RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 TBC1D9BQ66K14 1250 aa7.11□□□□□ -1.27
CYLD-216ENST00000569891 TBC1D22AQ8WUA7 517 aa7.11□□□□□ -1.27
CYLD-216ENST00000569891 EYA3Q99504 573 aa7.11□□□□□ -1.27
CYLD-216ENST00000569891 APBA3O96018 575 aa7.11□□□□□ -1.27
CYLD-216ENST00000569891 TDO2P48775 406 aa7.11□□□□□ -1.27
CYLD-216ENST00000569891 MAPK8IP2Q13387 824 aaPredicted RBP7.11□□□□□ -1.27
CYLD-216ENST00000569891 CRNKL1Q9BZJ0 848 aaKnown RBP7.11□□□□□ -1.27
CYLD-216ENST00000569891 SCN7AQ01118 1682 aa7.11□□□□□ -1.27
CYLD-216ENST00000569891 CCDC196A0A1B0GTZ2 297 aa7.11□□□□□ -1.27
CYLD-216ENST00000569891 GOLGA6L4A6NEF3 574 aa7.11□□□□□ -1.27
CYLD-216ENST00000569891 AK2P54819 239 aa7.11□□□□□ -1.27
CYLD-216ENST00000569891 PPP2R5BQ15173 497 aa7.11□□□□□ -1.27
CYLD-216ENST00000569891 TXNRD1Q16881 649 aa7.11□□□□□ -1.27
CYLD-216ENST00000569891 RGS22Q8NE09 1264 aa7.11□□□□□ -1.27
CYLD-216ENST00000569891 WASF1Q92558 559 aa7.11□□□□□ -1.27
CYLD-216ENST00000569891 TMEM87BQ96K49 555 aa7.11□□□□□ -1.27
CYLD-216ENST00000569891 GPAA1O43292 621 aa7.1□□□□□ -1.27
CYLD-216ENST00000569891 TRIM37O94972 964 aa7.1□□□□□ -1.27
CYLD-216ENST00000569891 LETM1O95202 739 aaPredicted RBP7.1□□□□□ -1.27
CYLD-216ENST00000569891 GSE1Q14687 1217 aa7.1□□□□□ -1.27
CYLD-216ENST00000569891 CRAMP1Q96RY5 1269 aa7.1□□□□□ -1.27
CYLD-216ENST00000569891 NAP1L2Q9ULW6 460 aaPredicted RBP7.1□□□□□ -1.27
CYLD-216ENST00000569891 MAST3O60307 1309 aa7.1□□□□□ -1.27
CYLD-216ENST00000569891 SERPINB2P05120 415 aa7.1□□□□□ -1.27
CYLD-216ENST00000569891 NAA16Q6N069 864 aaPredicted RBP7.1□□□□□ -1.27
CYLD-216ENST00000569891 GIMAP6Q6P9H5 292 aa7.1□□□□□ -1.27
CYLD-216ENST00000569891 CLEC17AQ6ZS10 378 aa7.1□□□□□ -1.27
CYLD-216ENST00000569891 NOL8Q76FK4 1167 aaKnown RBP7.1□□□□□ -1.27
CYLD-216ENST00000569891 DZIP1Q86YF9 867 aaKnown RBP7.1□□□□□ -1.27
CYLD-216ENST00000569891 PATL2C9JE40 543 aaKnown RBP7.1□□□□□ -1.27
CYLD-216ENST00000569891 HSPD1P10809 573 aaKnown RBP7.1□□□□□ -1.27
CYLD-216ENST00000569891 PDE6AP16499 860 aa7.1□□□□□ -1.27
CYLD-216ENST00000569891 BAG6P46379 1132 aa7.1□□□□□ -1.27
CYLD-216ENST00000569891 PTH1RQ03431 593 aa7.1□□□□□ -1.27
CYLD-216ENST00000569891 PPP4R3BQ5MIZ7 849 aa7.1□□□□□ -1.27
CYLD-216ENST00000569891 CC2D2BQ6DHV5 1058 aa7.1□□□□□ -1.27
CYLD-216ENST00000569891 VGLL2Q8N8G2 317 aa7.1□□□□□ -1.27
CYLD-216ENST00000569891 FOXD4L1Q9NU39 408 aa7.1□□□□□ -1.27
CYLD-216ENST00000569891 GGA1Q9UJY5 639 aa7.1□□□□□ -1.27
CYLD-216ENST00000569891 VPS13CQ709C8 3753 aa7.1□□□□□ -1.27
CYLD-216ENST00000569891 MAGEB6P1A0A0J9YX57 407 aa7.1□□□□□ -1.27
CYLD-216ENST00000569891 ADORA1P30542 326 aa7.1□□□□□ -1.27
CYLD-216ENST00000569891 ATL3Q6DD88 541 aa7.1□□□□□ -1.27
CYLD-216ENST00000569891 TNPO1Q92973 898 aaKnown RBP7.1□□□□□ -1.27
CYLD-216ENST00000569891 ABCF2Q9UG63 623 aa7.1□□□□□ -1.27
CYLD-216ENST00000569891 ZNF804BA4D1E1 1349 aa7.1□□□□□ -1.27
CYLD-216ENST00000569891 A0A0C4DFX4 3053 aa7.09□□□□□ -1.27
CYLD-216ENST00000569891 TRIM29Q14134 588 aa7.09□□□□□ -1.27
CYLD-216ENST00000569891 PNPLA7Q6ZV29 1317 aa7.09□□□□□ -1.27
CYLD-216ENST00000569891 ZNF274Q96GC6 653 aaPredicted RBP7.09□□□□□ -1.27
CYLD-216ENST00000569891 DDX49Q9Y6V7 483 aaKnown RBP7.09□□□□□ -1.27
CYLD-216ENST00000569891 DUOX1Q9NRD9 1551 aa7.09□□□□□ -1.27
CYLD-216ENST00000569891 XBP1P17861 261 aa7.09□□□□□ -1.27
CYLD-216ENST00000569891 CYP7A1P22680 504 aa7.09□□□□□ -1.27
CYLD-216ENST00000569891 MCAMP43121 646 aa7.09□□□□□ -1.27
CYLD-216ENST00000569891 PHKA1P46020 1223 aa7.09□□□□□ -1.27
CYLD-216ENST00000569891 SUPT20HQ8NEM7 779 aa7.09□□□□□ -1.27
CYLD-216ENST00000569891 ZSCAN16Q9H4T2 348 aaPredicted RBP7.09□□□□□ -1.27
CYLD-216ENST00000569891 SEC31BQ9NQW1 1179 aa7.09□□□□□ -1.27
CYLD-216ENST00000569891 MINPP1Q9UNW1 487 aa7.09□□□□□ -1.27
CYLD-216ENST00000569891 TNRC6CQ9HCJ0 1690 aaKnown RBP7.09□□□□□ -1.27
CYLD-216ENST00000569891 ZNF532Q9HCE3 1301 aa7.09□□□□□ -1.27
CYLD-216ENST00000569891 TRAK2O60296 914 aa7.09□□□□□ -1.27
CYLD-216ENST00000569891 NFIXQ14938 502 aa7.09□□□□□ -1.27
CYLD-216ENST00000569891 LARP1BQ659C4 914 aaKnown RBP7.09□□□□□ -1.27
CYLD-216ENST00000569891 NFXL1Q6ZNB6 911 aa7.09□□□□□ -1.27
CYLD-216ENST00000569891 MFSD6Q6ZSS7 791 aa7.09□□□□□ -1.27
CYLD-216ENST00000569891 MAGEB6Q8N7X4 407 aa7.09□□□□□ -1.27
CYLD-216ENST00000569891 TTC14Q96N46 770 aa7.09□□□□□ -1.27
CYLD-216ENST00000569891 PALD1Q9ULE6 856 aa7.09□□□□□ -1.27
CYLD-216ENST00000569891 LRP5O75197 1615 aa7.09□□□□□ -1.27
CYLD-216ENST00000569891 STX6O43752 255 aa7.09□□□□□ -1.28
CYLD-216ENST00000569891 NPR1P16066 1061 aa7.09□□□□□ -1.28
CYLD-216ENST00000569891 AKAP17AQ02040 695 aaKnown RBP7.09□□□□□ -1.28
CYLD-216ENST00000569891 C15orf52Q6ZUT6 534 aaKnown RBP7.09□□□□□ -1.28
CYLD-216ENST00000569891 HELBQ8NG08 1087 aaPredicted RBP7.09□□□□□ -1.28
CYLD-216ENST00000569891 ZNF396Q96N95 335 aaPredicted RBP7.09□□□□□ -1.28
CYLD-216ENST00000569891 BRIP1Q9BX63 1249 aa7.09□□□□□ -1.28
CYLD-216ENST00000569891 ANO8Q9HCE9 1232 aaPredicted RBP7.09□□□□□ -1.28
CYLD-216ENST00000569891 TOMM22Q9NS69 142 aa7.09□□□□□ -1.28
CYLD-216ENST00000569891 RGS17Q9UGC6 210 aaPredicted RBP7.09□□□□□ -1.28
CYLD-216ENST00000569891 SRP68Q9UHB9 627 aaKnown RBP7.09□□□□□ -1.28
CYLD-216ENST00000569891 CCDC69A6NI79 296 aa7.08□□□□□ -1.28
CYLD-216ENST00000569891 KRT85P78386 507 aa7.08□□□□□ -1.28
CYLD-216ENST00000569891 CFAP45Q9UL16 551 aa7.08□□□□□ -1.28
CYLD-216ENST00000569891 SUGT1Q9Y2Z0 365 aa7.08□□□□□ -1.28
CYLD-216ENST00000569891 RCAN1P53805 252 aa7.08□□□□□ -1.28
CYLD-216ENST00000569891 PDE4BQ07343 736 aa7.08□□□□□ -1.28
CYLD-216ENST00000569891 IQCA1Q86XH1 822 aa7.08□□□□□ -1.28
CYLD-216ENST00000569891 FBXL16Q8N461 479 aa7.08□□□□□ -1.28
CYLD-216ENST00000569891 ESR2Q92731 530 aa7.08□□□□□ -1.28
CYLD-216ENST00000569891 UBAC1Q9BSL1 405 aa7.08□□□□□ -1.28
CYLD-216ENST00000569891 LDHBP07195 334 aaKnown RBP7.08□□□□□ -1.28
CYLD-216ENST00000569891 CALM1P0DP23 149 aa7.08□□□□□ -1.28
CYLD-216ENST00000569891 CALM2P0DP24 149 aa7.08□□□□□ -1.28
CYLD-216ENST00000569891 CALM3P0DP25 149 aa7.08□□□□□ -1.28
CYLD-216ENST00000569891 CCDC83Q8IWF9 413 aa7.08□□□□□ -1.28
CYLD-216ENST00000569891 TRIM22Q8IYM9 498 aa7.08□□□□□ -1.28
CYLD-216ENST00000569891 CCDC34Q96HJ3 373 aa7.08□□□□□ -1.28
CYLD-216ENST00000569891 SCAND2PQ9GZW5 306 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms