RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 GJB1P08034 283 aa9.36□□□□□ -0.91
SMG6-205ENST00000570659 ELNP15502 786 aa9.36□□□□□ -0.91
SMG6-205ENST00000570659 ITGA6P23229 1130 aa9.36□□□□□ -0.91
SMG6-205ENST00000570659 PSMC4P43686 418 aa9.36□□□□□ -0.91
SMG6-205ENST00000570659 UBE3BQ7Z3V4 1068 aa9.36□□□□□ -0.91
SMG6-205ENST00000570659 ZMYND8Q9ULU4 1186 aaPredicted RBP9.36□□□□□ -0.91
SMG6-205ENST00000570659 LEMD3Q9Y2U8 911 aa9.36□□□□□ -0.91
SMG6-205ENST00000570659 PPP2R3BQ9Y5P8 575 aa9.36□□□□□ -0.91
SMG6-205ENST00000570659 NEURL1BA8MQ27 555 aa9.35□□□□□ -0.91
SMG6-205ENST00000570659 H7C1W4 665 aa9.35□□□□□ -0.91
SMG6-205ENST00000570659 HOXB7P09629 217 aa9.35□□□□□ -0.91
SMG6-205ENST00000570659 IL1R1P14778 569 aa9.35□□□□□ -0.91
SMG6-205ENST00000570659 SYN1P17600 705 aa9.35□□□□□ -0.91
SMG6-205ENST00000570659 INPP5BP32019 993 aa9.35□□□□□ -0.91
SMG6-205ENST00000570659 GRK4P32298 578 aa9.35□□□□□ -0.91
SMG6-205ENST00000570659 BCAMP50895 628 aa9.35□□□□□ -0.91
SMG6-205ENST00000570659 MAP3K9P80192 1104 aa9.35□□□□□ -0.91
SMG6-205ENST00000570659 GOLGA2Q08379 1002 aa9.35□□□□□ -0.91
SMG6-205ENST00000570659 SUPT20HL1Q3ZLR7 823 aa9.35□□□□□ -0.91
SMG6-205ENST00000570659 EPHA10Q5JZY3 1008 aa9.35□□□□□ -0.91
SMG6-205ENST00000570659 ZNF594Q96JF6 807 aaPredicted RBP9.35□□□□□ -0.91
SMG6-205ENST00000570659 GUCD1Q96NT3 240 aa9.35□□□□□ -0.91
SMG6-205ENST00000570659 CDC5LQ99459 802 aaKnown RBP9.35□□□□□ -0.91
SMG6-205ENST00000570659 RNF208Q9H0X6 261 aa9.35□□□□□ -0.91
SMG6-205ENST00000570659 PI4KAP2A4QPH2 592 aa9.34□□□□□ -0.91
SMG6-205ENST00000570659 NEFMP07197 916 aa9.34□□□□□ -0.91
SMG6-205ENST00000570659 CYP2C8P10632 490 aa9.34□□□□□ -0.91
SMG6-205ENST00000570659 GTF2A2P52657 109 aa9.34□□□□□ -0.91
SMG6-205ENST00000570659 OTUD7BQ6GQQ9 843 aa9.34□□□□□ -0.91
SMG6-205ENST00000570659 GPAT2Q6NUI2 795 aa9.34□□□□□ -0.91
SMG6-205ENST00000570659 PI4KAP1Q8N8J0 262 aa9.34□□□□□ -0.91
SMG6-205ENST00000570659 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.34□□□□□ -0.91
SMG6-205ENST00000570659 CCER1Q8TC90 406 aaPredicted RBP9.34□□□□□ -0.91
SMG6-205ENST00000570659 DDX60LQ5H9U9 1706 aaKnown RBP9.34□□□□□ -0.92
SMG6-205ENST00000570659 MYPNQ86TC9 1320 aa9.33□□□□□ -0.92
SMG6-205ENST00000570659 UNCXA6NJT0 531 aa9.33□□□□□ -0.92
SMG6-205ENST00000570659 CSF1RP07333 972 aa9.33□□□□□ -0.92
SMG6-205ENST00000570659 RBM5P52756 815 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMG6-205ENST00000570659 TRIM32Q13049 653 aa9.33□□□□□ -0.92
SMG6-205ENST00000570659 DZIP1LQ8IYY4 767 aaKnown RBP9.33□□□□□ -0.92
SMG6-205ENST00000570659 PAWRQ96IZ0 340 aaKnown RBP9.33□□□□□ -0.92
SMG6-205ENST00000570659 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.33□□□□□ -0.92
SMG6-205ENST00000570659 STXBP5LQ9Y2K9 1186 aa9.33□□□□□ -0.92
SMG6-205ENST00000570659 SGPL1O95470 568 aa9.32□□□□□ -0.92
SMG6-205ENST00000570659 BCRP11274 1271 aa9.32□□□□□ -0.92
SMG6-205ENST00000570659 MAGEA10P43363 369 aaPredicted RBP9.32□□□□□ -0.92
SMG6-205ENST00000570659 GYG1P46976 350 aa9.32□□□□□ -0.92
SMG6-205ENST00000570659 FOXO4P98177 505 aa9.32□□□□□ -0.92
SMG6-205ENST00000570659 C15orf52Q6ZUT6 534 aaKnown RBP9.32□□□□□ -0.92
SMG6-205ENST00000570659 MIGA2Q7L4E1 593 aa9.32□□□□□ -0.92
SMG6-205ENST00000570659 C7orf61Q8IZ16 206 aa9.32□□□□□ -0.92
SMG6-205ENST00000570659 DEFB118Q96PH6 123 aa9.32□□□□□ -0.92
SMG6-205ENST00000570659 WRNIP1Q96S55 665 aa9.32□□□□□ -0.92
SMG6-205ENST00000570659 TTF2Q9UNY4 1162 aaKnown RBP9.32□□□□□ -0.92
SMG6-205ENST00000570659 IQSEC3Q9UPP2 1182 aaPredicted RBP9.32□□□□□ -0.92
SMG6-205ENST00000570659 PLXNB2O15031 1838 aa9.32□□□□□ -0.92
SMG6-205ENST00000570659 CDH23Q9H251 3354 aa9.32□□□□□ -0.92
SMG6-205ENST00000570659 MUC3AQ02505 3323 aa9.31□□□□□ -0.92
SMG6-205ENST00000570659 PTPRFP10586 1907 aa9.31□□□□□ -0.92
SMG6-205ENST00000570659 A0A1W2PPC1 479 aa9.31□□□□□ -0.92
SMG6-205ENST00000570659 PDHXO00330 501 aa9.31□□□□□ -0.92
SMG6-205ENST00000570659 EVI5O60447 810 aa9.31□□□□□ -0.92
SMG6-205ENST00000570659 FMNL1O95466 1100 aaPredicted RBP9.31□□□□□ -0.92
SMG6-205ENST00000570659 INHAP05111 366 aa9.31□□□□□ -0.92
SMG6-205ENST00000570659 CRKP46108 304 aa9.31□□□□□ -0.92
SMG6-205ENST00000570659 KSR2Q6VAB6 950 aa9.31□□□□□ -0.92
SMG6-205ENST00000570659 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.31□□□□□ -0.92
SMG6-205ENST00000570659 RAET1EQ8TD07 263 aa9.31□□□□□ -0.92
SMG6-205ENST00000570659 FAM161BQ96MY7 647 aa9.31□□□□□ -0.92
SMG6-205ENST00000570659 HTATIP2Q9BUP3 242 aa9.31□□□□□ -0.92
SMG6-205ENST00000570659 PLA2G12BQ9BX93 195 aa9.31□□□□□ -0.92
SMG6-205ENST00000570659 PUS3Q9BZE2 481 aaKnown RBP9.31□□□□□ -0.92
SMG6-205ENST00000570659 CRISPLD2Q9H0B8 497 aa9.31□□□□□ -0.92
SMG6-205ENST00000570659 PHIPQ8WWQ0 1821 aa9.31□□□□□ -0.92
SMG6-205ENST00000570659 FAM205AQ6ZU69 1335 aa9.31□□□□□ -0.92
SMG6-205ENST00000570659 COL2A1P02458 1487 aaPredicted RBP9.3□□□□□ -0.92
SMG6-205ENST00000570659 PLIN1O60240 522 aa9.3□□□□□ -0.92
SMG6-205ENST00000570659 PEX10O60683 326 aa9.3□□□□□ -0.92
SMG6-205ENST00000570659 CETPP11597 493 aa9.3□□□□□ -0.92
SMG6-205ENST00000570659 IGHMBP2P38935 993 aaKnown RBP9.3□□□□□ -0.92
SMG6-205ENST00000570659 FLT3LGP49771 235 aa9.3□□□□□ -0.92
SMG6-205ENST00000570659 PPIL2Q13356 520 aa9.3□□□□□ -0.92
SMG6-205ENST00000570659 GCKRQ14397 625 aa9.3□□□□□ -0.92
SMG6-205ENST00000570659 MFSD14BQ5SR56 506 aa9.3□□□□□ -0.92
SMG6-205ENST00000570659 CCDC84Q86UT8 332 aaPredicted RBP9.3□□□□□ -0.92
SMG6-205ENST00000570659 ERO1BQ86YB8 467 aa9.3□□□□□ -0.92
SMG6-205ENST00000570659 ZFPM1Q8IX07 1006 aa9.3□□□□□ -0.92
SMG6-205ENST00000570659 TDRD7Q8NHU6 1098 aaKnown RBP9.3□□□□□ -0.92
SMG6-205ENST00000570659 ANKRD2Q9GZV1 360 aa9.3□□□□□ -0.92
SMG6-205ENST00000570659 PAK6Q9NQU5 681 aaPredicted RBP9.3□□□□□ -0.92
SMG6-205ENST00000570659 ADAMTS8Q9UP79 889 aa9.3□□□□□ -0.92
SMG6-205ENST00000570659 NR2E3Q9Y5X4 410 aa9.3□□□□□ -0.92
SMG6-205ENST00000570659 TTC28Q96AY4 2481 aa9.3□□□□□ -0.92
SMG6-205ENST00000570659 ADCY3O60266 1144 aa9.29□□□□□ -0.92
SMG6-205ENST00000570659 BMP8BP34820 402 aa9.29□□□□□ -0.92
SMG6-205ENST00000570659 KCNJ4P48050 445 aa9.29□□□□□ -0.92
SMG6-205ENST00000570659 FKBP1AP62942 108 aaKnown RBP9.29□□□□□ -0.92
SMG6-205ENST00000570659 LMOD3Q0VAK6 560 aa9.29□□□□□ -0.92
SMG6-205ENST00000570659 SNAPC2Q13487 334 aa9.29□□□□□ -0.92
SMG6-205ENST00000570659 APOBEC3HQ6NTF7 200 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms