RNA–Protein interactions for RNA: ENST00000570989.1

ITGA3-216, Transcript of integrin subunit alpha 3, humanhuman

Gene ITGA3, Length 2,495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-216ENST00000570989 NCAPHQ15003 741 aa16.84■□□□□ 0.29
ITGA3-216ENST00000570989 FNBP4Q8N3X1 1017 aaPredicted RBP16.84■□□□□ 0.29
ITGA3-216ENST00000570989 MYD88Q99836 296 aa16.84■□□□□ 0.29
ITGA3-216ENST00000570989 AGXT2Q9BYV1 514 aa16.84■□□□□ 0.29
ITGA3-216ENST00000570989 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.84■□□□□ 0.29
ITGA3-216ENST00000570989 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.84■□□□□ 0.29
ITGA3-216ENST00000570989 A0A1B0GVL5 298 aa16.84■□□□□ 0.29
ITGA3-216ENST00000570989 SFPQP23246 707 aaKnown RBP eCLIP16.84■□□□□ 0.29
ITGA3-216ENST00000570989 KIAA1468Q9P260 1216 aa16.84■□□□□ 0.29
ITGA3-216ENST00000570989 ORC3Q9UBD5 711 aaPredicted RBP16.84■□□□□ 0.29
ITGA3-216ENST00000570989 CCT2P78371 535 aaKnown RBP16.83■□□□□ 0.28
ITGA3-216ENST00000570989 GCKRQ14397 625 aa16.83■□□□□ 0.28
ITGA3-216ENST00000570989 DHX32Q7L7V1 743 aaKnown RBP16.83■□□□□ 0.28
ITGA3-216ENST00000570989 ZFP91Q96JP5 570 aaPredicted RBP16.83■□□□□ 0.28
ITGA3-216ENST00000570989 A0A1W2PQ27 194 aa16.82■□□□□ 0.28
ITGA3-216ENST00000570989 A0A1W2PQ64 194 aa16.82■□□□□ 0.28
ITGA3-216ENST00000570989 A0A1W2PQD8 194 aa16.82■□□□□ 0.28
ITGA3-216ENST00000570989 NBPF26B4DH59 902 aa16.82■□□□□ 0.28
ITGA3-216ENST00000570989 PTCD1O75127 700 aaKnown RBP16.82■□□□□ 0.28
ITGA3-216ENST00000570989 ETF1P62495 437 aaKnown RBP16.82■□□□□ 0.28
ITGA3-216ENST00000570989 EXOSC10Q01780 885 aaKnown RBP16.82■□□□□ 0.28
ITGA3-216ENST00000570989 NBPF14Q5TI25 921 aa16.82■□□□□ 0.28
ITGA3-216ENST00000570989 NBPF10Q6P3W6 841 aaKnown RBP16.82■□□□□ 0.28
ITGA3-216ENST00000570989 NBPF15Q8N660 670 aa16.82■□□□□ 0.28
ITGA3-216ENST00000570989 SDF4Q9BRK5 362 aa16.82■□□□□ 0.28
ITGA3-216ENST00000570989 MCMDC2Q4G0Z9 681 aa16.82■□□□□ 0.28
ITGA3-216ENST00000570989 ADALQ6DHV7 355 aa16.82■□□□□ 0.28
ITGA3-216ENST00000570989 TRIM65Q6PJ69 517 aa16.82■□□□□ 0.28
ITGA3-216ENST00000570989 RTEL1Q9NZ71 1219 aa16.82■□□□□ 0.28
ITGA3-216ENST00000570989 PHLPP2Q6ZVD8 1323 aa16.82■□□□□ 0.28
ITGA3-216ENST00000570989 HNRNPH2P55795 449 aaKnown RBP16.81■□□□□ 0.28
ITGA3-216ENST00000570989 HSD3B7Q9H2F3 369 aa16.81■□□□□ 0.28
ITGA3-216ENST00000570989 TMOD3Q9NYL9 352 aa16.81■□□□□ 0.28
ITGA3-216ENST00000570989 USP21Q9UK80 565 aa16.81■□□□□ 0.28
ITGA3-216ENST00000570989 WNK3Q9BYP7 1800 aa16.81■□□□□ 0.28
ITGA3-216ENST00000570989 CARMIL3Q8ND23 1372 aa16.81■□□□□ 0.28
ITGA3-216ENST00000570989 A0A0G2JLW4 131 aa16.81■□□□□ 0.28
ITGA3-216ENST00000570989 TADA3O75528 432 aa16.81■□□□□ 0.28
ITGA3-216ENST00000570989 FDPSP14324 419 aaKnown RBP16.81■□□□□ 0.28
ITGA3-216ENST00000570989 TNNI3KQ59H18 835 aa16.81■□□□□ 0.28
ITGA3-216ENST00000570989 UBXN6Q9BZV1 441 aa16.81■□□□□ 0.28
ITGA3-216ENST00000570989 FPGT-TNNI3KV9GXZ4 949 aa16.81■□□□□ 0.28
ITGA3-216ENST00000570989 ITGB4P16144 1822 aa16.81■□□□□ 0.28
ITGA3-216ENST00000570989 TUBB4AP04350 444 aa16.8■□□□□ 0.28
ITGA3-216ENST00000570989 LINC00301Q8NCQ3 95 aa16.8■□□□□ 0.28
ITGA3-216ENST00000570989 DNAI1Q9UI46 699 aa16.8■□□□□ 0.28
ITGA3-216ENST00000570989 NUP188Q5SRE5 1749 aa16.8■□□□□ 0.28
ITGA3-216ENST00000570989 RFX5P48382 616 aaPredicted RBP16.8■□□□□ 0.28
ITGA3-216ENST00000570989 TFCP2Q12800 502 aa16.8■□□□□ 0.28
ITGA3-216ENST00000570989 GORABQ5T7V8 394 aa16.8■□□□□ 0.28
ITGA3-216ENST00000570989 PLBD2Q8NHP8 589 aa16.8■□□□□ 0.28
ITGA3-216ENST00000570989 BIN1O00499 593 aa16.79■□□□□ 0.28
ITGA3-216ENST00000570989 HMGB1P09429 215 aaKnown RBP16.79■□□□□ 0.28
ITGA3-216ENST00000570989 PDIA3P30101 505 aaKnown RBP16.79■□□□□ 0.28
ITGA3-216ENST00000570989 DNAJC2Q99543 621 aaKnown RBP16.79■□□□□ 0.28
ITGA3-216ENST00000570989 HAUS7Q99871 368 aa16.79■□□□□ 0.28
ITGA3-216ENST00000570989 COPRSQ9NQ92 184 aa16.79■□□□□ 0.28
ITGA3-216ENST00000570989 CLIC4Q9Y696 253 aa16.79■□□□□ 0.28
ITGA3-216ENST00000570989 SH3TC1Q8TE82 1336 aa16.79■□□□□ 0.28
ITGA3-216ENST00000570989 DDX46Q7L014 1031 aaKnown RBP16.79■□□□□ 0.28
ITGA3-216ENST00000570989 DHX37Q8IY37 1157 aaKnown RBP16.79■□□□□ 0.28
ITGA3-216ENST00000570989 SEC31AO94979 1220 aaKnown RBP16.78■□□□□ 0.28
ITGA3-216ENST00000570989 A1BGP04217 495 aa16.78■□□□□ 0.28
ITGA3-216ENST00000570989 ATP1A3P13637 1013 aa16.78■□□□□ 0.28
ITGA3-216ENST00000570989 NLRP12P59046 1061 aa16.78■□□□□ 0.28
ITGA3-216ENST00000570989 HOMER1Q86YM7 354 aa16.78■□□□□ 0.28
ITGA3-216ENST00000570989 DBNDD2Q9BQY9 259 aa16.78■□□□□ 0.28
ITGA3-216ENST00000570989 QTRT2Q9H974 415 aaKnown RBP16.78■□□□□ 0.28
ITGA3-216ENST00000570989 FANCCQ00597 558 aa16.78■□□□□ 0.28
ITGA3-216ENST00000570989 PTPN12Q05209 780 aaKnown RBP16.78■□□□□ 0.28
ITGA3-216ENST00000570989 TMCO3Q6UWJ1 677 aa16.78■□□□□ 0.28
ITGA3-216ENST00000570989 REXO1L1PQ8IX06 675 aa16.78■□□□□ 0.28
ITGA3-216ENST00000570989 UBXN4Q92575 508 aa16.78■□□□□ 0.28
ITGA3-216ENST00000570989 TMX1Q9H3N1 280 aa16.78■□□□□ 0.28
ITGA3-216ENST00000570989 PARP3Q9Y6F1 533 aa16.78■□□□□ 0.28
ITGA3-216ENST00000570989 ATP5J2-PTCD1G3V325 749 aa16.77■□□□□ 0.28
ITGA3-216ENST00000570989 LMOD1P29536 600 aaPredicted RBP16.77■□□□□ 0.28
ITGA3-216ENST00000570989 OTUD7BQ6GQQ9 843 aa16.77■□□□□ 0.28
ITGA3-216ENST00000570989 ATRNO75882 1429 aa16.77■□□□□ 0.28
ITGA3-216ENST00000570989 SASH3O75995 380 aa16.77■□□□□ 0.27
ITGA3-216ENST00000570989 SLC3A2P08195 630 aaKnown RBP16.77■□□□□ 0.27
ITGA3-216ENST00000570989 TTLL7Q6ZT98 887 aa16.77■□□□□ 0.27
ITGA3-216ENST00000570989 PLCD3Q8N3E9 789 aa16.77■□□□□ 0.27
ITGA3-216ENST00000570989 PIGBQ92521 554 aa16.77■□□□□ 0.27
ITGA3-216ENST00000570989 DPF2Q92785 391 aa16.77■□□□□ 0.27
ITGA3-216ENST00000570989 KAT6BQ8WYB5 2073 aa16.76■□□□□ 0.27
ITGA3-216ENST00000570989 E7EWF7 191 aa16.76■□□□□ 0.27
ITGA3-216ENST00000570989 DHX8Q14562 1220 aaKnown RBP16.76■□□□□ 0.27
ITGA3-216ENST00000570989 ZNF772Q68DY9 489 aaPredicted RBP16.76■□□□□ 0.27
ITGA3-216ENST00000570989 UBE3BQ7Z3V4 1068 aa16.76■□□□□ 0.27
ITGA3-216ENST00000570989 KBTBD3Q8NAB2 608 aa16.76■□□□□ 0.27
ITGA3-216ENST00000570989 NEK11Q8NG66 645 aa16.76■□□□□ 0.27
ITGA3-216ENST00000570989 ZNF274Q96GC6 653 aaPredicted RBP16.76■□□□□ 0.27
ITGA3-216ENST00000570989 CARD6Q9BX69 1037 aa16.76■□□□□ 0.27
ITGA3-216ENST00000570989 ASAP1Q9ULH1 1129 aa16.76■□□□□ 0.27
ITGA3-216ENST00000570989 POLR3GO15318 223 aaPredicted RBP16.76■□□□□ 0.27
ITGA3-216ENST00000570989 TBC1D8O95759 1140 aa16.76■□□□□ 0.27
ITGA3-216ENST00000570989 STK38Q15208 465 aa16.76■□□□□ 0.27
ITGA3-216ENST00000570989 CHST3Q7LGC8 479 aa16.76■□□□□ 0.27
ITGA3-216ENST00000570989 POLR3EQ9NVU0 708 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms