 354 aa17.13■□□□□ 0.33
PSMB6-202ENST00000571309 PRDX5P30044 214 aa17.13■□□□□ 0.33
PSMB6-202ENST00000571309 PHKA1P46020 1223 aa17.13■□□□□ 0.33
PSMB6-202ENST00000571309 GTF2A2P52657 109 aa17.13■□□□□ 0.33
PSMB6-202ENST00000571309 DIXDC1Q155Q3 683 aa17.13■□□□□ 0.33
PSMB6-202ENST00000571309 OTOP1Q7RTM1 612 aa17.13■□□□□ 0.33
PSMB6-202ENST00000571309 OTUD5Q96G74 571 aa17.13■□□□□ 0.33
PSMB6-202ENST00000571309 ERO1AQ96HE7 468 aa17.13■□□□□ 0.33
PSMB6-202ENST00000571309 DENND2AQ9ULE3 1009 aa17.13■□□□□ 0.33
PSMB6-202ENST00000571309 TRIM17Q9Y577 477 aa17.13■□□□□ 0.33
PSMB6-202ENST00000571309 CCL15-CCL14A0A0B4J2E2 113 aa17.12■□□□□ 0.33
PSMB6-202ENST00000571309 LDHBP07195 334 aaKnown RBP17.12■□□□□ 0.33
PSMB6-202ENST00000571309 ADORA1P30542 326 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms