RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 PHKA1P46020 1223 aa20.62■□□□□ 0.89
RPAIN-208ENST00000571043 OSBP2Q969R2 916 aa20.62■□□□□ 0.89
RPAIN-208ENST00000571043 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.62■□□□□ 0.89
RPAIN-208ENST00000571043 ARAP2Q8WZ64 1704 aa20.62■□□□□ 0.89
RPAIN-208ENST00000571043 BAG4O95429 457 aaKnown RBP20.61■□□□□ 0.89
RPAIN-208ENST00000571043 HSPD1P10809 573 aaKnown RBP20.61■□□□□ 0.89
RPAIN-208ENST00000571043 FAM84BQ96KN1 310 aaPredicted RBP20.61■□□□□ 0.89
RPAIN-208ENST00000571043 PSMD1Q99460 953 aa20.61■□□□□ 0.89
RPAIN-208ENST00000571043 DUOX1Q9NRD9 1551 aa20.61■□□□□ 0.89
RPAIN-208ENST00000571043 GOLGA6L22H0YM25 854 aa20.6■□□□□ 0.89
RPAIN-208ENST00000571043 M0R2C6 588 aa20.6■□□□□ 0.89
RPAIN-208ENST00000571043 CYP21A2P08686 494 aa20.6■□□□□ 0.89
RPAIN-208ENST00000571043 SLFNL1Q499Z3 407 aa20.6■□□□□ 0.89
RPAIN-208ENST00000571043 TXNRD3Q86VQ6 643 aa20.6■□□□□ 0.89
RPAIN-208ENST00000571043 NEK1Q96PY6 1258 aa20.6■□□□□ 0.89
RPAIN-208ENST00000571043 ZDHHC9Q9Y397 364 aa20.6■□□□□ 0.89
RPAIN-208ENST00000571043 TRAK2O60296 914 aa20.59■□□□□ 0.89
RPAIN-208ENST00000571043 BRD1O95696 1058 aa20.59■□□□□ 0.89
RPAIN-208ENST00000571043 KLRK1P26718 216 aa20.59■□□□□ 0.89
RPAIN-208ENST00000571043 PKP1Q13835 747 aa20.59■□□□□ 0.89
RPAIN-208ENST00000571043 WASHC4Q2M389 1173 aa20.59■□□□□ 0.89
RPAIN-208ENST00000571043 PI16Q6UXB8 463 aa20.59■□□□□ 0.89
RPAIN-208ENST00000571043 FBXO33Q7Z6M2 555 aa20.59■□□□□ 0.89
RPAIN-208ENST00000571043 SUPT20HQ8NEM7 779 aa20.59■□□□□ 0.89
RPAIN-208ENST00000571043 TAF6LQ9Y6J9 622 aa20.59■□□□□ 0.89
RPAIN-208ENST00000571043 UTRNP46939 3433 aa20.59■□□□□ 0.89
RPAIN-208ENST00000571043 HMGB1P09429 215 aaKnown RBP20.58■□□□□ 0.89
RPAIN-208ENST00000571043 ADD2P35612 726 aa20.58■□□□□ 0.89
RPAIN-208ENST00000571043 UBE3CQ15386 1083 aa20.58■□□□□ 0.89
RPAIN-208ENST00000571043 SKOR2Q2VWA4 1001 aaPredicted RBP20.58■□□□□ 0.89
RPAIN-208ENST00000571043 CAVIN4Q5BKX8 364 aa20.58■□□□□ 0.89
RPAIN-208ENST00000571043 GPR101Q96P66 508 aaPredicted RBP20.58■□□□□ 0.89
RPAIN-208ENST00000571043 EYA3Q99504 573 aa20.58■□□□□ 0.89
RPAIN-208ENST00000571043 CTNNA3Q9UI47 895 aa20.58■□□□□ 0.89
RPAIN-208ENST00000571043 GYG1P46976 350 aa20.58■□□□□ 0.88
RPAIN-208ENST00000571043 BCAMP50895 628 aa20.58■□□□□ 0.88
RPAIN-208ENST00000571043 SPATA5Q8NB90 893 aa20.58■□□□□ 0.88
RPAIN-208ENST00000571043 ZC3H12CQ9C0D7 883 aaKnown RBP20.58■□□□□ 0.88
RPAIN-208ENST00000571043 PIH1D3Q9NQM4 214 aaKnown RBP20.58■□□□□ 0.88
RPAIN-208ENST00000571043 HIBADHP31937 336 aaKnown RBP20.57■□□□□ 0.88
RPAIN-208ENST00000571043 VPS33BQ9H267 617 aa20.57■□□□□ 0.88
RPAIN-208ENST00000571043 AKAP11Q9UKA4 1901 aa20.56■□□□□ 0.88
RPAIN-208ENST00000571043 ZBTB22O15209 634 aa20.56■□□□□ 0.88
RPAIN-208ENST00000571043 LARGE1O95461 756 aa20.55■□□□□ 0.88
RPAIN-208ENST00000571043 ME3Q16798 604 aa20.55■□□□□ 0.88
RPAIN-208ENST00000571043 SLC9C2Q5TAH2 1124 aa20.55■□□□□ 0.88
RPAIN-208ENST00000571043 PUS7LQ9H0K6 701 aaKnown RBP20.55■□□□□ 0.88
RPAIN-208ENST00000571043 TPCN1Q9ULQ1 816 aa20.55■□□□□ 0.88
RPAIN-208ENST00000571043 SMC3Q9UQE7 1217 aa20.55■□□□□ 0.88
RPAIN-208ENST00000571043 CHD4Q14839 1912 aa20.55■□□□□ 0.88
RPAIN-208ENST00000571043 WDR33Q9C0J8 1336 aaKnown RBP20.55■□□□□ 0.88
RPAIN-208ENST00000571043 LTBP3Q9NS15 1303 aa20.55■□□□□ 0.88
RPAIN-208ENST00000571043 NFKBIEO00221 500 aa20.54■□□□□ 0.88
RPAIN-208ENST00000571043 RIMBP2O15034 1052 aa20.54■□□□□ 0.88
RPAIN-208ENST00000571043 KIAA2012Q0VF49 1180 aa20.54■□□□□ 0.88
RPAIN-208ENST00000571043 RASGRF1Q13972 1273 aa20.54■□□□□ 0.88
RPAIN-208ENST00000571043 TOB2Q14106 344 aaPredicted RBP20.54■□□□□ 0.88
RPAIN-208ENST00000571043 VPS37DQ86XT2 251 aa20.54■□□□□ 0.88
RPAIN-208ENST00000571043 LARP6Q9BRS8 491 aaKnown RBP20.54■□□□□ 0.88
RPAIN-208ENST00000571043 TAOK3Q9H2K8 898 aa20.54■□□□□ 0.88
RPAIN-208ENST00000571043 CCDC88AQ3V6T2 1871 aa20.54■□□□□ 0.88
RPAIN-208ENST00000571043 GPAA1O43292 621 aa20.53■□□□□ 0.88
RPAIN-208ENST00000571043 IDH1O75874 414 aaKnown RBP20.53■□□□□ 0.88
RPAIN-208ENST00000571043 YBX3P16989 372 aaKnown RBP eCLIP20.53■□□□□ 0.881e-7■□□□□ 10.3
RPAIN-208ENST00000571043 STOX1Q6ZVD7 989 aa20.53■□□□□ 0.88
RPAIN-208ENST00000571043 ZNF804AQ7Z570 1209 aa20.53■□□□□ 0.88
RPAIN-208ENST00000571043 CCDC83Q8IWF9 413 aa20.53■□□□□ 0.88
RPAIN-208ENST00000571043 GNL3LQ9NVN8 582 aaKnown RBP20.53■□□□□ 0.88
RPAIN-208ENST00000571043 FOXP2O15409 715 aa20.53■□□□□ 0.88
RPAIN-208ENST00000571043 PDIA4P13667 645 aaKnown RBP20.53■□□□□ 0.88
RPAIN-208ENST00000571043 PDE6AP16499 860 aa20.53■□□□□ 0.88
RPAIN-208ENST00000571043 MAP3K12Q12852 859 aa20.53■□□□□ 0.88
RPAIN-208ENST00000571043 COL9A3Q14050 684 aaPredicted RBP20.53■□□□□ 0.88
RPAIN-208ENST00000571043 DHX32Q7L7V1 743 aaKnown RBP20.53■□□□□ 0.88
RPAIN-208ENST00000571043 TDRD7Q8NHU6 1098 aaKnown RBP20.53■□□□□ 0.88
RPAIN-208ENST00000571043 COA1Q9GZY4 146 aa20.53■□□□□ 0.88
RPAIN-208ENST00000571043 CD209Q9NNX6 404 aa20.53■□□□□ 0.88
RPAIN-208ENST00000571043 TCRBV5S4A2TA0A5A2 114 aa20.52■□□□□ 0.87
RPAIN-208ENST00000571043 IL1R1P14778 569 aa20.52■□□□□ 0.87
RPAIN-208ENST00000571043 ZNF277Q9NRM2 450 aaPredicted RBP20.52■□□□□ 0.87
RPAIN-208ENST00000571043 ZNF532Q9HCE3 1301 aa20.52■□□□□ 0.87
RPAIN-208ENST00000571043 MYH13Q9UKX3 1938 aa20.51■□□□□ 0.87
RPAIN-208ENST00000571043 E7EWF7 191 aa20.51■□□□□ 0.87
RPAIN-208ENST00000571043 SEMA3EO15041 775 aa20.51■□□□□ 0.87
RPAIN-208ENST00000571043 ST3GAL1Q11201 340 aa20.51■□□□□ 0.87
RPAIN-208ENST00000571043 AOC3Q16853 763 aa20.51■□□□□ 0.87
RPAIN-208ENST00000571043 IMMTQ16891 758 aaKnown RBP20.51■□□□□ 0.87
RPAIN-208ENST00000571043 ARHGAP27Q6ZUM4 889 aa20.51■□□□□ 0.87
RPAIN-208ENST00000571043 SBF1O95248 1867 aa20.51■□□□□ 0.87
RPAIN-208ENST00000571043 PPIP5K2O43314 1243 aa20.5■□□□□ 0.87
RPAIN-208ENST00000571043 FGAP02671 866 aa20.5■□□□□ 0.87
RPAIN-208ENST00000571043 IARSP41252 1262 aaKnown RBP20.5■□□□□ 0.87
RPAIN-208ENST00000571043 EXOSC10Q01780 885 aaKnown RBP20.5■□□□□ 0.87
RPAIN-208ENST00000571043 MCTP1Q6DN14 999 aa20.5■□□□□ 0.87
RPAIN-208ENST00000571043 PODNQ7Z5L7 613 aa20.5■□□□□ 0.87
RPAIN-208ENST00000571043 TCEANC2Q96MN5 208 aa20.5■□□□□ 0.87
RPAIN-208ENST00000571043 Q6ZUG5 572 aa20.49■□□□□ 0.87
RPAIN-208ENST00000571043 FBXL16Q8N461 479 aa20.49■□□□□ 0.87
RPAIN-208ENST00000571043 AGXT2Q9BYV1 514 aa20.49■□□□□ 0.87
RPAIN-208ENST00000571043 DENND2AQ9ULE3 1009 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms