RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 ZBTB48P10074 688 aaPredicted RBP10.82□□□□□ -0.68
CTDNEP1-203ENST00000570385 INHBEP58166 350 aa10.82□□□□□ -0.68
CTDNEP1-203ENST00000570385 RABL6Q3YEC7 729 aaPredicted RBP10.82□□□□□ -0.68
CTDNEP1-203ENST00000570385 CAVIN4Q5BKX8 364 aa10.82□□□□□ -0.68
CTDNEP1-203ENST00000570385 FBXO46Q6PJ61 603 aaPredicted RBP10.82□□□□□ -0.68
CTDNEP1-203ENST00000570385 ANKRD13AQ8IZ07 590 aa10.82□□□□□ -0.68
CTDNEP1-203ENST00000570385 OPTNQ96CV9 577 aa10.82□□□□□ -0.68
CTDNEP1-203ENST00000570385 CDCA7LQ96GN5 454 aa10.82□□□□□ -0.68
CTDNEP1-203ENST00000570385 TEPSINQ96N21 525 aa10.82□□□□□ -0.68
CTDNEP1-203ENST00000570385 USP44Q9H0E7 712 aa10.82□□□□□ -0.68
CTDNEP1-203ENST00000570385 TRIM17Q9Y577 477 aa10.82□□□□□ -0.68
CTDNEP1-203ENST00000570385 PDE8BO95263 885 aa10.81□□□□□ -0.68
CTDNEP1-203ENST00000570385 SLC34A2O95436 690 aa10.81□□□□□ -0.68
CTDNEP1-203ENST00000570385 CRHR2Q13324 411 aa10.81□□□□□ -0.68
CTDNEP1-203ENST00000570385 TNFAIP1Q13829 316 aa10.81□□□□□ -0.68
CTDNEP1-203ENST00000570385 NOM1Q5C9Z4 860 aaKnown RBP10.81□□□□□ -0.68
CTDNEP1-203ENST00000570385 VGLL2Q8N8G2 317 aa10.81□□□□□ -0.68
CTDNEP1-203ENST00000570385 PTPN18Q99952 460 aa10.81□□□□□ -0.68
CTDNEP1-203ENST00000570385 CFHR5Q9BXR6 569 aa10.81□□□□□ -0.68
CTDNEP1-203ENST00000570385 PTPRCP08575 1304 aa10.81□□□□□ -0.68
CTDNEP1-203ENST00000570385 E9PSI1 815 aa10.8□□□□□ -0.68
CTDNEP1-203ENST00000570385 SLFN5Q08AF3 891 aa10.8□□□□□ -0.68
CTDNEP1-203ENST00000570385 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.8□□□□□ -0.68
CTDNEP1-203ENST00000570385 OTOP1Q7RTM1 612 aa10.8□□□□□ -0.68
CTDNEP1-203ENST00000570385 CD99L2Q8TCZ2 262 aa10.8□□□□□ -0.68
CTDNEP1-203ENST00000570385 TNNI2P48788 182 aa10.79□□□□□ -0.68
CTDNEP1-203ENST00000570385 MAP3K9P80192 1104 aa10.79□□□□□ -0.68
CTDNEP1-203ENST00000570385 CAP1Q01518 475 aa10.79□□□□□ -0.68
CTDNEP1-203ENST00000570385 VGLL4Q14135 290 aa10.79□□□□□ -0.68
CTDNEP1-203ENST00000570385 OTUD7BQ6GQQ9 843 aa10.79□□□□□ -0.68
CTDNEP1-203ENST00000570385 TBC1D22AQ8WUA7 517 aa10.79□□□□□ -0.68
CTDNEP1-203ENST00000570385 BRI3BPQ8WY22 251 aa10.79□□□□□ -0.68
CTDNEP1-203ENST00000570385 TEKT1Q969V4 418 aa10.79□□□□□ -0.68
CTDNEP1-203ENST00000570385 OTUD5Q96G74 571 aa10.79□□□□□ -0.68
CTDNEP1-203ENST00000570385 SIL1Q9H173 461 aa10.79□□□□□ -0.68
CTDNEP1-203ENST00000570385 SMC4Q9NTJ3 1288 aa10.79□□□□□ -0.68
CTDNEP1-203ENST00000570385 OTOFQ9HC10 1997 aa10.78□□□□□ -0.68
CTDNEP1-203ENST00000570385 CCL15-CCL14A0A0B4J2E2 113 aa10.78□□□□□ -0.68
CTDNEP1-203ENST00000570385 UNCXA6NJT0 531 aa10.78□□□□□ -0.68
CTDNEP1-203ENST00000570385 EYA2O00167 538 aa10.78□□□□□ -0.68
CTDNEP1-203ENST00000570385 ECM2O94769 699 aaPredicted RBP10.78□□□□□ -0.68
CTDNEP1-203ENST00000570385 IFIT1P09914 478 aaKnown RBP10.78□□□□□ -0.68
CTDNEP1-203ENST00000570385 FGFR2P21802 821 aa10.78□□□□□ -0.68
CTDNEP1-203ENST00000570385 RFX5P48382 616 aaPredicted RBP10.78□□□□□ -0.68
CTDNEP1-203ENST00000570385 PUM3Q15397 648 aaKnown RBP10.78□□□□□ -0.68
CTDNEP1-203ENST00000570385 CCL15Q16663 113 aa10.78□□□□□ -0.68
CTDNEP1-203ENST00000570385 APOBEC3HQ6NTF7 200 aaKnown RBP10.78□□□□□ -0.68
CTDNEP1-203ENST00000570385 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.78□□□□□ -0.68
CTDNEP1-203ENST00000570385 MS4A4AQ96JQ5 239 aa10.78□□□□□ -0.68
CTDNEP1-203ENST00000570385 TMOD2Q9NZR1 351 aa10.78□□□□□ -0.68
CTDNEP1-203ENST00000570385 CSADQ9Y600 493 aa10.78□□□□□ -0.68
CTDNEP1-203ENST00000570385 TESPA1A2RU30 521 aaPredicted RBP10.77□□□□□ -0.69
CTDNEP1-203ENST00000570385 POTEFA5A3E0 1075 aa10.77□□□□□ -0.69
CTDNEP1-203ENST00000570385 SLC5A1P13866 664 aa10.77□□□□□ -0.69
CTDNEP1-203ENST00000570385 HDLBPQ00341 1268 aaKnown RBP10.77□□□□□ -0.69
CTDNEP1-203ENST00000570385 SP3Q02447 781 aa10.77□□□□□ -0.69
CTDNEP1-203ENST00000570385 TAF1CQ15572 869 aaPredicted RBP10.77□□□□□ -0.69
CTDNEP1-203ENST00000570385 MIGA2Q7L4E1 593 aa10.77□□□□□ -0.69
CTDNEP1-203ENST00000570385 FAM43AQ8N2R8 423 aa10.77□□□□□ -0.69
CTDNEP1-203ENST00000570385 ZKSCAN4Q969J2 545 aaPredicted RBP10.77□□□□□ -0.69
CTDNEP1-203ENST00000570385 ERO1AQ96HE7 468 aa10.77□□□□□ -0.69
CTDNEP1-203ENST00000570385 ZDHHC15Q96MV8 337 aa10.77□□□□□ -0.69
CTDNEP1-203ENST00000570385 WRNIP1Q96S55 665 aa10.77□□□□□ -0.69
CTDNEP1-203ENST00000570385 EFCC1Q9HA90 598 aa10.77□□□□□ -0.69
CTDNEP1-203ENST00000570385 NOB1Q9ULX3 412 aaKnown RBP10.77□□□□□ -0.69
CTDNEP1-203ENST00000570385 TNRC18O15417 2968 aaPredicted RBP10.77□□□□□ -0.69
CTDNEP1-203ENST00000570385 ARAP2Q8WZ64 1704 aa10.76□□□□□ -0.69
CTDNEP1-203ENST00000570385 MYCP01106 439 aaPredicted RBP10.76□□□□□ -0.69
CTDNEP1-203ENST00000570385 UBTFL1P0CB47 393 aaPredicted RBP10.76□□□□□ -0.69
CTDNEP1-203ENST00000570385 GTF2A2P52657 109 aa10.76□□□□□ -0.69
CTDNEP1-203ENST00000570385 TCP10Q12799 353 aa10.76□□□□□ -0.69
CTDNEP1-203ENST00000570385 DIXDC1Q155Q3 683 aa10.76□□□□□ -0.69
CTDNEP1-203ENST00000570385 ATG9AQ7Z3C6 839 aa10.76□□□□□ -0.69
CTDNEP1-203ENST00000570385 LPIN2Q92539 896 aa10.76□□□□□ -0.69
CTDNEP1-203ENST00000570385 PA2G4Q9UQ80 394 aaKnown RBP10.76□□□□□ -0.69
CTDNEP1-203ENST00000570385 PTPN22Q9Y2R2 807 aa10.76□□□□□ -0.69
CTDNEP1-203ENST00000570385 PRDX5P30044 214 aa10.75□□□□□ -0.69
CTDNEP1-203ENST00000570385 ATP2B3Q16720 1220 aa10.75□□□□□ -0.69
CTDNEP1-203ENST00000570385 ALDH1L2Q3SY69 923 aa10.75□□□□□ -0.69
CTDNEP1-203ENST00000570385 PRPF38BQ5VTL8 546 aaKnown RBP10.75□□□□□ -0.69
CTDNEP1-203ENST00000570385 WDR66Q8TBY9 1149 aa10.75□□□□□ -0.69
CTDNEP1-203ENST00000570385 ZFYVE28Q9HCC9 887 aa10.75□□□□□ -0.69
CTDNEP1-203ENST00000570385 LRRFIP2Q9Y608 721 aaKnown RBP10.75□□□□□ -0.69
CTDNEP1-203ENST00000570385 SNCAIPQ9Y6H5 919 aa10.75□□□□□ -0.69
CTDNEP1-203ENST00000570385 SPDYE5A6NIY4 337 aa10.74□□□□□ -0.69
CTDNEP1-203ENST00000570385 IRF6O14896 467 aa10.74□□□□□ -0.69
CTDNEP1-203ENST00000570385 ADORA1P30542 326 aa10.74□□□□□ -0.69
CTDNEP1-203ENST00000570385 INPP5BP32019 993 aa10.74□□□□□ -0.69
CTDNEP1-203ENST00000570385 PHKA1P46020 1223 aa10.74□□□□□ -0.69
CTDNEP1-203ENST00000570385 NFIAQ12857 509 aa10.74□□□□□ -0.69
CTDNEP1-203ENST00000570385 CDC42EP5Q6NZY7 148 aa10.74□□□□□ -0.69
CTDNEP1-203ENST00000570385 HHIPL2Q6UWX4 724 aa10.74□□□□□ -0.69
CTDNEP1-203ENST00000570385 FAM83AQ86UY5 434 aa10.74□□□□□ -0.69
CTDNEP1-203ENST00000570385 ERO1BQ86YB8 467 aa10.74□□□□□ -0.69
CTDNEP1-203ENST00000570385 CEP126Q9P2H0 1117 aa10.74□□□□□ -0.69
CTDNEP1-203ENST00000570385 SUGT1Q9Y2Z0 365 aa10.74□□□□□ -0.69
CTDNEP1-203ENST00000570385 DAGLAQ9Y4D2 1042 aa10.74□□□□□ -0.69
CTDNEP1-203ENST00000570385 MAST3O60307 1309 aa10.74□□□□□ -0.69
CTDNEP1-203ENST00000570385 AK9Q5TCS8 1911 aa10.74□□□□□ -0.69
CTDNEP1-203ENST00000570385 BTBD19C9JJ37 291 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms