RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 MYCP01106 439 aaPredicted RBP16.59■□□□□ 0.25
CCDC40-205ENST00000571028 ITGA6P23229 1130 aa16.59■□□□□ 0.25
CCDC40-205ENST00000571028 ANKRD13AQ8IZ07 590 aa16.59■□□□□ 0.25
CCDC40-205ENST00000571028 KAZALD1Q96I82 304 aa16.59■□□□□ 0.25
CCDC40-205ENST00000571028 ZBED3Q96IU2 234 aaPredicted RBP16.59■□□□□ 0.25
CCDC40-205ENST00000571028 ANKRD2Q9GZV1 360 aa16.59■□□□□ 0.25
CCDC40-205ENST00000571028 C1orf115Q9H7X2 142 aa16.59■□□□□ 0.25
CCDC40-205ENST00000571028 CLRN2A0PK11 232 aa16.58■□□□□ 0.24
CCDC40-205ENST00000571028 H0YGN5 161 aa16.58■□□□□ 0.24
CCDC40-205ENST00000571028 CSF1RP07333 972 aa16.58■□□□□ 0.24
CCDC40-205ENST00000571028 MVPQ14764 893 aaKnown RBP16.58■□□□□ 0.24
CCDC40-205ENST00000571028 TAF7LQ5H9L4 462 aa16.58■□□□□ 0.24
CCDC40-205ENST00000571028 TXNRD3Q86VQ6 643 aa16.58■□□□□ 0.24
CCDC40-205ENST00000571028 MPHOSPH8Q99549 860 aa16.58■□□□□ 0.24
CCDC40-205ENST00000571028 PTCH2Q9Y6C5 1203 aa16.58■□□□□ 0.24
CCDC40-205ENST00000571028 CENPFP49454 3210 aa16.57■□□□□ 0.24
CCDC40-205ENST00000571028 SSC5DA1L4H1 1573 aa16.57■□□□□ 0.24
CCDC40-205ENST00000571028 ANKRD18BA2A2Z9 1011 aa16.57■□□□□ 0.24
CCDC40-205ENST00000571028 F8W031 263 aaPredicted RBP16.57■□□□□ 0.24
CCDC40-205ENST00000571028 RBM5P52756 815 aaKnown RBP eCLIP16.57■□□□□ 0.24
CCDC40-205ENST00000571028 IFIT5Q13325 482 aaKnown RBP16.57■□□□□ 0.24
CCDC40-205ENST00000571028 CCDC57Q2TAC2 916 aa16.57■□□□□ 0.24
CCDC40-205ENST00000571028 ANKRD44Q8N8A2 993 aa16.57■□□□□ 0.24
CCDC40-205ENST00000571028 ZNF594Q96JF6 807 aaPredicted RBP16.57■□□□□ 0.24
CCDC40-205ENST00000571028 ZFYVE28Q9HCC9 887 aa16.57■□□□□ 0.24
CCDC40-205ENST00000571028 HDAC5Q9UQL6 1122 aa16.57■□□□□ 0.24
CCDC40-205ENST00000571028 GNAI2P04899 355 aa16.56■□□□□ 0.24
CCDC40-205ENST00000571028 PDE3AQ14432 1141 aa16.56■□□□□ 0.24
CCDC40-205ENST00000571028 KIF22Q14807 665 aa16.56■□□□□ 0.24
CCDC40-205ENST00000571028 TAF1CQ15572 869 aaPredicted RBP16.56■□□□□ 0.24
CCDC40-205ENST00000571028 NBPF12Q5TAG4 269 aaPredicted RBP16.56■□□□□ 0.24
CCDC40-205ENST00000571028 CHRDL2Q6WN34 429 aa16.56■□□□□ 0.24
CCDC40-205ENST00000571028 MTMR14Q8NCE2 650 aa16.56■□□□□ 0.24
CCDC40-205ENST00000571028 OPTNQ96CV9 577 aa16.56■□□□□ 0.24
CCDC40-205ENST00000571028 ELP3Q9H9T3 547 aa16.56■□□□□ 0.24
CCDC40-205ENST00000571028 ZBTB7BO15156 539 aaPredicted RBP16.55■□□□□ 0.24
CCDC40-205ENST00000571028 KLRK1P26718 216 aa16.55■□□□□ 0.24
CCDC40-205ENST00000571028 GJA5P36382 358 aa16.55■□□□□ 0.24
CCDC40-205ENST00000571028 CFAP100Q494V2 611 aa16.55■□□□□ 0.24
CCDC40-205ENST00000571028 PTPN18Q99952 460 aa16.55■□□□□ 0.24
CCDC40-205ENST00000571028 DDX19BQ9UMR2 479 aa16.55■□□□□ 0.24
CCDC40-205ENST00000571028 TESPA1A2RU30 521 aaPredicted RBP16.54■□□□□ 0.24
CCDC40-205ENST00000571028 SPDYE2BA6NHP3 402 aa16.54■□□□□ 0.24
CCDC40-205ENST00000571028 SPDYE6P0CI01 402 aa16.54■□□□□ 0.24
CCDC40-205ENST00000571028 TNFAIP1Q13829 316 aa16.54■□□□□ 0.24
CCDC40-205ENST00000571028 KLHDC4Q8TBB5 520 aa16.54■□□□□ 0.24
CCDC40-205ENST00000571028 DPF3Q92784 378 aa16.54■□□□□ 0.24
CCDC40-205ENST00000571028 CD209Q9NNX6 404 aa16.54■□□□□ 0.24
CCDC40-205ENST00000571028 BRCA2P51587 3418 aa16.54■□□□□ 0.24
CCDC40-205ENST00000571028 CCL15-CCL14A0A0B4J2E2 113 aa16.53■□□□□ 0.24
CCDC40-205ENST00000571028 DLL1O00548 723 aa16.53■□□□□ 0.24
CCDC40-205ENST00000571028 USP2O75604 605 aaPredicted RBP16.53■□□□□ 0.24
CCDC40-205ENST00000571028 GTF2A2P52657 109 aa16.53■□□□□ 0.24
CCDC40-205ENST00000571028 IRX6P78412 446 aaPredicted RBP16.53■□□□□ 0.24
CCDC40-205ENST00000571028 RASA3Q14644 834 aa16.53■□□□□ 0.24
CCDC40-205ENST00000571028 CCL15Q16663 113 aa16.53■□□□□ 0.24
CCDC40-205ENST00000571028 RABL6Q3YEC7 729 aaPredicted RBP16.53■□□□□ 0.24
CCDC40-205ENST00000571028 ZNF804AQ7Z570 1209 aa16.53■□□□□ 0.24
CCDC40-205ENST00000571028 SLC17A8Q8NDX2 589 aa16.53■□□□□ 0.24
CCDC40-205ENST00000571028 OTUD5Q96G74 571 aa16.53■□□□□ 0.24
CCDC40-205ENST00000571028 CRBNQ96SW2 442 aa16.53■□□□□ 0.24
CCDC40-205ENST00000571028 KIAA0100Q14667 2235 aaKnown RBP16.53■□□□□ 0.24
CCDC40-205ENST00000571028 CAP1Q01518 475 aa16.52■□□□□ 0.24
CCDC40-205ENST00000571028 CERS5Q8N5B7 392 aa16.52■□□□□ 0.24
CCDC40-205ENST00000571028 SH3TC2Q8TF17 1288 aa16.52■□□□□ 0.24
CCDC40-205ENST00000571028 PCDHAC2Q9Y5I4 1007 aa16.52■□□□□ 0.24
CCDC40-205ENST00000571028 SRGAP3O43295 1099 aa16.51■□□□□ 0.23
CCDC40-205ENST00000571028 CHRNDQ07001 517 aa16.51■□□□□ 0.23
CCDC40-205ENST00000571028 LDHAL6AQ6ZMR3 332 aa16.51■□□□□ 0.23
CCDC40-205ENST00000571028 PRMT6Q96LA8 375 aaPredicted RBP16.51■□□□□ 0.23
CCDC40-205ENST00000571028 CNNM1Q9NRU3 951 aa16.51■□□□□ 0.23
CCDC40-205ENST00000571028 CSADQ9Y600 493 aa16.51■□□□□ 0.23
CCDC40-205ENST00000571028 ZNF646O15015 1829 aaPredicted RBP16.5■□□□□ 0.23
CCDC40-205ENST00000571028 SPEF2Q9C093 1822 aa16.5■□□□□ 0.23
CCDC40-205ENST00000571028 HELBQ8NG08 1087 aaPredicted RBP16.5■□□□□ 0.23
CCDC40-205ENST00000571028 BRI3BPQ8WY22 251 aa16.5■□□□□ 0.23
CCDC40-205ENST00000571028 MS4A4AQ96JQ5 239 aa16.5■□□□□ 0.23
CCDC40-205ENST00000571028 PUS3Q9BZE2 481 aaKnown RBP16.5■□□□□ 0.23
CCDC40-205ENST00000571028 SIL1Q9H173 461 aa16.5■□□□□ 0.23
CCDC40-205ENST00000571028 RBM27Q9P2N5 1060 aaKnown RBP16.5■□□□□ 0.23
CCDC40-205ENST00000571028 PA2G4Q9UQ80 394 aaKnown RBP16.5■□□□□ 0.23
CCDC40-205ENST00000571028 PNMA6EA0A0J9YXQ4 647 aa16.49■□□□□ 0.23
CCDC40-205ENST00000571028 GNRH1P01148 92 aa16.49■□□□□ 0.23
CCDC40-205ENST00000571028 CENPBP07199 599 aaPredicted RBP16.49■□□□□ 0.23
CCDC40-205ENST00000571028 HTATIP2Q9BUP3 242 aa16.49■□□□□ 0.23
CCDC40-205ENST00000571028 CHMP4BQ9H444 224 aaKnown RBP16.49■□□□□ 0.23
CCDC40-205ENST00000571028 JAG2Q9Y219 1238 aa16.49■□□□□ 0.23
CCDC40-205ENST00000571028 MYH3P11055 1940 aa16.49■□□□□ 0.23
CCDC40-205ENST00000571028 RFX5P48382 616 aaPredicted RBP16.48■□□□□ 0.23
CCDC40-205ENST00000571028 TNNI2P48788 182 aa16.48■□□□□ 0.23
CCDC40-205ENST00000571028 PRMT2P55345 433 aa16.48■□□□□ 0.23
CCDC40-205ENST00000571028 FKBP1AP62942 108 aaKnown RBP16.48■□□□□ 0.23
CCDC40-205ENST00000571028 LACTBP83111 547 aaPredicted RBP16.48■□□□□ 0.23
CCDC40-205ENST00000571028 VGLL4Q14135 290 aa16.48■□□□□ 0.23
CCDC40-205ENST00000571028 LRRC24Q50LG9 513 aa16.48■□□□□ 0.23
CCDC40-205ENST00000571028 FAM43AQ8N2R8 423 aa16.48■□□□□ 0.23
CCDC40-205ENST00000571028 NKX2-3Q8TAU0 364 aa16.48■□□□□ 0.23
CCDC40-205ENST00000571028 CNKSR2Q8WXI2 1034 aa16.48■□□□□ 0.23
CCDC40-205ENST00000571028 ZBTB40Q9NUA8 1239 aa16.48■□□□□ 0.23
CCDC40-205ENST00000571028 LAMB1P07942 1786 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms