RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 TAF6LQ9Y6J9 622 aa13.55□□□□□ -0.24
PDXDC1-217ENST00000570001 TRAPPC3LQ5T215 181 aa13.54□□□□□ -0.24
PDXDC1-217ENST00000570001 CRNKL1Q9BZJ0 848 aaKnown RBP13.54□□□□□ -0.24
PDXDC1-217ENST00000570001 PATL2C9JE40 543 aaKnown RBP13.54□□□□□ -0.24
PDXDC1-217ENST00000570001 EIF5P55010 431 aaKnown RBP13.54□□□□□ -0.24
PDXDC1-217ENST00000570001 RTN1Q16799 776 aa13.54□□□□□ -0.24
PDXDC1-217ENST00000570001 CATIPQ7Z7H3 387 aa13.54□□□□□ -0.24
PDXDC1-217ENST00000570001 TTC6Q86TZ1 520 aa13.54□□□□□ -0.24
PDXDC1-217ENST00000570001 WWC3Q9ULE0 1092 aa13.54□□□□□ -0.24
PDXDC1-217ENST00000570001 RGPD5Q99666 1765 aa13.54□□□□□ -0.24
PDXDC1-217ENST00000570001 USP54Q70EL1 1684 aa13.54□□□□□ -0.24
PDXDC1-217ENST00000570001 KCNQ2O43526 872 aa13.54□□□□□ -0.24
PDXDC1-217ENST00000570001 SPTY2D1Q68D10 685 aaPredicted RBP13.54□□□□□ -0.24
PDXDC1-217ENST00000570001 MARCH10Q8NA82 808 aaPredicted RBP13.54□□□□□ -0.24
PDXDC1-217ENST00000570001 KCNB2Q92953 911 aa13.54□□□□□ -0.24
PDXDC1-217ENST00000570001 PIH1D3Q9NQM4 214 aaKnown RBP13.54□□□□□ -0.24
PDXDC1-217ENST00000570001 ZNF165P49910 485 aa13.53□□□□□ -0.24
PDXDC1-217ENST00000570001 CTDSPL2Q05D32 466 aa13.53□□□□□ -0.24
PDXDC1-217ENST00000570001 KCNG4Q8TDN1 519 aa13.53□□□□□ -0.24
PDXDC1-217ENST00000570001 ABCC6O95255 1503 aa13.53□□□□□ -0.24
PDXDC1-217ENST00000570001 TRPM3Q9HCF6 1732 aaPredicted RBP13.53□□□□□ -0.24
PDXDC1-217ENST00000570001 GYG1P46976 350 aa13.53□□□□□ -0.24
PDXDC1-217ENST00000570001 ATL3Q6DD88 541 aa13.53□□□□□ -0.24
PDXDC1-217ENST00000570001 OTUD7BQ6GQQ9 843 aa13.53□□□□□ -0.24
PDXDC1-217ENST00000570001 OLFM4Q6UX06 510 aa13.53□□□□□ -0.24
PDXDC1-217ENST00000570001 ZKSCAN3Q9BRR0 538 aa13.53□□□□□ -0.24
PDXDC1-217ENST00000570001 ALDH8A1Q9H2A2 487 aaPredicted RBP13.53□□□□□ -0.24
PDXDC1-217ENST00000570001 R3HCC1Q9Y3T6 440 aaKnown RBP13.53□□□□□ -0.24
PDXDC1-217ENST00000570001 AK9Q5TCS8 1911 aa13.53□□□□□ -0.24
PDXDC1-217ENST00000570001 RPAP1Q9BWH6 1393 aaPredicted RBP13.53□□□□□ -0.24
PDXDC1-217ENST00000570001 FAM200AQ8TCP9 573 aa13.53□□□□□ -0.24
PDXDC1-217ENST00000570001 ANO10Q9NW15 660 aa13.53□□□□□ -0.24
PDXDC1-217ENST00000570001 SNAP23O00161 211 aa13.53□□□□□ -0.24
PDXDC1-217ENST00000570001 CLCN1P35523 988 aa13.53□□□□□ -0.24
PDXDC1-217ENST00000570001 TYRO3Q06418 890 aa13.53□□□□□ -0.24
PDXDC1-217ENST00000570001 ZNF34Q8IZ26 560 aa13.53□□□□□ -0.24
PDXDC1-217ENST00000570001 NSUN7Q8NE18 718 aaKnown RBP13.53□□□□□ -0.24
PDXDC1-217ENST00000570001 CTCFLQ8NI51 663 aaPredicted RBP13.53□□□□□ -0.24
PDXDC1-217ENST00000570001 RPS8P62241 208 aaKnown RBP13.52□□□□□ -0.24
PDXDC1-217ENST00000570001 ERFEQ4G0M1 354 aa13.52□□□□□ -0.24
PDXDC1-217ENST00000570001 IFNL3Q8IZI9 196 aa13.52□□□□□ -0.24
PDXDC1-217ENST00000570001 FAM13BQ9NYF5 915 aa13.52□□□□□ -0.24
PDXDC1-217ENST00000570001 ANO6Q4KMQ2 910 aa13.52□□□□□ -0.24
PDXDC1-217ENST00000570001 BRAPQ7Z569 592 aa13.52□□□□□ -0.24
PDXDC1-217ENST00000570001 PIBF1Q8WXW3 757 aa13.52□□□□□ -0.24
PDXDC1-217ENST00000570001 MRPS27Q92552 414 aaKnown RBP13.52□□□□□ -0.24
PDXDC1-217ENST00000570001 HIBADHP31937 336 aaKnown RBP13.52□□□□□ -0.25
PDXDC1-217ENST00000570001 RASGRF1Q13972 1273 aa13.52□□□□□ -0.25
PDXDC1-217ENST00000570001 FAM182BQ5T319 152 aa13.52□□□□□ -0.25
PDXDC1-217ENST00000570001 TMEM87AQ8NBN3 555 aa13.52□□□□□ -0.25
PDXDC1-217ENST00000570001 MKNK2Q9HBH9 465 aa13.52□□□□□ -0.25
PDXDC1-217ENST00000570001 RRAGDQ9NQL2 400 aaPredicted RBP13.52□□□□□ -0.25
PDXDC1-217ENST00000570001 ST5P78524 1137 aa13.52□□□□□ -0.25
PDXDC1-217ENST00000570001 JAG2Q9Y219 1238 aa13.52□□□□□ -0.25
PDXDC1-217ENST00000570001 BCL9O00512 1426 aa13.51□□□□□ -0.25
PDXDC1-217ENST00000570001 SLC4A8Q2Y0W8 1093 aa13.51□□□□□ -0.25
PDXDC1-217ENST00000570001 CLEC4GQ6UXB4 293 aa13.51□□□□□ -0.25
PDXDC1-217ENST00000570001 STOX1Q6ZVD7 989 aa13.51□□□□□ -0.25
PDXDC1-217ENST00000570001 SPTLC2O15270 562 aa13.51□□□□□ -0.25
PDXDC1-217ENST00000570001 PDE4BQ07343 736 aa13.51□□□□□ -0.25
PDXDC1-217ENST00000570001 CNBD1Q8NA66 436 aa13.51□□□□□ -0.25
PDXDC1-217ENST00000570001 NOL7Q9UMY1 257 aaKnown RBP13.51□□□□□ -0.25
PDXDC1-217ENST00000570001 ABCC12Q96J65 1359 aa13.51□□□□□ -0.25
PDXDC1-217ENST00000570001 ALS2Q96Q42 1657 aa13.51□□□□□ -0.25
PDXDC1-217ENST00000570001 TSPY2A6NKD2 308 aa13.51□□□□□ -0.25
PDXDC1-217ENST00000570001 STX1AQ16623 288 aa13.51□□□□□ -0.25
PDXDC1-217ENST00000570001 AKNAD1Q5T1N1 836 aa13.51□□□□□ -0.25
PDXDC1-217ENST00000570001 IFIT1BQ5T764 474 aaKnown RBP13.51□□□□□ -0.25
PDXDC1-217ENST00000570001 TFCP2L1Q9NZI6 479 aa13.51□□□□□ -0.25
PDXDC1-217ENST00000570001 MYL10Q9BUA6 226 aa13.51□□□□□ -0.25
PDXDC1-217ENST00000570001 SMC2O95347 1197 aa13.5□□□□□ -0.25
PDXDC1-217ENST00000570001 PHRF1Q9P1Y6 1649 aaKnown RBP13.5□□□□□ -0.25
PDXDC1-217ENST00000570001 CAVIN2O95810 425 aa13.5□□□□□ -0.25
PDXDC1-217ENST00000570001 BAG3O95817 575 aa13.5□□□□□ -0.25
PDXDC1-217ENST00000570001 LIG1P18858 919 aa13.5□□□□□ -0.25
PDXDC1-217ENST00000570001 CDK11BP21127 795 aaKnown RBP13.5□□□□□ -0.25
PDXDC1-217ENST00000570001 HS1BP3Q53T59 392 aa13.5□□□□□ -0.25
PDXDC1-217ENST00000570001 CEP131Q9UPN4 1083 aa13.5□□□□□ -0.25
PDXDC1-217ENST00000570001 SPATA31A5Q5VU36 1347 aa13.5□□□□□ -0.25
PDXDC1-217ENST00000570001 SPATA31A7Q8IWB4 1347 aa13.5□□□□□ -0.25
PDXDC1-217ENST00000570001 C6orf229H3BNL8 230 aa13.5□□□□□ -0.25
PDXDC1-217ENST00000570001 RAD21O60216 631 aa13.5□□□□□ -0.25
PDXDC1-217ENST00000570001 HMGB2P26583 209 aaKnown RBP13.5□□□□□ -0.25
PDXDC1-217ENST00000570001 UBE4AQ14139 1066 aa13.5□□□□□ -0.25
PDXDC1-217ENST00000570001 LDHCP07864 332 aa13.5□□□□□ -0.25
PDXDC1-217ENST00000570001 MARCKSP29966 332 aaPredicted RBP13.5□□□□□ -0.25
PDXDC1-217ENST00000570001 TPD52L1Q16890 204 aaPredicted RBP13.5□□□□□ -0.25
PDXDC1-217ENST00000570001 CREBRFQ8IUR6 639 aa13.5□□□□□ -0.25
PDXDC1-217ENST00000570001 IL17RAQ96F46 866 aa13.5□□□□□ -0.25
PDXDC1-217ENST00000570001 ITPK1Q13572 414 aa13.49□□□□□ -0.25
PDXDC1-217ENST00000570001 PHKBQ93100 1093 aa13.49□□□□□ -0.25
PDXDC1-217ENST00000570001 PPP1R9BQ96SB3 815 aa13.49□□□□□ -0.25
PDXDC1-217ENST00000570001 DNAJC25Q9H1X3 360 aa13.49□□□□□ -0.25
PDXDC1-217ENST00000570001 GPHNQ9NQX3 736 aaPredicted RBP13.49□□□□□ -0.25
PDXDC1-217ENST00000570001 ELP1O95163 1332 aa13.49□□□□□ -0.25
PDXDC1-217ENST00000570001 UBN2Q6ZU65 1347 aa13.49□□□□□ -0.25
PDXDC1-217ENST00000570001 MARF1Q9Y4F3 1742 aaKnown RBP13.49□□□□□ -0.25
PDXDC1-217ENST00000570001 CAMTA2O94983 1202 aa13.49□□□□□ -0.25
PDXDC1-217ENST00000570001 TRIM34Q9BYJ4 488 aa13.49□□□□□ -0.25
PDXDC1-217ENST00000570001 CLSTN2Q9H4D0 955 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms