RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 C2orf69Q8N8R5 385 aa8.34□□□□□ -1.07
SMG6-204ENST00000570606 PROCA1Q8NCQ7 364 aaPredicted RBP8.34□□□□□ -1.07
SMG6-204ENST00000570606 JARID2Q92833 1246 aaPredicted RBP8.34□□□□□ -1.07
SMG6-204ENST00000570606 METTL22Q9BUU2 404 aaPredicted RBP8.34□□□□□ -1.07
SMG6-204ENST00000570606 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.34□□□□□ -1.07
SMG6-204ENST00000570606 STK31Q9BXU1 1019 aa8.34□□□□□ -1.07
SMG6-204ENST00000570606 TMEM134Q9H6X4 195 aa8.34□□□□□ -1.07
SMG6-204ENST00000570606 GBA2Q9HCG7 927 aaPredicted RBP8.34□□□□□ -1.07
SMG6-204ENST00000570606 KCNQ5Q9NR82 932 aa8.34□□□□□ -1.07
SMG6-204ENST00000570606 PODXL2Q9NZ53 605 aa8.34□□□□□ -1.07
SMG6-204ENST00000570606 PAPPA2Q9BXP8 1791 aa8.34□□□□□ -1.07
SMG6-204ENST00000570606 ZNF609O15014 1411 aa8.33□□□□□ -1.08
SMG6-204ENST00000570606 VIL1P09327 827 aaKnown RBP8.33□□□□□ -1.08
SMG6-204ENST00000570606 CTSWP56202 376 aa8.33□□□□□ -1.08
SMG6-204ENST00000570606 NEXNQ0ZGT2 675 aa8.33□□□□□ -1.08
SMG6-204ENST00000570606 RGMBQ6NW40 437 aa8.33□□□□□ -1.08
SMG6-204ENST00000570606 DLK2Q6UY11 383 aa8.33□□□□□ -1.08
SMG6-204ENST00000570606 C8orf58Q8NAV2 365 aa8.33□□□□□ -1.08
SMG6-204ENST00000570606 CDC5LQ99459 802 aaKnown RBP8.33□□□□□ -1.08
SMG6-204ENST00000570606 ZBED2Q9BTP6 218 aa8.33□□□□□ -1.08
SMG6-204ENST00000570606 TBC1D2Q9BYX2 928 aa8.33□□□□□ -1.08
SMG6-204ENST00000570606 POLR3EQ9NVU0 708 aa8.33□□□□□ -1.08
SMG6-204ENST00000570606 MAP3K2Q9Y2U5 619 aa8.33□□□□□ -1.08
SMG6-204ENST00000570606 ZNF646O15015 1829 aaPredicted RBP8.33□□□□□ -1.08
SMG6-204ENST00000570606 SMAPO00193 183 aa8.32□□□□□ -1.08
SMG6-204ENST00000570606 CLK2P49760 499 aaKnown RBP8.32□□□□□ -1.08
SMG6-204ENST00000570606 ZNF157P51786 506 aaPredicted RBP8.32□□□□□ -1.08
SMG6-204ENST00000570606 DIXDC1Q155Q3 683 aa8.32□□□□□ -1.08
SMG6-204ENST00000570606 RSBN1LQ6PCB5 846 aaPredicted RBP8.32□□□□□ -1.08
SMG6-204ENST00000570606 POTEEQ6S8J3 1075 aa8.32□□□□□ -1.08
SMG6-204ENST00000570606 AGBL3Q8NEM8 1001 aa8.32□□□□□ -1.08
SMG6-204ENST00000570606 TSR2Q969E8 191 aaKnown RBP8.32□□□□□ -1.08
SMG6-204ENST00000570606 CDCA5Q96FF9 252 aa8.32□□□□□ -1.08
SMG6-204ENST00000570606 MCOLN1Q9GZU1 580 aa8.32□□□□□ -1.08
SMG6-204ENST00000570606 MED23Q9ULK4 1368 aa8.32□□□□□ -1.08
SMG6-204ENST00000570606 ASTN2O75129 1339 aaPredicted RBP8.31□□□□□ -1.08
SMG6-204ENST00000570606 A0A1B0GUL6 1792 aa8.31□□□□□ -1.08
SMG6-204ENST00000570606 PI4KAP2A4QPH2 592 aa8.31□□□□□ -1.08
SMG6-204ENST00000570606 ATP2B4P23634 1241 aa8.31□□□□□ -1.08
SMG6-204ENST00000570606 PSEN2P49810 448 aa8.31□□□□□ -1.08
SMG6-204ENST00000570606 DGKZQ13574 1117 aa8.31□□□□□ -1.08
SMG6-204ENST00000570606 ANGEL2Q5VTE6 544 aaKnown RBP8.31□□□□□ -1.08
SMG6-204ENST00000570606 KSR2Q6VAB6 950 aa8.31□□□□□ -1.08
SMG6-204ENST00000570606 TSPYL6Q8N831 410 aa8.31□□□□□ -1.08
SMG6-204ENST00000570606 PI4KAP1Q8N8J0 262 aa8.31□□□□□ -1.08
SMG6-204ENST00000570606 SPIRE2Q8WWL2 714 aa8.31□□□□□ -1.08
SMG6-204ENST00000570606 ZIC5Q96T25 663 aa8.31□□□□□ -1.08
SMG6-204ENST00000570606 USP17L3A6NCW0 530 aa8.3□□□□□ -1.08
SMG6-204ENST00000570606 USP17L4A6NCW7 530 aa8.3□□□□□ -1.08
SMG6-204ENST00000570606 IGKV5-2P06315 115 aa8.3□□□□□ -1.08
SMG6-204ENST00000570606 SLC10A3P09131 477 aa8.3□□□□□ -1.08
SMG6-204ENST00000570606 USP17L8P0C7I0 530 aa8.3□□□□□ -1.08
SMG6-204ENST00000570606 IGHMBP2P38935 993 aaKnown RBP8.3□□□□□ -1.08
SMG6-204ENST00000570606 ZNF280AP59817 542 aaPredicted RBP8.3□□□□□ -1.08
SMG6-204ENST00000570606 SCARF1Q14162 830 aa8.3□□□□□ -1.08
SMG6-204ENST00000570606 CWF19L2Q2TBE0 894 aaKnown RBP8.3□□□□□ -1.08
SMG6-204ENST00000570606 TWISTNBQ3B726 338 aaPredicted RBP8.3□□□□□ -1.08
SMG6-204ENST00000570606 LHX8Q68G74 356 aa8.3□□□□□ -1.08
SMG6-204ENST00000570606 USP17L1Q7RTZ2 530 aa8.3□□□□□ -1.08
SMG6-204ENST00000570606 UBE3BQ7Z3V4 1068 aa8.3□□□□□ -1.08
SMG6-204ENST00000570606 GREM2Q9H772 168 aa8.3□□□□□ -1.08
SMG6-204ENST00000570606 MYOZ2Q9NPC6 264 aa8.3□□□□□ -1.08
SMG6-204ENST00000570606 SAGE1Q9NXZ1 904 aa8.3□□□□□ -1.08
SMG6-204ENST00000570606 PITPNM2Q9BZ72 1349 aa8.29□□□□□ -1.08
SMG6-204ENST00000570606 ECM29Q5VYK3 1845 aa8.29□□□□□ -1.08
SMG6-204ENST00000570606 DDX11L8A8MPP1 907 aa8.29□□□□□ -1.08
SMG6-204ENST00000570606 NEURL1BA8MQ27 555 aa8.29□□□□□ -1.08
SMG6-204ENST00000570606 FAM155AB1AL88 458 aaPredicted RBP8.29□□□□□ -1.08
SMG6-204ENST00000570606 CCT4P50991 539 aaKnown RBP8.29□□□□□ -1.08
SMG6-204ENST00000570606 KIF23Q02241 960 aaPredicted RBP8.29□□□□□ -1.08
SMG6-204ENST00000570606 MLLT1Q03111 559 aaPredicted RBP8.29□□□□□ -1.08
SMG6-204ENST00000570606 MCM6Q14566 821 aa8.29□□□□□ -1.08
SMG6-204ENST00000570606 VARS2Q5ST30 1063 aaKnown RBP8.29□□□□□ -1.08
SMG6-204ENST00000570606 PODNQ7Z5L7 613 aa8.29□□□□□ -1.08
SMG6-204ENST00000570606 RASAL3Q86YV0 1011 aa8.29□□□□□ -1.08
SMG6-204ENST00000570606 TTLL11Q8NHH1 800 aa8.29□□□□□ -1.08
SMG6-204ENST00000570606 BSDC1Q9NW68 430 aaPredicted RBP8.29□□□□□ -1.08
SMG6-204ENST00000570606 KIAA1468Q9P260 1216 aa8.29□□□□□ -1.08
SMG6-204ENST00000570606 LIMD1Q9UGP4 676 aa8.29□□□□□ -1.08
SMG6-204ENST00000570606 MINPP1Q9UNW1 487 aa8.29□□□□□ -1.08
SMG6-204ENST00000570606 MYO3BQ8WXR4 1341 aa8.29□□□□□ -1.08
SMG6-204ENST00000570606 ARHGAP33O14559 1287 aa8.28□□□□□ -1.08
SMG6-204ENST00000570606 TRPA1O75762 1119 aa8.28□□□□□ -1.08
SMG6-204ENST00000570606 NF2P35240 595 aa8.28□□□□□ -1.08
SMG6-204ENST00000570606 KCNJ4P48050 445 aa8.28□□□□□ -1.08
SMG6-204ENST00000570606 FKBP1BP68106 108 aa8.28□□□□□ -1.08
SMG6-204ENST00000570606 FKBP5Q13451 457 aaPredicted RBP8.28□□□□□ -1.08
SMG6-204ENST00000570606 G2E3Q7L622 706 aa8.28□□□□□ -1.08
SMG6-204ENST00000570606 OGFOD1Q8N543 542 aa8.28□□□□□ -1.08
SMG6-204ENST00000570606 GMLQ99445 158 aa8.28□□□□□ -1.08
SMG6-204ENST00000570606 MPHOSPH8Q99549 860 aa8.28□□□□□ -1.08
SMG6-204ENST00000570606 SLC4A5Q9BY07 1137 aa8.28□□□□□ -1.08
SMG6-204ENST00000570606 MYH16Q9H6N6 1097 aa8.28□□□□□ -1.08
SMG6-204ENST00000570606 SCAF8Q9UPN6 1271 aaKnown RBP8.28□□□□□ -1.08
SMG6-204ENST00000570606 ST18O60284 1047 aa8.27□□□□□ -1.09
SMG6-204ENST00000570606 SASH1O94885 1247 aa8.27□□□□□ -1.09
SMG6-204ENST00000570606 ITGA6P23229 1130 aa8.27□□□□□ -1.09
SMG6-204ENST00000570606 CCDC27Q2M243 656 aa8.27□□□□□ -1.09
SMG6-204ENST00000570606 TUSC1Q2TAM9 212 aa8.27□□□□□ -1.09
SMG6-204ENST00000570606 DACT2Q5SW24 774 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms